Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041302.1 Olea europaea HOM05D000921 ORTHO05D004153 6.3e-199 697.2 345 100.0
Migut.D00355 Erythranthe guttata HOM05D000921 ORTHO05D004153 3.4e-168 595.1 344 84.6
SalBow4G3326 Salvia bowleyana HOM05D000921 ORTHO05D004153 1.8e-161 572.8 344 79.9
Solyc09g065700.3 Solanum lycopersicum HOM05D000921 ORTHO05D004153 2.0e-160 569.3 344 80.8
Sopen09g027450 Solanum pennellii HOM05D000921 ORTHO05D004153 2.6e-160 568.9 344 80.8
Dinv32883 Davidia involucrata HOM05D000921 ORTHO05D004153 7.6e-160 567.4 344 80.8
Oeu002265.1 Olea europaea HOM05D000921 ORTHO05D004153 4.9e-159 564.7 344 82.8
Nitab4.5_0000459g0090 Nicotiana tabacum HOM05D000921 ORTHO05D004153 1.4e-158 563.1 344 79.9
Nitab4.5_0003424g0020 Nicotiana tabacum HOM05D000921 ORTHO05D004153 3.2e-158 562.0 344 79.7
Dinv22500 Davidia involucrata HOM05D000921 ORTHO05D004153 9.3e-158 560.5 344 79.7
Peaxi162Scf00259g00414 Petunia axillaris HOM05D000921 ORTHO05D004153 6.0e-157 557.8 344 79.7
SGA_v2.0_scaffold1G00535 Striga asiatica HOM05D000921 ORTHO05D004153 1.0e-156 557.0 346 78.9
CAN.G1072.6 Capsicum annuum HOM05D000921 ORTHO05D004153 3.9e-156 555.1 352 77.8
Cc01_g18990 Coffea canephora HOM05D000921 ORTHO05D004153 1.5e-155 553.1 344 79.4
TAR633G0413 Trochodendron aralioides HOM05D000921 ORTHO05D004153 4.3e-155 551.6 345 77.1
Actinidia19962 Actinidia chinensis HOM05D000921 ORTHO05D004153 5.6e-155 551.2 344 77.3
Hma1.2p1_0760F.1_g214090 Hydrangea macrophylla HOM05D000921 ORTHO05D004153 1.6e-154 549.7 345 78.3
CSS0032745 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004153 2.1e-154 549.3 344 77.9
vmacro02613 Vaccinium macrocarpon HOM05D000921 ORTHO05D004153 1.8e-153 546.2 344 77.0
CSS0042369 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004153 3.1e-153 545.4 344 77.0
Cpa.g.sc52.120 Carica papaya HOM05D000921 ORTHO05D004153 3.1e-153 545.4 344 76.5
CSS0010203 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004153 4.0e-153 545.0 344 77.0
Cfa006203 Carpinus fangiana HOM05D000921 ORTHO05D004153 4.0e-153 545.0 344 77.0
MSTRG.21525 Avicennia marina HOM05D000921 ORTHO05D004153 5.3e-153 544.7 344 77.0
Atru.chr5.1523 Acer truncatum HOM05D000921 ORTHO05D004153 9.0e-153 543.9 344 77.0
Haze_04641 Corylus avellana HOM05D000921 ORTHO05D004153 5.8e-152 541.2 344 76.7
Actinidia09105 Actinidia chinensis HOM05D000921 ORTHO05D004153 1.7e-151 539.7 344 76.2
DCAR_002700 Daucus carota HOM05D000921 ORTHO05D004153 1.7e-151 539.7 344 76.2
Rhsim13G0028700 Rhododendron simsii HOM05D000921 ORTHO05D004153 1.7e-151 539.7 344 76.5
QL12p042334 Quercus lobata HOM05D000921 ORTHO05D004153 4.9e-151 538.1 344 76.2
CANSAT25G1208 Cannabis sativa HOM05D000921 ORTHO05D004153 6.4e-151 537.7 344 76.7
