Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042745.1 Olea europaea HOM05D005573 ORTHO05D007161 6.9e-40 167.2 105 100.0
Oeu052069.1 Olea europaea HOM05D005573 ORTHO05D007161 1.8e-27 125.9 67 95.5
CAN.G551.66 Capsicum annuum HOM05D005573 ORTHO05D007161 1.2e-15 86.7 104 53.8
CAN.G65.126 Capsicum annuum HOM05D005573 ORTHO05D007161 1.2e-15 86.7 104 53.8
Migut.D01426 Erythranthe guttata HOM05D005573 ORTHO05D007161 1.6e-15 86.3 104 52.9
CAN.G1183.7 Capsicum annuum HOM05D005573 ORTHO05D007161 3.5e-15 85.1 104 52.9
Hma1.2p1_0248F.1_g102160 Hydrangea macrophylla HOM05D005573 ORTHO05D007161 3.5e-15 85.1 104 52.9
PGR111G0074 Punica granatum HOM05D005573 ORTHO05D007161 3.5e-15 85.1 104 52.9
Lj4g0013543 Lotus japonicus HOM05D005573 ORTHO05D007161 1.7e-14 82.8 91 56.0
DCAR_032486 Daucus carota HOM05D005573 ORTHO05D007161 2.2e-14 82.4 104 51.9
Nn1g10181 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.9e-14 82.0 104 51.9
Nn1g10183 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.9e-14 82.0 104 51.9
Nn2g13212 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.9e-14 82.0 104 51.9
Nn423s46610 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.9e-14 82.0 104 51.9
arahy.Tifrunner.gnm1.ann1.DMW7HF Arachis hypogaea HOM05D005573 ORTHO05D007161 3.8e-14 81.6 104 50.0
HanXRQChr02g0041471 Helianthus annuus HOM05D005573 ORTHO05D007161 3.8e-14 81.6 104 51.9
HanXRQChr02g0044961 Helianthus annuus HOM05D005573 ORTHO05D007161 3.8e-14 81.6 104 51.9
HanXRQChr07g0201021 Helianthus annuus HOM05D005573 ORTHO05D007161 3.8e-14 81.6 104 51.9
HanXRQChr08g0210291 Helianthus annuus HOM05D005573 ORTHO05D007161 3.8e-14 81.6 104 51.9
HanXRQChr10g0289201 Helianthus annuus HOM05D005573 ORTHO05D007161 3.8e-14 81.6 104 51.9
HanXRQChr11g0326731 Helianthus annuus HOM05D005573 ORTHO05D007161 3.8e-14 81.6 104 51.9
HanXRQChr13g0413641 Helianthus annuus HOM05D005573 ORTHO05D007161 3.8e-14 81.6 104 51.9
HanXRQChr13g0413711 Helianthus annuus HOM05D005573 ORTHO05D007161 3.8e-14 81.6 104 51.9
HanXRQChr13g0413781 Helianthus annuus HOM05D005573 ORTHO05D007161 3.8e-14 81.6 104 51.9
HanXRQChr13g0413861 Helianthus annuus HOM05D005573 ORTHO05D007161 3.8e-14 81.6 104 51.9
HanXRQChr13g0413931 Helianthus annuus HOM05D005573 ORTHO05D007161 3.8e-14 81.6 104 51.9
HanXRQCPg0579941 Helianthus annuus HOM05D005573 ORTHO05D007161 3.8e-14 81.6 104 51.9
Lsat_1_v5_gn_3_99201 Lactuca sativa HOM05D005573 ORTHO05D007161 3.8e-14 81.6 104 51.9
Eucgr.B02956 Eucalyptus grandis HOM05D005573 ORTHO05D007161 6.5e-14 80.9 104 50.0
Lj2P1237T91 Lonicera japonica HOM05D005573 ORTHO05D007161 6.5e-14 80.9 106 50.9
Lj2P1239T179 Lonicera japonica HOM05D005573 ORTHO05D007161 6.5e-14 80.9 106 50.9
Medtr4g051220 Medicago truncatula HOM05D005573 ORTHO05D007161 6.5e-14 80.9 104 51.0
SalBow1G4134 Salvia bowleyana HOM05D005573 ORTHO05D007161 6.5e-14 80.9 104 51.9
LjContig00318g0014176 Lotus japonicus HOM05D005573 ORTHO05D007161 5.5e-13 77.8 104 49.0
Nn6g33243 Nelumbo nucifera HOM05D005573 ORTHO05D007161 5.5e-13 77.8 104 50.0
Sed0002328 Sechium edule HOM05D005573 ORTHO05D007161 5.5e-13 77.8 104 50.0
Sed0008322 Sechium edule HOM05D005573 ORTHO05D007161 5.5e-13 77.8 104 50.0
PGSC0003DMG400024039 Solanum tuberosum HOM05D005573 ORTHO05D007161 5.5e-13 77.8 104 50.0
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 7.2e-13 77.4 104 50.0
PSO548G0019 Papaver somniferum HOM05D005573 ORTHO05D007161 9.5e-13 77.0 104 50.0
TWI60G0396 Tripterygium wilfordii HOM05D005573 ORTHO05D007161 1.6e-12 76.3 104 49.0
Gohir.A10G100366 Gossypium hirsutum HOM05D005573 ORTHO05D007161 6.1e-12 74.3 104 48.1
AL2G20730 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 1.0e-11 73.6 104 49.0
AL2G21420 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 1.0e-11 73.6 104 49.0
ATCG00380 Arabidopsis thaliana HOM05D005573 ORTHO05D007161 1.0e-11 73.6 104 49.0
