Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041861.2 Olea europaea HOM05D005486 ORTHO05D007411 0.0e+00 1874.4 987 100.0
Oeu056581.1 Olea europaea HOM05D005486 ORTHO05D007411 7.1e-187 658.7 831 50.7
MSTRG.13492 Avicennia marina HOM05D005486 ORTHO05D007411 2.0e-152 544.3 1248 35.8
SalBow8G5042 Salvia bowleyana HOM05D005486 ORTHO05D007411 3.3e-115 420.6 1267 32.5
CSS0021505 Camellia sinensis var. sinensis HOM05D005486 ORTHO05D007411 4.3e-99 367.1 1197 30.2
Nitab4.5_0003073g0050 Nicotiana tabacum HOM05D005486 ORTHO05D007411 3.1e-97 360.9 1294 29.1
CAN.G184.62 Capsicum annuum HOM05D005486 ORTHO05D007411 2.9e-95 354.4 1236 28.8
SGA_v2.0_scaffold59G20635 Striga asiatica HOM05D005486 ORTHO05D007411 2.9e-95 354.4 1199 30.8
GSVIVG01012004001 Vitis vinifera HOM05D005486 ORTHO05D007411 7.1e-94 349.7 1192 29.6
Nitab4.5_0010558g0010 Nicotiana tabacum HOM05D005486 ORTHO05D007411 7.9e-93 346.3 1301 28.6
Sopen05g005890 Solanum pennellii HOM05D005486 ORTHO05D007411 1.0e-92 345.9 1273 29.7
PGSC0003DMG400025103 Solanum tuberosum HOM05D005486 ORTHO05D007411 8.7e-92 342.8 1272 29.6
Dinv16542 Davidia involucrata HOM05D005486 ORTHO05D007411 6.7e-84 316.6 941 30.6
Actinidia16599 Actinidia chinensis HOM05D005486 ORTHO05D007411 6.2e-82 310.1 806 34.2
Peaxi162Scf00198g00414 Petunia axillaris HOM05D005486 ORTHO05D007411 3.8e-79 300.8 945 30.7
Haze_11801 Corylus avellana HOM05D005486 ORTHO05D007411 8.4e-79 299.7 1340 26.4
vmacro10503 Vaccinium macrocarpon HOM05D005486 ORTHO05D007411 1.8e-76 292.0 1231 28.8
Potri.008G111100 Populus trichocarpa HOM05D005486 ORTHO05D007411 1.1e-75 289.3 1286 26.6
TAR629G0806 Trochodendron aralioides HOM05D005486 ORTHO05D007411 5.7e-75 287.0 1301 26.7
Migut.E00279 Erythranthe guttata HOM05D005486 ORTHO05D007411 4.8e-74 283.9 899 31.3
Cfa008789 Carpinus fangiana HOM05D005486 ORTHO05D007411 2.4e-73 281.6 1288 27.0
TAR622G0197 Trochodendron aralioides HOM05D005486 ORTHO05D007411 1.2e-69 269.2 1372 25.7
Nn3g17656 Nelumbo nucifera HOM05D005486 ORTHO05D007411 7.9e-69 266.5 1238 25.5
QL03p044642 Quercus lobata HOM05D005486 ORTHO05D007411 1.0e-68 266.2 1372 25.9
Thecc.02G364500 Theobroma cacao HOM05D005486 ORTHO05D007411 6.3e-66 256.9 1257 26.3
TWI79G0683 Tripterygium wilfordii HOM05D005486 ORTHO05D007411 1.4e-65 255.8 1252 25.9
Sabra10G0101300 Salix brachista HOM05D005486 ORTHO05D007411 1.2e-64 252.7 1279 26.8
Rhsim09G0115000 Rhododendron simsii HOM05D005486 ORTHO05D007411 1.5e-64 252.3 1356 25.7
Duzib251G0619 Durio zibethinus HOM05D005486 ORTHO05D007411 1.6e-61 242.3 1239 25.9