Sabra05G0164600 Salix brachista HOM05D000921 ORTHO05D004153 7.1e-150 534.3 344 75.9
Potri.005G215400 Populus trichocarpa HOM05D000921 ORTHO05D004153 3.5e-149 531.9 344 75.9
RcHm_v2.0_Chr6g0289881 Rosa chinensis HOM05D000921 ORTHO05D004153 4.6e-149 531.6 344 75.9
ClCG09G007420 Citrullus lanatus HOM05D000921 ORTHO05D004153 1.8e-148 529.6 344 75.0
CsaV3_7G027700 Cucumis sativus L. HOM05D000921 ORTHO05D004153 1.8e-148 529.6 344 75.0
Duzib133G0456 Durio zibethinus HOM05D000921 ORTHO05D004153 1.8e-148 529.6 344 74.7
MD11G1278500 Malus domestica HOM05D000921 ORTHO05D004153 3.0e-148 528.9 344 76.2
MELO3C015783.2 Cucumis melo HOM05D000921 ORTHO05D004153 3.9e-148 528.5 344 74.7
CiPaw.07G086700 Carya illinoinensis HOM05D000921 ORTHO05D004153 5.1e-148 528.1 344 75.9
Lj2C1164G7 Lonicera japonica HOM05D000921 ORTHO05D004153 5.1e-148 528.1 344 76.2
Prupe.8G234500 Prunus persica HOM05D000921 ORTHO05D004153 5.1e-148 528.1 344 76.5
unitig_61.g26265 Utricularia gibba HOM05D000921 ORTHO05D004153 2.5e-147 525.8 344 75.9
COL.COLO4_09186 Corchorus olitorius HOM05D000921 ORTHO05D004153 3.3e-147 525.4 344 74.4
MD03G1257800 Malus domestica HOM05D000921 ORTHO05D004153 4.3e-147 525.0 344 75.6
PSO210G1924 Papaver somniferum HOM05D000921 ORTHO05D004153 5.6e-147 524.6 345 73.6
Manes.01G203800 Manihot esculenta HOM05D000921 ORTHO05D004153 7.4e-147 524.2 344 73.8
Glyma.02G144200 Glycine max HOM05D000921 ORTHO05D004153 1.6e-146 523.1 344 75.3
Sed0015319 Sechium edule HOM05D000921 ORTHO05D004153 2.1e-146 522.7 344 74.1
THA.LOC104825985 Tarenaya hassleriana HOM05D000921 ORTHO05D004153 2.8e-146 522.3 344 73.3
Thecc.01G271200 Theobroma cacao HOM05D000921 ORTHO05D004153 2.8e-146 522.3 344 74.7
Ca_09726_v3 Cicer arietinum L. HOM05D000921 ORTHO05D004153 3.6e-146 521.9 344 74.1
Duzib138G1896 Durio zibethinus HOM05D000921 ORTHO05D004153 6.2e-146 521.2 344 73.5
Eucgr.K03323 Eucalyptus grandis HOM05D000921 ORTHO05D004153 6.2e-146 521.2 344 74.7
AT1G03060 Arabidopsis thaliana HOM05D000921 ORTHO05D004153 8.1e-146 520.8 344 73.3
FAN15G1223 Fragaria x ananassa HOM05D000921 ORTHO05D004153 8.1e-146 520.8 344 73.8
FAN24G0847 Fragaria x ananassa HOM05D000921 ORTHO05D004153 1.1e-145 520.4 344 73.8
Gohir.D11G131000 Gossypium hirsutum HOM05D000921 ORTHO05D004153 1.1e-145 520.4 344 72.7
FAN20G3205 Fragaria x ananassa HOM05D000921 ORTHO05D004153 1.4e-145 520.0 344 74.1
Gorai.007G140000 Gossypium raimondii HOM05D000921 ORTHO05D004153 1.4e-145 520.0 344 72.7
Nn1g00513 Nelumbo nucifera HOM05D000921 ORTHO05D004153 1.4e-145 520.0 345 72.2
AUR62011970 Chenopodium quinoa HOM05D000921 ORTHO05D004153 1.8e-145 519.6 344 75.3
AL1G12520 Arabidopsis lyrata HOM05D000921 ORTHO05D004153 2.4e-145 519.2 344 73.3
FvH4_2g22920 Fragaria vesca HOM05D000921 ORTHO05D004153 3.1e-145 518.8 344 73.5
