Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040539.1 Olea europaea HOM05D005183 ORTHO05D006684 1.1e-173 613.2 316 100.0
Oeu013577.1 Olea europaea HOM05D005183 ORTHO05D006684 4.7e-156 554.7 316 89.9
Dinv19828 Davidia involucrata HOM05D005183 ORTHO05D006684 2.1e-148 529.3 314 84.4
MSTRG.5807 Avicennia marina HOM05D005183 ORTHO05D006684 2.0e-146 522.7 316 83.5
Hma1.2p1_0611F.1_g188660 Hydrangea macrophylla HOM05D005183 ORTHO05D006684 2.6e-146 522.3 314 82.5
PGSC0003DMG400028174 Solanum tuberosum HOM05D005183 ORTHO05D006684 2.8e-145 518.8 318 82.1
Nitab4.5_0002715g0140 Nicotiana tabacum HOM05D005183 ORTHO05D006684 3.7e-145 518.5 314 82.8
Peaxi162Scf00110g02022 Petunia axillaris HOM05D005183 ORTHO05D006684 1.1e-144 516.9 316 80.7
Solyc10g083600.2 Solanum lycopersicum HOM05D005183 ORTHO05D006684 1.8e-144 516.2 318 81.8
Actinidia10400 Actinidia chinensis HOM05D005183 ORTHO05D006684 2.4e-144 515.8 307 81.8
CSS0041546 Camellia sinensis var. sinensis HOM05D005183 ORTHO05D006684 2.4e-144 515.8 314 83.1
CAN.G1138.15 Capsicum annuum HOM05D005183 ORTHO05D006684 1.2e-143 513.5 312 82.1
Sopen10g033080 Solanum pennellii HOM05D005183 ORTHO05D006684 1.6e-143 513.1 318 81.4
GSVIVG01033782001 Vitis vinifera HOM05D005183 ORTHO05D006684 3.5e-143 511.9 316 80.4
SGA_v2.0_scaffold40G15402 Striga asiatica HOM05D005183 ORTHO05D006684 1.7e-142 509.6 312 80.4
DCAR_029401 Daucus carota HOM05D005183 ORTHO05D006684 2.9e-142 508.8 316 79.4
DCAR_010653 Daucus carota HOM05D005183 ORTHO05D006684 3.8e-142 508.4 316 79.4
SGA_v2.0_scaffold75G24795 Striga asiatica HOM05D005183 ORTHO05D006684 5.0e-142 508.1 312 80.8
Migut.J00983 Erythranthe guttata HOM05D005183 ORTHO05D006684 4.2e-141 505.0 311 79.4
Nn4g24833 Nelumbo nucifera HOM05D005183 ORTHO05D006684 7.2e-141 504.2 316 80.1
Cc09_g05380 Coffea canephora HOM05D005183 ORTHO05D006684 9.4e-141 503.8 316 78.8
ClCG10G019350 Citrullus lanatus HOM05D005183 ORTHO05D006684 6.1e-140 501.1 315 78.7
Gorai.002G242600 Gossypium raimondii HOM05D005183 ORTHO05D006684 2.3e-139 499.2 316 79.7
Nn2g14627 Nelumbo nucifera HOM05D005183 ORTHO05D006684 2.3e-139 499.2 316 77.8
Migut.N00918 Erythranthe guttata HOM05D005183 ORTHO05D006684 4.0e-139 498.4 312 79.2
PGR004G1465 Punica granatum HOM05D005183 ORTHO05D006684 4.0e-139 498.4 316 78.2
Gohir.D01G198400 Gossypium hirsutum HOM05D005183 ORTHO05D006684 2.0e-138 496.1 316 79.1
unitig_0.g1556 Utricularia gibba HOM05D005183 ORTHO05D006684 3.4e-138 495.4 316 78.5
Gohir.A01G209300 Gossypium hirsutum HOM05D005183 ORTHO05D006684 4.4e-138 495.0 316 78.8
Eucgr.A01543 Eucalyptus grandis HOM05D005183 ORTHO05D006684 1.7e-137 493.0 316 77.8
Thecc.05G081000 Theobroma cacao HOM05D005183 ORTHO05D006684 2.2e-137 492.7 316 78.5
Lsat_1_v5_gn_4_35140 Lactuca sativa HOM05D005183 ORTHO05D006684 4.8e-137 491.5 293 82.9
Ciclev10028864m.g Citrus clementina HOM05D005183 ORTHO05D006684 8.3e-137 490.7 314 77.4
vmacro17863 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 8.3e-137 490.7 341 74.8
Lj3A998T32 Lonicera japonica HOM05D005183 ORTHO05D006684 1.4e-136 490.0 313 79.9