unitig_27.g25227 Utricularia gibba HOM05D005486 ORTHO05D007411 2.7e-61 241.5 917 29.2
Eucgr.G02380 Eucalyptus grandis HOM05D005486 ORTHO05D007411 1.4e-60 239.2 1278 25.4
Potri.010G132600 Populus trichocarpa HOM05D005486 ORTHO05D007411 1.4e-57 229.2 894 28.0
TWI31G0478 Tripterygium wilfordii HOM05D005486 ORTHO05D007411 1.5e-56 225.7 1202 25.0
Sabra08G0084000 Salix brachista HOM05D005486 ORTHO05D007411 3.4e-56 224.6 1006 25.6
Ciclev10030527m.g Citrus clementina HOM05D005486 ORTHO05D007411 4.5e-56 224.2 1298 25.0
MD16G1051000 Malus domestica HOM05D005486 ORTHO05D007411 2.2e-55 221.9 1390 24.0
Gohir.A12G173400 Gossypium hirsutum HOM05D005486 ORTHO05D007411 1.9e-54 218.8 1266 25.8
CiPaw.05G117000 Carya illinoinensis HOM05D005486 ORTHO05D007411 5.5e-54 217.2 604 32.8
Gorai.008G188400 Gossypium raimondii HOM05D005486 ORTHO05D007411 6.1e-53 213.8 1254 24.6
Prupe.1G301600 Prunus persica HOM05D005486 ORTHO05D007411 6.1e-53 213.8 1446 24.5
Gohir.D12G176000 Gossypium hirsutum HOM05D005486 ORTHO05D007411 5.1e-52 210.7 1254 24.6
CANSAT64G2054 Cannabis sativa HOM05D005486 ORTHO05D007411 2.0e-51 208.8 1260 25.4
DCAR_009846 Daucus carota HOM05D005486 ORTHO05D007411 1.3e-50 206.1 612 32.5
MD13G1050300 Malus domestica HOM05D005486 ORTHO05D007411 1.3e-50 206.1 1016 26.4
Atru.chr11.1428 Acer truncatum HOM05D005486 ORTHO05D007411 1.3e-47 196.1 1361 24.8
Manes.06G075700 Manihot esculenta HOM05D005486 ORTHO05D007411 2.2e-47 195.3 1302 24.8
PGR119G1261 Punica granatum HOM05D005486 ORTHO05D007411 7.2e-46 190.3 1226 26.8
Lalb_Chr17g0341801 Lupinus albus HOM05D005486 ORTHO05D007411 2.1e-45 188.7 1295 23.9
Solyc05g010100.4 Solanum lycopersicum HOM05D005486 ORTHO05D007411 8.0e-45 186.8 358 37.4
CsaV3_5G033800 Cucumis sativus L. HOM05D005486 ORTHO05D007411 5.7e-43 180.6 966 25.8
Hma1.2p1_1391F.1_g280160 Hydrangea macrophylla HOM05D005486 ORTHO05D007411 3.7e-42 177.9 495 32.5
ECA234G1298 Erigeron canadensis HOM05D005486 ORTHO05D007411 1.4e-41 176.0 1149 26.8
Lalb_Chr10g0099591 Lupinus albus HOM05D005486 ORTHO05D007411 3.1e-41 174.9 1297 23.6
ClCG00G003720 Citrullus lanatus HOM05D005486 ORTHO05D007411 7.0e-41 173.7 1288 24.8
ClCG05G023220 Citrullus lanatus HOM05D005486 ORTHO05D007411 7.0e-41 173.7 1288 24.8
Glyma.01G092400 Glycine max HOM05D005486 ORTHO05D007411 1.0e-39 169.9 1283 23.9
FAN22G2135 Fragaria x ananassa HOM05D005486 ORTHO05D007411 7.2e-38 163.7 1084 23.9
Ca_07880_v3 Cicer arietinum L. HOM05D005486 ORTHO05D007411 1.2e-37 162.9 1223 24.3
RcHm_v2.0_Chr4g0436391 Rosa chinensis HOM05D005486 ORTHO05D007411 2.1e-37 162.2 661 27.2
Sed0017603 Sechium edule HOM05D005486 ORTHO05D007411 6.1e-37 160.6 924 25.3