Glyma.10G030000 Glycine max HOM05D000921 ORTHO05D004153 3.1e-145 518.8 344 75.0
Phvul.007G175300 Phaseolus vulgaris HOM05D000921 ORTHO05D004153 3.1e-145 518.8 345 74.5
TWI12G1077 Tripterygium wilfordii HOM05D000921 ORTHO05D004153 3.1e-145 518.8 344 74.7
AUR62032282 Chenopodium quinoa HOM05D000921 ORTHO05D004153 4.0e-145 518.5 344 75.6
Lalb_Chr01g0019981 Lupinus albus HOM05D000921 ORTHO05D004153 4.0e-145 518.5 344 74.1
Carub.0001s0220 Capsella rubella HOM05D000921 ORTHO05D004153 6.9e-145 517.7 344 72.7
Lj5g0027434 Lotus japonicus HOM05D000921 ORTHO05D004153 6.9e-145 517.7 344 73.8
Psat6g058840 Pisum sativum HOM05D000921 ORTHO05D004153 9.0e-145 517.3 344 73.5
Potri.002G047700 Populus trichocarpa HOM05D000921 ORTHO05D004153 9.0e-145 517.3 344 74.7
Sabra02G0038900 Salix brachista HOM05D000921 ORTHO05D004153 2.0e-144 516.2 344 73.8
BcaB03g15744 Brassica carinata HOM05D000921 ORTHO05D004153 4.5e-144 515.0 344 73.0
CARHR002410 Cardamine hirsuta HOM05D000921 ORTHO05D004153 4.5e-144 515.0 344 72.7
Thhalv10006519m.g Eutrema salsugineum HOM05D000921 ORTHO05D004153 4.5e-144 515.0 344 72.7
Medtr1g071260 Medicago truncatula HOM05D000921 ORTHO05D004153 4.5e-144 515.0 344 73.3
TPR.G34892 Trifolium pratense HOM05D000921 ORTHO05D004153 5.8e-144 514.6 344 73.5
EL10Ac5g10491 Beta vulgaris HOM05D000921 ORTHO05D004153 1.7e-143 513.1 344 74.7
A10p01690 Brassica napus HOM05D000921 ORTHO05D004153 2.2e-143 512.7 344 72.4
BraA10t42445Z Brassica rapa HOM05D000921 ORTHO05D004153 2.2e-143 512.7 344 72.4
arahy.Tifrunner.gnm1.ann1.BY50EL Arachis hypogaea HOM05D000921 ORTHO05D004153 8.4e-143 510.8 344 72.4
HanXRQChr01g0005671 Helianthus annuus HOM05D000921 ORTHO05D004153 8.4e-143 510.8 344 73.0
Lalb_Chr06g0162771 Lupinus albus HOM05D000921 ORTHO05D004153 1.9e-142 509.6 344 73.3
TWI18G0154 Tripterygium wilfordii HOM05D000921 ORTHO05D004153 3.2e-142 508.8 344 73.0
ECA248G3113 Erigeron canadensis HOM05D000921 ORTHO05D004153 4.2e-142 508.4 344 73.0
PGR044G0864 Punica granatum HOM05D000921 ORTHO05D004153 4.2e-142 508.4 345 72.2
Lsat_1_v5_gn_5_185441 Lactuca sativa HOM05D000921 ORTHO05D004153 5.5e-142 508.1 345 72.8
Nn6g33594 Nelumbo nucifera HOM05D000921 ORTHO05D004153 9.3e-142 507.3 345 71.9
Sc17g0001140 Simmondsia chinensis HOM05D000921 ORTHO05D004153 1.6e-141 506.5 344 73.0
A09p68370 Brassica napus HOM05D000921 ORTHO05D004153 3.5e-141 505.4 344 70.9
C05p01680 Brassica napus HOM05D000921 ORTHO05D004153 3.5e-141 505.4 344 71.5
BolC5t28947H Brassica oleracea HOM05D000921 ORTHO05D004153 3.5e-141 505.4 344 71.5
BolC8t52810H Brassica oleracea HOM05D000921 ORTHO05D004153 3.5e-141 505.4 344 70.9
BraA09t42173Z Brassica rapa HOM05D000921 ORTHO05D004153 3.5e-141 505.4 344 70.9
C08p52940 Brassica napus HOM05D000921 ORTHO05D004153 6.0e-141 504.6 344 70.9
