Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040654.1 Olea europaea HOM05D004826 ORTHO05D006367 1.3e-43 179.5 101 100.0
Oeu025741.1 Olea europaea HOM05D004826 ORTHO05D006367 3.3e-23 111.7 88 75.0
SalBow4G1440 Salvia bowleyana HOM05D004826 ORTHO05D006367 9.4e-18 93.6 96 59.4
MSTRG.18248 Avicennia marina HOM05D004826 ORTHO05D006367 2.7e-17 92.0 96 60.4
Cc01_g19270 Coffea canephora HOM05D004826 ORTHO05D006367 8.2e-14 80.5 87 60.9
Lj1A48T56 Lonicera japonica HOM05D004826 ORTHO05D006367 1.1e-13 80.1 96 49.0
Solyc06g008700.3 Solanum lycopersicum HOM05D004826 ORTHO05D006367 2.4e-13 79.0 96 47.9
GSVIVG01001175001 Vitis vinifera HOM05D004826 ORTHO05D006367 2.4e-13 79.0 96 54.2
HanXRQChr04g0118961 Helianthus annuus HOM05D004826 ORTHO05D006367 3.1e-13 78.6 87 55.2
ECA236G2315 Erigeron canadensis HOM05D004826 ORTHO05D006367 1.6e-12 76.3 96 50.0
Sopen06g003480 Solanum pennellii HOM05D004826 ORTHO05D006367 3.5e-12 75.1 96 46.9
Dinv34775 Davidia involucrata HOM05D004826 ORTHO05D006367 4.5e-12 74.7 96 49.0
Hma1.2p1_0822F.1_g224300 Hydrangea macrophylla HOM05D004826 ORTHO05D006367 4.5e-12 74.7 96 47.9
Hma1.2p1_0822F.1_g224310 Hydrangea macrophylla HOM05D004826 ORTHO05D006367 4.5e-12 74.7 96 47.9
CANSAT25G1434 Cannabis sativa HOM05D004826 ORTHO05D006367 5.9e-12 74.3 99 50.5
Haze_04685 Corylus avellana HOM05D004826 ORTHO05D006367 5.9e-12 74.3 96 47.9
PGSC0003DMG400005331 Solanum tuberosum HOM05D004826 ORTHO05D006367 1.7e-11 72.8 96 46.9
SGA_v2.0_scaffold1G00502 Striga asiatica HOM05D004826 ORTHO05D006367 1.7e-11 72.8 96 50.0
TAR633G1509 Trochodendron aralioides HOM05D004826 ORTHO05D006367 1.7e-11 72.8 99 46.5
COL.COLO4_09064 Corchorus olitorius HOM05D004826 ORTHO05D003095 2.2e-11 72.4 96 46.9
Peaxi162Scf00572g00217 Petunia axillaris HOM05D004826 ORTHO05D006367 2.9e-11 72.0 96 49.0
CSS0030159 Camellia sinensis var. sinensis HOM05D004826 ORTHO05D006367 6.5e-11 70.9 96 49.0
CSS0031998 Camellia sinensis var. sinensis HOM05D004826 ORTHO05D006367 6.5e-11 70.9 96 49.0
Migut.D00320 Erythranthe guttata HOM05D004826 ORTHO05D006367 6.5e-11 70.9 101 46.5
vmacro14910 Vaccinium macrocarpon HOM05D004826 ORTHO05D006367 6.5e-11 70.9 96 46.9
Actinidia24908 Actinidia chinensis HOM05D004826 ORTHO05D006367 1.5e-10 69.7 96 45.8
Actinidia21127 Actinidia chinensis HOM05D004826 ORTHO05D006367 2.5e-10 68.9 99 45.5
Gohir.A12G004300 Gossypium hirsutum HOM05D004826 ORTHO05D006367 2.5e-10 68.9 99 44.4
Gorai.008G003800 Gossypium raimondii HOM05D004826 ORTHO05D006367 2.5e-10 68.9 99 44.4
Thecc.01G275300 Theobroma cacao HOM05D004826 ORTHO05D006367 3.2e-10 68.6 96 44.8
Gohir.D12G004000 Gossypium hirsutum HOM05D004826 ORTHO05D006367 4.2e-10 68.2 99 44.4
MD11G1282600 Malus domestica HOM05D004826 ORTHO05D006367 7.2e-10 67.4 96 42.7
Sed0001689 Sechium edule HOM05D004826 ORTHO05D006367 2.7e-09 65.5 96 41.7
DCAR_002720 Daucus carota HOM05D004826 ORTHO05D006367 3.6e-09 65.1 96 46.9
MD03G1261900 Malus domestica HOM05D004826 ORTHO05D006367 3.6e-09 65.1 99 44.4
Manes.05G079700 Manihot esculenta HOM05D004826 ORTHO05D006367 3.6e-09 65.1 87 48.3