A06p23260 Brassica napus HOM05D005573 ORTHO05D007161 1.0e-11 73.6 104 49.0
BNapus_Darmor_BZH_scaffold_287p00070 Brassica napus HOM05D005573 ORTHO05D007161 1.0e-11 73.6 104 49.0
BolSC45t60866H Brassica oleracea HOM05D005573 ORTHO05D007161 1.0e-11 73.6 104 49.0
BolSC45t60946H Brassica oleracea HOM05D005573 ORTHO05D007161 1.0e-11 73.6 104 49.0
BolSC46t60993H Brassica oleracea HOM05D005573 ORTHO05D007161 1.0e-11 73.6 104 49.0
BolSC46t61042H Brassica oleracea HOM05D005573 ORTHO05D007161 1.0e-11 73.6 104 49.0
BraA06t25428Z Brassica rapa HOM05D005573 ORTHO05D007161 1.0e-11 73.6 104 49.0
BraSC140t45578Z Brassica rapa HOM05D005573 ORTHO05D007161 1.0e-11 73.6 104 49.0
BraSC151t45711Z Brassica rapa HOM05D005573 ORTHO05D007161 1.0e-11 73.6 104 49.0
CARHR282030 Cardamine hirsuta HOM05D005573 ORTHO05D007161 1.0e-11 73.6 104 49.0
Thhalv10010766m.g Eutrema salsugineum HOM05D005573 ORTHO05D007161 1.0e-11 73.6 104 49.0
Gohir.A08G157500 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.0e-11 73.6 104 48.1
Oeu012806.1 Olea europaea HOM05D005573 ORTHO05D007161 1.4e-11 73.2 104 48.1
arahy.Tifrunner.gnm1.ann1.NAZW4C Arachis hypogaea HOM05D005573 ORTHO05D007161 1.8e-11 72.8 93 50.5
CAN.G1478.12 Capsicum annuum HOM05D005573 ORTHO05D007161 8.8e-11 70.5 93 50.5
Gohir.A07G163636 Gossypium hirsutum HOM05D005573 ORTHO05D007161 8.8e-11 70.5 104 47.1
Solyc09g015330.2 Solanum lycopersicum HOM05D005573 ORTHO05D007161 1.2e-10 70.1 104 47.1
Glyma.01G153400 Glycine max HOM05D005573 ORTHO05D007161 1.5e-10 69.7 96 45.8
Zm00001eb039080 Zea mays HOM05D005573 ORTHO05D007161 3.4e-10 68.6 104 45.2
Zm00001eb039210 Zea mays HOM05D005573 ORTHO05D007161 3.4e-10 68.6 104 45.2
Zm00001eb435020 Zea mays HOM05D005573 ORTHO05D007161 3.4e-10 68.6 104 45.2
Zm00001eb435220 Zea mays HOM05D005573 ORTHO05D007161 3.4e-10 68.6 104 45.2
Zm00001eb435420 Zea mays HOM05D005573 ORTHO05D007161 3.4e-10 68.6 104 45.2
Zm00001eb435680 Zea mays HOM05D005573 ORTHO05D007161 3.4e-10 68.6 104 45.2
Zm00001eb438350 Zea mays HOM05D005573 ORTHO05D007161 3.4e-10 68.6 104 45.2
Zm00001eb440990 Zea mays HOM05D005573 ORTHO05D007161 3.4e-10 68.6 104 45.2
BolSC49t61189H Brassica oleracea HOM05D005573 ORTHO05D007161 7.5e-10 67.4 105 47.6
Oeu041772.1 Olea europaea HOM05D005573 ORTHO05D007161 1.7e-09 66.2 31 96.8
Potri.013G163300 Populus trichocarpa HOM05D005573 ORTHO05D007161 1.7e-09 66.2 93 47.3
Lalb_Chr15g0080691 Lupinus albus HOM05D005573 ORTHO05D007161 3.7e-09 65.1 93 46.2
CAN.G100.47 Capsicum annuum HOM05D005573 ORTHO05D007161 6.3e-09 64.3 93 46.2
CAN.G129.6 Capsicum annuum HOM05D005573 ORTHO05D007161 1.4e-08 63.2 93 46.2
Solyc09g015310.3 Solanum lycopersicum HOM05D005573 ORTHO05D007161 1.6e-07 59.7 93 44.1
Gohir.D04G083800 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.7e-07 58.9 94 43.6
Nitab4.5_0006596g0030 Nicotiana tabacum HOM05D005573 ORTHO05D007161 4.5e-07 58.2 37 83.8
BraSC25t45875Z Brassica rapa HOM05D005573 ORTHO05D007161 7.7e-07 57.4 93 45.2
CAN.G653.3 Capsicum annuum HOM05D005573 ORTHO05D007161 2.9e-06 55.5 29 89.7
Nitab4.5_0000261g0250 Nicotiana tabacum HOM05D005573 ORTHO05D007161 2.9e-06 55.5 34 76.5
Oeu062838.1 Olea europaea HOM05D005573 ORTHO05D007161 3.8e-06 55.1 43 69.8
Zm00001eb231240 Zea mays HOM05D005573 ORTHO05D007161 3.8e-06 55.1 37 81.1
Migut.D01353 Erythranthe guttata HOM05D005573 ORTHO05D007161 5.0e-06 54.7 37 78.4
Solyc11g022620.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 6.6e-06 54.3 29 82.8
CiPaw.12G056900 Carya illinoinensis HOM05D005573 ORTHO05D007161 8.6e-06 53.9 37 78.4
Nn5g30925 Nelumbo nucifera HOM05D005573 ORTHO05D007161 8.6e-06 53.9 79 44.3
Phvul.008G150500 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 8.6e-06 53.9 34 70.6


User provided reference genes

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