Gorai.004G217600 Gossypium raimondii HOM05D000921 ORTHO05D004153 6.0e-141 504.6 344 71.2
Gohir.A11G125600 Gossypium hirsutum HOM05D000921 ORTHO05D004153 7.9e-141 504.2 344 71.5
Gohir.A08G187300 Gossypium hirsutum HOM05D000921 ORTHO05D004153 1.0e-140 503.8 344 71.5
Aa31LG1G9470 Aethionema arabicum HOM05D000921 ORTHO05D004153 1.8e-140 503.1 344 71.5
Ah.11g050210 Amaranthus hybridus HOM05D000921 ORTHO05D004153 1.8e-140 503.1 344 73.0
HanXRQChr04g0113931 Helianthus annuus HOM05D000921 ORTHO05D004153 1.8e-140 503.1 335 73.7
Gohir.D08G205600 Gossypium hirsutum HOM05D000921 ORTHO05D004153 5.1e-140 501.5 344 70.9
Aqoxy5G00390 Aquilegia oxysepala HOM05D000921 ORTHO05D004153 1.1e-139 500.4 344 70.9
Gorai.004G056400 Gossypium raimondii HOM05D000921 ORTHO05D004153 2.5e-139 499.2 344 70.3
Hund09551 Selenicereus undatus HOM05D000921 ORTHO05D004153 7.4e-139 497.7 344 71.2
ATR0665G073 Amborella trichopoda HOM05D000921 ORTHO05D004153 1.6e-138 496.5 344 69.8
Gohir.D08G055600 Gossypium hirsutum HOM05D000921 ORTHO05D004153 1.1e-137 493.8 344 69.8
AL6G50380 Arabidopsis lyrata HOM05D000921 ORTHO05D004153 4.0e-137 491.9 344 69.8
Hund02865 Selenicereus undatus HOM05D000921 ORTHO05D004153 3.4e-136 488.8 344 70.9
arahy.Tifrunner.gnm1.ann1.EGZY1N Arachis hypogaea HOM05D000921 ORTHO05D004153 7.6e-136 487.6 344 70.1
arahy.Tifrunner.gnm1.ann1.IAH9UB Arachis hypogaea HOM05D000921 ORTHO05D004153 7.6e-136 487.6 344 70.1
Sc05g0001320 Simmondsia chinensis HOM05D000921 ORTHO05D004153 1.0e-135 487.3 343 70.0
BcaB01g02482 Brassica carinata HOM05D000921 ORTHO05D004153 2.9e-135 485.7 344 69.5
HanXRQChr06g0177821 Helianthus annuus HOM05D000921 ORTHO05D004153 2.9e-135 485.7 344 70.1
BraA03t12271Z Brassica rapa HOM05D000921 ORTHO05D004153 6.5e-135 484.6 344 69.5
C03p37700 Brassica napus HOM05D000921 ORTHO05D004153 5.5e-134 481.5 344 69.2
BolC3t16059H Brassica oleracea HOM05D000921 ORTHO05D004153 5.5e-134 481.5 344 69.2
CARHR250960 Cardamine hirsuta HOM05D000921 ORTHO05D004153 5.5e-134 481.5 344 68.9
A03p30920 Brassica napus HOM05D000921 ORTHO05D004153 7.1e-134 481.1 344 69.2
AT4G02660 Arabidopsis thaliana HOM05D000921 ORTHO05D004153 1.6e-133 479.9 343 69.4
Lsat_1_v5_gn_8_93941 Lactuca sativa HOM05D000921 ORTHO05D004153 4.6e-133 478.4 345 70.1
BcaC01g06740 Brassica carinata HOM05D000921 ORTHO05D004153 6.0e-133 478.0 344 68.6
Carub.0006s3446 Capsella rubella HOM05D000921 ORTHO05D004153 3.0e-132 475.7 344 67.7
ECA236G3737 Erigeron canadensis HOM05D000921 ORTHO05D004153 7.4e-131 471.1 342 67.5
Zm00001eb056940 Zea mays HOM05D000921 ORTHO05D004153 1.0e-127 460.7 345 64.9
BcaC07g42269 Brassica carinata HOM05D000921 ORTHO05D004153 6.5e-127 458.0 344 66.3
PSO461G0055 Papaver somniferum HOM05D000921 ORTHO05D004153 6.7e-124 448.0 345 64.3
