Gene: Sopen06g003480

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g003480
  • Transcript Identifier Sopen06g003480.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 2879291-2884596 : positive

Gene Family Information

  • ID HOM05D004826
  • #Genes/#Species 153/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g003480.1

Descriptions

  • Description Transducin/WD40 repeat-like superfamily protein | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat-like-containing domain , WD40 repeat, conserved site , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: Coatomer, alpha subunit
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0036265
IEA
InterProRNA (guanine-N7)-methylation
GO:0008618
ISO
PLAZA Integrative Orthology7-methylguanosine metabolic process AT1G03110
GO:0006400
ISO
PLAZA Integrative OrthologytRNA modification AT1G03110

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR036322 WD40-repeat-containing domain superfamily
IPR028884 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit
IPR001680 WD40 repeat
Mapman id Description
16.5.7.3.2 RNA processing.RNA modification.tRNA methylation.TRM8-TRM82 tRNA guanosine-methyltransferase complex.component TRM82