Manes.08G020900 Manihot esculenta HOM05D005183 ORTHO05D006684 1.4e-136 490.0 316 76.9
Nitab4.5_0005311g0010 Nicotiana tabacum HOM05D005183 ORTHO05D006684 1.4e-136 490.0 294 82.7
MELO3C018272.2 Cucumis melo HOM05D005183 ORTHO05D006684 4.1e-136 488.4 315 76.5
HanXRQChr02g0051911 Helianthus annuus HOM05D005183 ORTHO05D006684 4.1e-136 488.4 311 80.1
Sed0001030 Sechium edule HOM05D005183 ORTHO05D006684 2.0e-135 486.1 299 78.6
CiPaw.09G008700 Carya illinoinensis HOM05D005183 ORTHO05D006684 2.7e-135 485.7 313 76.7
COL.COLO4_29815 Corchorus olitorius HOM05D005183 ORTHO05D006684 2.7e-135 485.7 316 77.5
Duzib128G1222 Durio zibethinus HOM05D005183 ORTHO05D006684 7.7e-135 484.2 316 76.6
TAR371G0749 Trochodendron aralioides HOM05D005183 ORTHO05D006684 1.0e-134 483.8 312 76.9
CsaV3_3G036840 Cucumis sativus L. HOM05D005183 ORTHO05D006684 1.3e-134 483.4 312 76.3
Hund27408 Selenicereus undatus HOM05D005183 ORTHO05D006684 5.0e-134 481.5 312 76.6
Aqoxy2G03309 Aquilegia oxysepala HOM05D005183 ORTHO05D006684 1.5e-133 479.9 316 75.9
HanXRQChr17g0545251 Helianthus annuus HOM05D005183 ORTHO05D006684 1.5e-133 479.9 305 79.3
Lalb_Chr06g0173361 Lupinus albus HOM05D005183 ORTHO05D006684 1.9e-133 479.6 311 76.2
Potri.015G088700 Populus trichocarpa HOM05D005183 ORTHO05D006684 3.2e-133 478.8 314 76.1
Cpa.g.sc111.25 Carica papaya HOM05D005183 ORTHO05D006684 5.5e-133 478.0 312 76.6
Ca_06436_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 1.6e-132 476.5 314 75.5
Sc20g0006050 Simmondsia chinensis HOM05D005183 ORTHO05D006684 8.0e-132 474.2 315 76.5
ECA233G2114 Erigeron canadensis HOM05D005183 ORTHO05D006684 1.0e-131 473.8 286 82.2
Psat6g078200 Pisum sativum HOM05D005183 ORTHO05D006684 2.3e-131 472.6 314 73.9
THA.LOC104808666 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 6.8e-131 471.1 316 73.4
Hund17099 Selenicereus undatus HOM05D005183 ORTHO05D006684 3.4e-130 468.8 311 75.6
Ah.09g233440 Amaranthus hybridus HOM05D005183 ORTHO05D006684 5.7e-130 468.0 314 73.9
TPR.G28986 Trifolium pratense HOM05D005183 ORTHO05D006684 9.8e-130 467.2 314 73.9
Glyma.10G066200 Glycine max HOM05D005183 ORTHO05D006684 1.7e-129 466.5 314 74.5
QL07p040540 Quercus lobata HOM05D005183 ORTHO05D006684 2.8e-129 465.7 314 74.5
Glyma.13G151300 Glycine max HOM05D005183 ORTHO05D006684 1.1e-128 463.8 314 73.9
VMungo0720G1906 Vigna mungo HOM05D005183 ORTHO05D006684 3.1e-128 462.2 313 74.1
Phvul.007G223300 Phaseolus vulgaris HOM05D005183 ORTHO05D006684 5.4e-128 461.5 312 73.4
Lj5g0003294 Lotus japonicus HOM05D005183 ORTHO05D006684 7.0e-128 461.1 314 73.2
Cfa008157 Carpinus fangiana HOM05D005183 ORTHO05D006684 5.9e-127 458.0 314 73.6
Cfa016373 Carpinus fangiana HOM05D005183 ORTHO05D006684 1.0e-126 457.2 314 72.3
Haze_00122 Corylus avellana HOM05D005183 ORTHO05D006684 1.3e-126 456.8 341 69.5
EL10Ac1g00750 Beta vulgaris HOM05D005183 ORTHO05D006684 8.6e-126 454.1 311 73.3
TWI74G1514 Tripterygium wilfordii HOM05D005183 ORTHO05D006684 8.6e-126 454.1 315 72.4
vmacro00782 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 8.6e-126 454.1 314 75.5
Aa31LG8G10050 Aethionema arabicum HOM05D005183 ORTHO05D006684 1.5e-125 453.4 311 71.7
