Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 6.3e-199 697.2 344 100.0
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 1.4e-174 616.3 341 90.0
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 2.0e-160 569.3 346 79.8
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 1.6e-157 559.7 346 81.2
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 1.0e-156 557.0 336 79.8
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 1.6e-154 549.7 344 79.4
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 4.2e-150 535.0 339 76.7
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 3.5e-149 531.9 332 78.9
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 4.6e-149 531.6 361 73.7
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 7.3e-147 524.2 341 76.5
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 3.6e-146 521.9 331 77.6
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 3.6e-146 521.9 325 78.2
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.1e-145 520.4 329 76.6
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 1.8e-145 519.6 325 77.8
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 3.1e-145 518.8 333 76.6
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 3.1e-145 518.8 360 72.8
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 5.3e-145 518.1 340 75.0
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 1.5e-144 516.5 325 77.2
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 2.6e-144 515.8 332 75.3
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 2.6e-144 515.8 333 76.0
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 3.4e-144 515.4 337 76.3
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 4.4e-144 515.0 334 74.3
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 7.6e-144 514.2 326 77.3
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 1.7e-143 513.1 341 74.8
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 1.7e-143 513.1 330 76.4
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 4.9e-143 511.5 329 76.0
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 1.1e-142 510.4 328 75.6
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 1.1e-142 510.4 324 76.9
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 1.1e-142 510.4 328 77.7
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.4e-142 510.0 326 77.0
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 1.9e-142 509.6 325 76.6
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 3.2e-142 508.8 326 75.8
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 4.2e-142 508.4 326 76.7
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 5.4e-142 508.1 326 75.8
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 9.3e-142 507.3 325 76.6
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 9.3e-142 507.3 332 75.3
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 9.3e-142 507.3 332 75.3
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 1.6e-141 506.5 334 72.8
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 1.6e-141 506.5 325 76.0
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 1.6e-141 506.5 333 75.1
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 2.1e-141 506.1 331 74.6
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 2.7e-141 505.8 333 75.1
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 6.0e-141 504.6 355 70.4
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 1.3e-140 503.4 330 76.1
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 1.7e-140 503.1 329 75.4
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 3.9e-140 501.9 328 73.8
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 3.9e-140 501.9 327 74.9
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 5.1e-140 501.5 326 74.5
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 8.7e-140 500.7 345 71.9
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.9e-139 499.6 323 76.5
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 3.3e-139 498.8 322 75.8
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 4.3e-139 498.4 326 75.2
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 5.6e-139 498.0 331 73.4
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 1.3e-138 496.9 350 69.1
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 1.6e-138 496.5 341 74.2
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 2.8e-138 495.7 318 77.0
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 2.8e-138 495.7 323 75.5
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 1.1e-137 493.8 329 74.2
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 1.4e-137 493.4 369 68.8
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 3.1e-137 492.3 328 72.9
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 5.3e-137 491.5 335 71.3
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 2.6e-136 489.2 311 77.8
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 2.6e-136 489.2 340 71.5
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 3.4e-136 488.8 325 73.5
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 7.6e-136 487.6 331 71.3
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 9.9e-136 487.3 343 70.8
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 1.3e-135 486.9 326 73.6
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 1.7e-135 486.5 328 73.5
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 1.7e-135 486.5 328 73.8
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 2.2e-135 486.1 341 72.7
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 6.4e-135 484.6 325 72.6
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 8.4e-135 484.2 331 72.8
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 1.9e-134 483.0 322 74.8
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 3.2e-134 482.3 308 76.9
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 3.2e-134 482.3 326 71.5
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 4.2e-134 481.9 323 71.8
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 5.4e-134 481.5 340 70.6
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 9.3e-134 480.7 330 70.6
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 1.2e-133 480.3 332 71.7
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 1.6e-133 479.9 327 71.6
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 2.1e-133 479.6 323 71.8
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 2.1e-133 479.6 334 72.2
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 4.6e-133 478.4 322 71.7
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 4.6e-133 478.4 324 71.9
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 4.6e-133 478.4 340 70.3