SEGI_18450 Sequoiadendron giganteum HOM05D000921 ORTHO05D004153 1.1e-123 447.2 346 63.0
FAN27G1722 Fragaria x ananassa HOM05D000921 ORTHO05D004153 4.1e-121 438.7 288 73.6
SHI10018 Sapria himalayana HOM05D000921 ORTHO05D004153 9.1e-121 437.6 345 62.9
Lj1C56G6 Lonicera japonica HOM05D000921 ORTHO05D004153 2.5e-118 429.5 346 67.1
HPP92_021305 Vanilla planifolia HOM05D000921 ORTHO05D004153 4.4e-115 418.7 344 61.3
CDE04G0357 Ceratophyllum demersum HOM05D000921 ORTHO05D004153 4.1e-113 412.1 344 59.6
Sp1g02060 Schrenkiella parvula HOM05D000921 ORTHO05D004153 5.5e-110 401.7 344 60.5
GSVIVG01003123001 Vitis vinifera HOM05D000921 ORTHO05D004153 2.4e-105 386.3 344 59.9
CDE10G0697 Ceratophyllum demersum HOM05D000921 ORTHO05D004153 2.5e-102 376.3 344 54.9
Sp6g02580 Schrenkiella parvula HOM05D000921 ORTHO05D004153 1.6e-101 373.6 344 56.4
Pp3c5_2890 Physcomitrium patens HOM05D000921 ORTHO05D004153 4.0e-100 369.0 346 52.9
Pp3c5_2897 Physcomitrium patens HOM05D000921 ORTHO05D004153 4.0e-100 369.0 346 52.9
Mapoly0082s0083 Marchantia polymorpha HOM05D000921 ORTHO05D004153 2.6e-99 366.3 345 53.6
arahy.Tifrunner.gnm1.ann1.0T0464 Arachis hypogaea HOM05D000921 ORTHO05D004153 5.7e-99 365.2 344 57.0
Pp3c6_26100 Physcomitrium patens HOM05D000921 ORTHO05D004153 5.7e-99 365.2 347 51.9
AagrBONN_evm.TU.Sc2ySwM_117.1900 Anthoceros agrestis HOM05D000921 ORTHO05D004153 5.3e-97 358.6 335 53.4
SMO236G0048 Selaginella moellendorffii HOM05D000921 ORTHO05D004153 1.6e-85 320.5 344 47.7
Pp3c6_5700 Physcomitrium patens HOM05D000921 ORTHO05D004153 1.8e-84 317.0 345 46.4
Pp3c6_5706 Physcomitrium patens HOM05D000921 ORTHO05D004153 1.8e-84 317.0 345 46.4
CAN.G1355.6 Capsicum annuum HOM05D000921 ORTHO05D004153 2.9e-74 283.1 186 74.7
Pp3c16_11700 Physcomitrium patens HOM05D000921 ORTHO05D004153 3.5e-72 276.2 343 45.5
Pp3c16_11705 Physcomitrium patens HOM05D000921 ORTHO05D004153 3.5e-72 276.2 343 45.5
Hund09555 Selenicereus undatus HOM05D000921 ORTHO05D004153 2.5e-70 270.0 341 46.6
AUR62011967 Chenopodium quinoa HOM05D000921 ORTHO05D004153 2.9e-66 256.5 338 42.6
AUR62032279 Chenopodium quinoa HOM05D000921 ORTHO05D004153 1.1e-65 254.6 341 42.2
CBR_g29440 Chara braunii HOM05D000921 ORTHO05D004153 8.1e-37 158.7 334 33.2
Ciclev10018426m.g Citrus clementina HOM05D000921 ORTHO05D004153 1.5e-30 137.9 153 54.2
Lsat_1_v5_gn_4_20061 Lactuca sativa HOM05D000548 ORTHO05D015037 5.3e-28 129.4 99 70.7
Nn1g00511 Nelumbo nucifera HOM05D000921 ORTHO05D015037 1.5e-27 127.9 90 71.1
Cfa021767 Carpinus fangiana HOM05D000921 ORTHO05D004153 1.0e-10 72.0 228 26.3
SMO169G0155 Selaginella moellendorffii HOM05D000921 ORTHO05D004782 4.3e-06 56.6 155 28.4


User provided reference genes

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