AUR62013753 Chenopodium quinoa HOM05D005183 ORTHO05D006684 1.5e-125 453.4 312 73.1
AUR62023398 Chenopodium quinoa HOM05D005183 ORTHO05D006684 1.9e-125 453.0 312 72.8
Medtr1g061160 Medicago truncatula HOM05D005183 ORTHO05D006684 1.9e-125 453.0 312 72.8
CDE08G0191 Ceratophyllum demersum HOM05D005183 ORTHO05D006684 1.6e-124 449.9 311 73.0
Sabra15G0111600 Salix brachista HOM05D005183 ORTHO05D006684 2.8e-124 449.1 314 71.3
Zm00001eb255650 Zea mays HOM05D005183 ORTHO05D006684 4.7e-124 448.4 313 72.5
TPR.G5686 Trifolium pratense HOM05D005183 ORTHO05D006684 6.1e-124 448.0 293 74.4
Prupe.7G117100 Prunus persica HOM05D005183 ORTHO05D006684 1.8e-123 446.4 320 70.6
PSO478G0399 Papaver somniferum HOM05D005183 ORTHO05D006684 3.0e-123 445.7 317 71.0
Zm00001eb292270 Zea mays HOM05D005183 ORTHO05D006684 3.0e-123 445.7 313 72.2
PSO017G1745 Papaver somniferum HOM05D005183 ORTHO05D006684 1.2e-122 443.7 317 71.0
ATR0559G171 Amborella trichopoda HOM05D005183 ORTHO05D006684 1.5e-122 443.4 313 72.2
FvH4_6g17900 Fragaria vesca HOM05D005183 ORTHO05D006684 2.6e-122 442.6 329 67.8
FAN02G4090 Fragaria x ananassa HOM05D005183 ORTHO05D006684 2.6e-122 442.6 329 67.8
FAN14G3711 Fragaria x ananassa HOM05D005183 ORTHO05D006684 2.6e-122 442.6 329 67.8
Os01g0513800 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 2.6e-122 442.6 313 71.9
Carub.0003s2385 Capsella rubella HOM05D005183 ORTHO05D006684 5.7e-122 441.4 299 71.2
BcaC06g35547 Brassica carinata HOM05D005183 ORTHO05D006684 2.2e-121 439.5 316 68.4
BolC7t41857H Brassica oleracea HOM05D005183 ORTHO05D006684 2.2e-121 439.5 316 68.4
FAN05G1411 Fragaria x ananassa HOM05D005183 ORTHO05D006684 3.7e-121 438.7 329 66.9
MD12G1018000 Malus domestica HOM05D005183 ORTHO05D006684 6.3e-121 438.0 317 69.1
Thhalv10021169m.g Eutrema salsugineum HOM05D005183 ORTHO05D006684 2.4e-120 436.0 312 68.3
A07p08780 Brassica napus HOM05D005183 ORTHO05D006684 3.2e-120 435.6 316 68.0
C07p13620 Brassica napus HOM05D005183 ORTHO05D006684 3.2e-120 435.6 316 68.0
BraA07t28669Z Brassica rapa HOM05D005183 ORTHO05D006684 7.0e-120 434.5 316 67.7
RcHm_v2.0_Chr3g0472151 Rosa chinensis HOM05D005183 ORTHO05D006684 7.0e-120 434.5 329 66.9
FAN09G1214 Fragaria x ananassa HOM05D005183 ORTHO05D006684 9.2e-120 434.1 339 65.8
Sp3g21310 Schrenkiella parvula HOM05D005183 ORTHO05D006684 1.6e-119 433.3 316 68.0
BcaB06g26517 Brassica carinata HOM05D005183 ORTHO05D006684 5.9e-119 431.4 316 67.4
AT3G23620 Arabidopsis thaliana HOM05D005183 ORTHO05D006684 1.0e-118 430.6 316 68.7
CARHR099550 Cardamine hirsuta HOM05D005183 ORTHO05D006684 1.0e-118 430.6 318 68.6
BcaB04g20435 Brassica carinata HOM05D005183 ORTHO05D006684 1.3e-118 430.3 316 68.0
BolC1t03963H Brassica oleracea HOM05D005183 ORTHO05D006684 1.7e-118 429.9 299 69.9
AL3G38300 Arabidopsis lyrata HOM05D005183 ORTHO05D006684 2.9e-118 429.1 316 68.4
A01p31440 Brassica napus HOM05D005183 ORTHO05D006684 2.9e-118 429.1 299 69.9
BraA01t03270Z Brassica rapa HOM05D005183 ORTHO05D006684 2.9e-118 429.1 299 69.9
C01p40070 Brassica napus HOM05D005183 ORTHO05D006684 3.9e-118 428.7 299 69.6
HPP92_026689 Vanilla planifolia HOM05D005183 ORTHO05D006684 1.1e-117 427.2 312 68.3