COL.COLO4_11242 Corchorus olitorius HOM05D005486 ORTHO05D007411 1.4e-36 159.5 1239 22.9
VMungo1215G0217 Vigna mungo HOM05D005486 ORTHO05D007411 1.5e-35 156.0 1282 23.9
Actinidia32431 Actinidia chinensis HOM05D005486 ORTHO05D007411 2.0e-35 155.6 563 30.6
Glyma.02G129800 Glycine max HOM05D005486 ORTHO05D007411 7.5e-35 153.7 1312 23.0
Psat2g089040 Pisum sativum HOM05D005486 ORTHO05D007411 9.8e-35 153.3 1282 23.7
PSO782G0099 Papaver somniferum HOM05D005486 ORTHO05D007411 8.3e-34 150.2 1039 25.1
Phvul.003G024300 Phaseolus vulgaris HOM05D005486 ORTHO05D007411 8.3e-34 150.2 1301 24.3
Medtr4g012000 Medicago truncatula HOM05D005486 ORTHO05D007411 3.1e-33 148.3 862 25.1
Lj2g0014013 Lotus japonicus HOM05D005486 ORTHO05D007411 1.0e-31 143.3 904 23.6
MBI16_g36049_MAGBIO Magnolia biondii HOM05D005486 ORTHO05D007411 2.9e-31 141.7 1019 22.5
Lj6A769T91 Lonicera japonica HOM05D005486 ORTHO05D007411 3.8e-31 141.4 92 68.5
MELO3C012197.2 Cucumis melo HOM05D005486 ORTHO05D007411 5.0e-31 141.0 918 25.5
TPR.G24201 Trifolium pratense HOM05D005486 ORTHO05D007411 6.5e-31 140.6 893 25.5
Sc14g0007640 Simmondsia chinensis HOM05D005486 ORTHO05D007411 1.9e-30 139.0 1127 23.6
FAN07G1378 Fragaria x ananassa HOM05D005486 ORTHO05D007411 1.6e-29 136.0 698 27.1
FAN12G0975 Fragaria x ananassa HOM05D005486 ORTHO05D007411 2.1e-29 135.6 667 25.8
FvH4_4g28440 Fragaria vesca HOM05D005486 ORTHO05D007411 1.4e-28 132.9 667 25.8
Cc11_g10960 Coffea canephora HOM05D005486 ORTHO05D007411 4.0e-28 131.3 92 66.3
Aqoxy3G03843 Aquilegia oxysepala HOM05D005486 ORTHO05D007411 6.8e-28 130.6 1127 22.4
AT1G68720 Arabidopsis thaliana HOM05D005486 ORTHO05D007411 4.4e-27 127.9 806 26.7
THA.LOC104808436 Tarenaya hassleriana HOM05D005486 ORTHO05D007411 2.2e-26 125.6 855 25.7
arahy.Tifrunner.gnm1.ann1.HYI70A Arachis hypogaea HOM05D005486 ORTHO05D007411 2.8e-26 125.2 862 24.2
PSO063G5162 Papaver somniferum HOM05D005486 ORTHO05D007411 2.4e-25 122.1 1036 23.7
BraA02t06590Z Brassica rapa HOM05D005486 ORTHO05D007411 3.1e-25 121.7 827 25.4
arahy.Tifrunner.gnm1.ann1.S5RRBC Arachis hypogaea HOM05D005486 ORTHO05D007411 7.0e-25 120.6 869 24.1
ATR0618G023 Amborella trichopoda HOM05D005486 ORTHO05D007411 9.2e-25 120.2 92 55.4
HanXRQChr16g0527001 Helianthus annuus HOM05D005486 ORTHO05D007411 3.5e-24 118.2 855 25.4
C02p25130 Brassica napus HOM05D005486 ORTHO05D007411 2.3e-23 115.5 805 25.0
CDE03G0168 Ceratophyllum demersum HOM05D005486 ORTHO05D007411 2.9e-23 115.2 92 62.0
A02p15280 Brassica napus HOM05D005486 ORTHO05D007411 1.9e-22 112.5 812 25.0
