Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040336.3 Olea europaea HOM05D004784 ORTHO05D005762 1.5e-300 1035.4 519 100.0
Oeu002744.1 Olea europaea HOM05D004784 ORTHO05D005762 9.2e-210 733.8 520 72.1
RhsimUnG0232700 Rhododendron simsii HOM05D004784 ORTHO05D005762 9.2e-210 733.8 520 72.9
Hma1.2p1_0091F.1_g046500 Hydrangea macrophylla HOM05D004784 ORTHO05D005762 1.0e-208 730.3 520 72.3
Oeu013835.1 Olea europaea HOM05D004784 ORTHO05D005762 1.7e-208 729.6 520 71.9
SGA_v2.0_scaffold7G03812 Striga asiatica HOM05D004784 ORTHO05D005762 3.0e-208 728.8 521 72.0
Dinv13913 Davidia involucrata HOM05D004784 ORTHO05D005762 1.9e-207 726.1 520 72.1
SalBow8G0639 Salvia bowleyana HOM05D004784 ORTHO05D005762 2.5e-207 725.7 520 71.5
Nitab4.5_0002695g0040 Nicotiana tabacum HOM05D004784 ORTHO05D005762 4.3e-207 724.9 515 72.0
MSTRG.7197 Avicennia marina HOM05D004784 ORTHO05D005762 9.5e-207 723.8 520 71.3
CiPaw.09G093700 Carya illinoinensis HOM05D004784 ORTHO05D005762 1.6e-206 723.0 520 71.2
Dinv20065 Davidia involucrata HOM05D004784 ORTHO05D005762 1.6e-206 723.0 520 71.5
TWI38G1114 Tripterygium wilfordii HOM05D004784 ORTHO05D005762 6.2e-206 721.1 520 71.3
Lj1A1232G87 Lonicera japonica HOM05D004784 ORTHO05D005762 8.1e-206 720.7 518 71.4
Nitab4.5_0007963g0010 Nicotiana tabacum HOM05D004784 ORTHO05D005762 8.1e-206 720.7 515 71.7
TWI63G0560 Tripterygium wilfordii HOM05D004784 ORTHO05D005762 8.1e-206 720.7 520 71.2
CiPaw.10G073000 Carya illinoinensis HOM05D004784 ORTHO05D005762 5.2e-205 718.0 520 71.2
Peaxi162Scf00131g01117 Petunia axillaris HOM05D004784 ORTHO05D005762 6.8e-205 717.6 516 70.9
Solyc02g080810.3 Solanum lycopersicum HOM05D004784 ORTHO05D005762 6.8e-205 717.6 515 70.9
Hma1.2p1_0298F.1_g117720 Hydrangea macrophylla HOM05D004784 ORTHO05D005762 8.9e-205 717.2 519 71.3
Prupe.4G018500 Prunus persica HOM05D004784 ORTHO05D005762 1.2e-204 716.8 520 71.2
TAR629G2745 Trochodendron aralioides HOM05D004784 ORTHO05D005762 2.0e-204 716.1 520 70.2
Cc09_g01490 Coffea canephora HOM05D004784 ORTHO05D005762 2.6e-204 715.7 517 71.0
PGSC0003DMG400016444 Solanum tuberosum HOM05D004784 ORTHO05D005762 3.4e-204 715.3 515 70.5
QL02p099920 Quercus lobata HOM05D004784 ORTHO05D005762 5.8e-204 714.5 519 70.3
QL05p072692 Quercus lobata HOM05D004784 ORTHO05D005762 7.5e-204 714.1 516 70.7
Migut.M01336 Erythranthe guttata HOM05D004784 ORTHO05D005762 9.8e-204 713.8 518 70.3
Sopen02g025500 Solanum pennellii HOM05D004784 ORTHO05D005762 9.8e-204 713.8 515 70.3
Rhsim13G0152700 Rhododendron simsii HOM05D004784 ORTHO05D005762 2.9e-203 712.2 520 71.3
Sed0006727 Sechium edule HOM05D004784 ORTHO05D005762 2.9e-203 712.2 517 70.6
VMungo1215G1817 Vigna mungo HOM05D004784 ORTHO05D005762 3.7e-203 711.8 517 71.0
Manes.17G025900 Manihot esculenta HOM05D004784 ORTHO05D005762 1.4e-202 709.9 517 70.4
Duzib192G0808 Durio zibethinus HOM05D004784 ORTHO05D005762 2.4e-202 709.1 517 70.0
Glyma.17G012000 Glycine max HOM05D004784 ORTHO05D005762 7.1e-202 707.6 517 70.2