MD14G1016000 Malus domestica HOM05D005183 ORTHO05D006684 8.0e-116 421.0 300 70.7
HPP92_017999 Vanilla planifolia HOM05D005183 ORTHO05D006684 2.3e-115 419.5 291 70.1
Atru.chr8.1634 Acer truncatum HOM05D005183 ORTHO05D006684 9.8e-114 414.1 269 73.2
SEGI_13997 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 1.7e-113 413.3 314 67.2
THA.LOC104804771 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 4.9e-113 411.8 257 77.0
SEGI_31815 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 8.3e-113 411.0 314 67.2
Gohir.A01G215950 Gossypium hirsutum HOM05D005183 ORTHO05D006684 3.0e-110 402.5 329 66.0
FAN05G2784 Fragaria x ananassa HOM05D005183 ORTHO05D006684 9.5e-109 397.5 253 73.9
Actinidia31290 Actinidia chinensis HOM05D005183 ORTHO05D006684 2.6e-106 389.4 307 66.8
Rhsim11G0063800 Rhododendron simsii HOM05D005183 ORTHO05D006684 2.4e-104 382.9 314 65.3
Nitab4.5_0000132g0170 Nicotiana tabacum HOM05D005183 ORTHO05D006684 7.3e-101 371.3 225 82.7
Pp3c4_19370 Physcomitrium patens HOM05D005183 ORTHO05D006684 6.4e-97 358.2 311 58.5
Lalb_Chr02g0155161 Lupinus albus HOM05D005183 ORTHO05D006684 1.8e-91 340.1 231 71.9
SMO367G0957 Selaginella moellendorffii HOM05D005183 ORTHO05D006684 3.4e-90 335.9 324 54.9
Mapoly0098s0050 Marchantia polymorpha HOM05D005183 ORTHO05D006684 1.7e-89 333.6 299 57.5
Ca_28565_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 4.2e-88 328.9 223 73.1
Haze_19538 Corylus avellana HOM05D005183 ORTHO05D006684 6.9e-83 311.6 283 58.7
Pp3c26_6490 Physcomitrium patens HOM05D005183 ORTHO05D006684 1.2e-82 310.8 315 52.1
AagrBONN_evm.TU.Sc2ySwM_344.5577 Anthoceros agrestis HOM05D005183 ORTHO05D006684 2.6e-82 309.7 307 52.8
Oeu037537.3 Olea europaea HOM05D005183 ORTHO05D006684 1.2e-79 300.8 312 58.7
CBR_g32692 Chara braunii HOM05D012618 ORTHO05D006684 2.4e-75 286.6 294 53.7
Cre03.g197000 Chlamydomonas reinhardtii HOM05D005183 ORTHO05D006684 1.1e-72 277.7 306 48.0
MCO10G188 Micromonas commoda HOM05D005183 ORTHO05D006684 3.2e-64 249.6 285 47.4
HanXRQChr08g0223931 Helianthus annuus HOM05D005183 ORTHO05D006684 8.2e-52 208.4 185 62.2
PRCOL_00004600 Prasinoderma coloniale HOM05D005183 ORTHO05D006684 3.2e-48 196.4 293 39.6
Ca_11626_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 1.5e-37 161.0 104 74.0
MSTRG.19230 Avicennia marina HOM05D005183 ORTHO05D026969 1.9e-32 144.1 90 81.1
Lalb_Chr02g0155171 Lupinus albus HOM05D005183 ORTHO05D006684 1.6e-31 141.0 93 76.3
Os05g0506900 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 1.0e-30 138.3 94 72.3
MELO3C028534.2 Cucumis melo HOM05D005183 ORTHO05D006684 4.5e-26 122.9 79 77.2
TAR371G0095 Trochodendron aralioides HOM05D005183 ORTHO05D045124 5.4e-19 99.4 116 52.6
C04p39730 Brassica napus HOM05D005183 ORTHO05D026969 1.6e-18 97.8 90 60.0
BolC4t25545H Brassica oleracea HOM05D005183 ORTHO05D026969 1.6e-18 97.8 90 60.0
BolC6t35803H Brassica oleracea HOM05D005183 ORTHO05D026969 5.2e-14 82.8 90 53.3
Dinv21257 Davidia involucrata HOM05D005183 ORTHO05D045124 4.4e-13 79.7 99 55.6


User provided reference genes

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