Thhalv10018020m.g Eutrema salsugineum HOM05D005486 ORTHO05D007411 2.5e-22 112.1 815 25.3
Hund05782 Selenicereus undatus HOM05D005486 ORTHO05D007411 4.3e-22 111.3 845 24.0
CARHR061530 Cardamine hirsuta HOM05D005486 ORTHO05D007411 1.2e-21 109.8 801 25.7
CDE04G2499 Ceratophyllum demersum HOM05D005486 ORTHO05D007411 8.0e-21 107.1 93 60.2
Dinv16543 Davidia involucrata HOM05D005486 ORTHO05D007411 6.8e-20 104.0 281 33.1
Sp5g23820 Schrenkiella parvula HOM05D005486 ORTHO05D007411 8.9e-20 103.6 591 25.2
FAN17G1167 Fragaria x ananassa HOM05D005486 ORTHO05D007411 1.7e-18 99.4 259 30.1
ECA233G2219 Erigeron canadensis HOM05D005486 ORTHO05D007411 4.9e-18 97.8 751 25.0
Hma1.2p1_1391F.1_g280150 Hydrangea macrophylla HOM05D005486 ORTHO05D007411 4.9e-18 97.8 267 36.0
Carub.0002s1526 Capsella rubella HOM05D005486 ORTHO05D007411 8.3e-18 97.1 741 25.5
Sc04g0006910 Simmondsia chinensis HOM05D005486 ORTHO05D007411 1.8e-17 95.9 1142 23.6
BcaB05g24405 Brassica carinata HOM05D005486 ORTHO05D007411 2.4e-17 95.5 733 25.1
Aa31sc12G40 Aethionema arabicum HOM05D005486 ORTHO05D007411 5.4e-17 94.4 86 57.0
Zm00001eb382160 Zea mays HOM05D005486 ORTHO05D007411 9.2e-17 93.6 93 51.6
HanXRQChr08g0214571 Helianthus annuus HOM05D005486 ORTHO05D007411 2.7e-16 92.0 96 45.8
Lsat_1_v5_gn_4_20360 Lactuca sativa HOM05D005486 ORTHO05D007411 2.7e-16 92.0 100 50.0
Ah.02g127300 Amaranthus hybridus HOM05D005486 ORTHO05D007411 3.5e-16 91.7 89 52.8
Cpa.g.sc1.245 Carica papaya HOM05D005486 ORTHO05D007411 4.6e-16 91.3 913 24.4
Cc11_g10920 Coffea canephora HOM05D005486 ORTHO05D007411 4.6e-16 91.3 179 35.2
Os06g0489500 Oryza sativa ssp. japonica HOM05D005486 ORTHO05D007411 4.6e-16 91.3 93 46.2
EL10Ac6g14546 Beta vulgaris HOM05D005486 ORTHO05D007411 3.9e-15 88.2 94 48.9
Lsat_1_v5_gn_8_38000 Lactuca sativa HOM05D005486 ORTHO05D007411 3.9e-15 88.2 452 27.4
BcaC03g14978 Brassica carinata HOM05D005486 ORTHO05D007411 8.6e-15 87.0 791 24.0
BolC2t08592H Brassica oleracea HOM05D005486 ORTHO05D007411 8.6e-15 87.0 791 24.0
AUR62002956 Chenopodium quinoa HOM05D005486 ORTHO05D007411 9.5e-14 83.6 95 45.3
THA.LOC104801666 Tarenaya hassleriana HOM05D005486 ORTHO05D007411 8.0e-13 80.5 53 67.9
AUR62007761 Chenopodium quinoa HOM05D005486 ORTHO05D007411 3.4e-11 75.1 601 24.3
FAN17G2383 Fragaria x ananassa HOM05D005486 ORTHO05D007411 1.3e-10 73.2 227 30.0
HanXRQChr08g0214581 Helianthus annuus HOM05D005486 ORTHO05D007411 3.2e-09 68.6 112 41.1
Pp3c9_12190 Physcomitrium patens HOM05D005486 ORTHO05D007411 2.5e-06 58.9 62 46.8


User provided reference genes

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