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 4.6e-133 478.4 328 71.3
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 6.0e-133 478.0 323 71.2
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 6.0e-133 478.0 325 71.1
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 6.0e-133 478.0 315 74.9
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 7.9e-133 477.6 310 74.8
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 1.0e-132 477.2 324 71.6
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 1.0e-132 477.2 327 71.6
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 1.8e-132 476.5 328 71.6
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 2.3e-132 476.1 323 71.5
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 3.9e-132 475.3 326 71.2
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 5.1e-132 474.9 324 71.3
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 6.7e-132 474.6 327 71.3
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 1.1e-131 473.8 324 71.0
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 1.5e-131 473.4 324 71.0
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 1.9e-131 473.0 324 71.3
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 2.5e-131 472.6 328 70.7
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 3.3e-131 472.2 329 68.4
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 3.3e-131 472.2 326 72.4
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 9.6e-131 470.7 322 71.1
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 9.6e-131 470.7 326 71.5
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 2.8e-130 469.2 359 66.6
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 1.1e-129 467.2 323 69.7
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 1.8e-129 466.5 331 70.7
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 2.4e-129 466.1 326 71.2
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 2.4e-129 466.1 325 71.1
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 4.0e-129 465.3 308 74.0
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 4.0e-129 465.3 325 72.0
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 3.4e-128 462.2 329 69.6
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.3e-127 460.3 311 74.0
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 3.8e-127 458.8 326 69.6
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 6.5e-127 458.0 338 68.0
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 5.5e-126 454.9 395 60.8
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 6.0e-125 451.4 328 69.2
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 5.1e-124 448.4 324 69.4
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 6.7e-124 448.0 327 69.4
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 5.7e-123 444.9 530 47.5
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 4.1e-121 438.7 328 67.7
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 2.2e-119 433.0 311 70.7
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 1.1e-118 430.6 340 65.6
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 1.2e-117 427.2 264 77.3
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 4.8e-114 415.2 302 67.5
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 7.9e-109 397.9 252 76.2
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 5.7e-107 391.7 326 62.3
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 5.7e-107 391.7 265 72.5
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 1.3e-106 390.6 340 60.3
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 1.7e-103 380.2 273 71.1
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 1.1e-94 350.9 326 53.4
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 1.1e-94 350.9 317 55.2
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 1.0e-92 344.4 206 79.1
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 5.2e-92 342.0 283 64.3
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 2.6e-91 339.7 227 73.1
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 7.5e-91 338.2 211 73.0
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 6.3e-90 335.1 206 80.1
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 4.5e-88 328.9 290 55.2
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 3.6e-85 319.3 267 64.0
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 1.4e-84 317.4 217 72.8
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 2.2e-82 310.1 207 72.0
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 3.6e-69 266.2 387 40.1
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 5.7e-67 258.8 162 77.2
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 4.9e-66 255.8 162 75.9
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 1.2e-64 251.1 163 75.5
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 4.3e-62 242.7 172 71.5
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 5.6e-62 242.3 213 60.1
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 2.7e-56 223.4 161 68.9
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 2.7e-56 223.4 164 70.1
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 6.2e-53 212.2 256 46.9
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 1.6e-45 187.6 339 38.9
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 8.9e-44 181.8 121 71.1
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 2.3e-39 167.2 193 48.2
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 4.0e-36 156.4 121 67.8
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 3.1e-28 130.2 254 34.3
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 2.2e-26 124.0 381 29.9
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 2.9e-26 123.6 99 58.6
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 2.4e-25 120.6 251 32.7
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.7e-23 114.4 128 48.4
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 5.1e-23 112.8 62 83.9
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 4.0e-20 103.2 64 76.6
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 6.4e-18 95.9 86 57.0
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 1.6e-16 91.3 121 44.6
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 1.6e-16 91.3 57 75.4
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 9.6e-14 82.0 56 73.2
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 2.8e-13 80.5 52 71.2
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 3.5e-08 63.5 112 36.6
Gohir.D08G092932 Gossypium hirsutum HOM05D004315 ORTHO05D217518 9.6e-06 55.5 59 49.2


User provided reference genes

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