Potri.005G211600 Populus trichocarpa HOM05D004826 ORTHO05D006367 4.7e-09 64.7 95 41.1
Hund02828 Selenicereus undatus HOM05D004826 ORTHO05D006367 4.7e-09 64.7 96 45.8
Hund27937 Selenicereus undatus HOM05D004826 ORTHO05D006367 4.7e-09 64.7 96 45.8
arahy.Tifrunner.gnm1.ann1.HM2HLZ Arachis hypogaea HOM05D004826 ORTHO05D006367 6.1e-09 64.3 96 45.8
CiPaw.07G089800 Carya illinoinensis HOM05D004826 ORTHO05D006367 6.1e-09 64.3 96 43.8
Rhsim01G0273300 Rhododendron simsii HOM05D004826 ORTHO05D006367 6.1e-09 64.3 96 42.7
TWI75G1621 Tripterygium wilfordii HOM05D004826 ORTHO05D006367 6.1e-09 64.3 96 50.0
arahy.Tifrunner.gnm1.ann1.ZSCD81 Arachis hypogaea HOM05D004826 ORTHO05D006367 1.4e-08 63.2 96 44.8
ClCG09G007220 Citrullus lanatus HOM05D004826 ORTHO05D006367 1.4e-08 63.2 96 43.8
Lalb_Chr01g0020091 Lupinus albus HOM05D004826 ORTHO05D006367 1.4e-08 63.2 96 44.8
Lj1g0007005 Lotus japonicus HOM05D004826 ORTHO05D006367 2.3e-08 62.4 99 47.5
RcHm_v2.0_Chr6g0290561 Rosa chinensis HOM05D004826 ORTHO05D006367 3.0e-08 62.0 87 46.0
Duzib138G1281 Durio zibethinus HOM05D004826 ORTHO05D006367 4.0e-08 61.6 96 40.6
QL12p021024 Quercus lobata HOM05D004826 ORTHO05D006367 5.2e-08 61.2 97 43.3
Sabra05G0161700 Salix brachista HOM05D004826 ORTHO05D006367 5.2e-08 61.2 96 40.6
PSO210G5512 Papaver somniferum HOM05D004826 ORTHO05D006367 6.7e-08 60.8 99 42.4
PSO832G3843 Papaver somniferum HOM05D004826 ORTHO05D006367 6.7e-08 60.8 99 43.4
Eucgr.K03351 Eucalyptus grandis HOM05D004826 ORTHO05D006367 8.8e-08 60.5 96 43.8
Prupe.8G238200 Prunus persica HOM05D004826 ORTHO05D006367 1.1e-07 60.1 96 40.6
Glyma.03G155900 Glycine max HOM05D004826 ORTHO05D006367 2.0e-07 59.3 97 43.3
CsaV3_7G027950 Cucumis sativus L. HOM05D004826 ORTHO05D006367 3.3e-07 58.5 96 43.8
Nitab4.5_0025955g0010 Nicotiana tabacum HOM05D004826 ORTHO05D006367 3.3e-07 58.5 66 48.5
Cpa.g.sc2545.1 Carica papaya HOM05D004826 ORTHO05D006367 7.5e-07 57.4 96 40.6
AUR62032326 Chenopodium quinoa HOM05D004826 ORTHO05D006367 7.5e-07 57.4 96 39.6
Glyma.19G158200 Glycine max HOM05D004826 ORTHO05D006367 9.7e-07 57.0 97 41.2
Psat3g063080 Pisum sativum HOM05D004826 ORTHO05D006367 9.7e-07 57.0 99 44.4
PGR044G1874 Punica granatum HOM05D004826 ORTHO05D006367 9.7e-07 57.0 99 41.4
Phvul.001G153300 Phaseolus vulgaris HOM05D004826 ORTHO05D006367 1.3e-06 56.6 96 41.7
EL10Ac5g10541 Beta vulgaris HOM05D004826 ORTHO05D006367 1.7e-06 56.2 96 39.6
FAN20G2615 Fragaria x ananassa HOM05D004826 ORTHO05D006367 2.8e-06 55.5 87 46.0
AUR62028599 Chenopodium quinoa HOM05D004826 ORTHO05D006367 3.7e-06 55.1 96 37.5
Sc17g0001330 Simmondsia chinensis HOM05D004826 ORTHO05D006367 4.8e-06 54.7 94 39.4
VMungo1383G1287 Vigna mungo HOM05D004826 ORTHO05D006367 4.8e-06 54.7 96 40.6
FvH4_2g23260 Fragaria vesca HOM05D004826 ORTHO05D006367 6.3e-06 54.3 87 44.8
FAN15G0865 Fragaria x ananassa HOM05D004826 ORTHO05D006367 6.3e-06 54.3 87 44.8
FAN27G1728 Fragaria x ananassa HOM05D004826 ORTHO05D006367 8.2e-06 53.9 97 40.2
TPR.G24327 Trifolium pratense HOM05D004826 ORTHO05D006367 8.2e-06 53.9 99 44.4


User provided reference genes

Program Settings