Haze_06821 Corylus avellana HOM05D004784 ORTHO05D005762 9.2e-202 707.2 520 69.8
CAN.G1014.12 Capsicum annuum HOM05D004784 ORTHO05D005762 1.2e-201 706.8 515 70.5
MSTRG.14637 Avicennia marina HOM05D004784 ORTHO05D005762 1.6e-201 706.4 520 69.0
Cfa000202 Carpinus fangiana HOM05D004784 ORTHO05D005762 1.6e-201 706.4 520 69.8
Phvul.003G080400 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 2.1e-201 706.1 517 69.8
Thecc.06G223500 Theobroma cacao HOM05D004784 ORTHO05D005762 2.1e-201 706.1 517 70.0
FvH4_3g01820 Fragaria vesca HOM05D004784 ORTHO05D005762 2.7e-201 705.7 520 70.0
FAN25G0478 Fragaria x ananassa HOM05D004784 ORTHO05D005762 4.6e-201 704.9 520 70.0
Glyma.09G004700 Glycine max HOM05D004784 ORTHO05D005762 6.0e-201 704.5 517 70.0
Glyma.07G262100 Glycine max HOM05D004784 ORTHO05D005762 7.8e-201 704.1 517 69.4
MD10G1323700 Malus domestica HOM05D004784 ORTHO05D005762 7.8e-201 704.1 520 70.0
unitig_92.g28113 Utricularia gibba HOM05D004784 ORTHO05D005762 7.8e-201 704.1 517 69.8
RcHm_v2.0_Chr5g0002651 Rosa chinensis HOM05D004784 ORTHO05D005762 1.0e-200 703.7 520 69.8
vmacro03682 Vaccinium macrocarpon HOM05D004784 ORTHO05D005762 1.0e-200 703.7 536 69.4
Lalb_Chr18g0056491 Lupinus albus HOM05D004784 ORTHO05D005762 1.7e-200 703.0 515 70.3
MELO3C002444.2 Cucumis melo HOM05D004784 ORTHO05D005762 2.3e-200 702.6 517 70.2
FAN21G1227 Fragaria x ananassa HOM05D004784 ORTHO05D005762 2.3e-200 702.6 520 69.8
Gohir.A05G171500 Gossypium hirsutum HOM05D004784 ORTHO05D005762 2.3e-200 702.6 517 69.6
ClCG03G004610 Citrullus lanatus HOM05D004784 ORTHO05D005762 3.0e-200 702.2 517 70.0
Gohir.D05G174600 Gossypium hirsutum HOM05D004784 ORTHO05D005762 3.0e-200 702.2 517 69.8
CsaV3_1G010620 Cucumis sativus L. HOM05D004784 ORTHO05D005762 5.1e-200 701.4 517 70.0
Eucgr.L02773 Eucalyptus grandis HOM05D004784 ORTHO05D005762 5.1e-200 701.4 520 69.2
arahy.Tifrunner.gnm1.ann1.EH8QHL Arachis hypogaea HOM05D004784 ORTHO05D005762 6.6e-200 701.0 517 69.4
TPR.G37066 Trifolium pratense HOM05D004784 ORTHO05D005762 6.6e-200 701.0 517 69.1
Hund23455 Selenicereus undatus HOM05D004784 ORTHO05D005762 1.9e-199 699.5 520 68.5
Ciclev10015433m.g Citrus clementina HOM05D004784 ORTHO05D005762 2.5e-199 699.1 521 69.1
COL.COLO4_31797 Corchorus olitorius HOM05D004784 ORTHO05D005762 4.3e-199 698.4 517 68.9
Medtr4g132360 Medicago truncatula HOM05D004784 ORTHO05D005762 4.3e-199 698.4 517 69.2
Nn1g03473 Nelumbo nucifera HOM05D004784 ORTHO05D005762 5.6e-199 698.0 559 65.8
Hund21422 Selenicereus undatus HOM05D004784 ORTHO05D005762 7.3e-199 697.6 520 68.1
Ca_21072_v3 Cicer arietinum L. HOM05D004784 ORTHO05D005762 9.5e-199 697.2 517 69.1
MBI02_g15378_MAGBIO Magnolia biondii HOM05D004784 ORTHO05D005762 1.6e-198 696.4 521 68.7
Potri.004G009600 Populus trichocarpa HOM05D004784 ORTHO05D005762 1.6e-198 696.4 520 68.3
Potri.011G006800 Populus trichocarpa HOM05D004784 ORTHO05D005762 2.1e-198 696.0 520 68.3
Sed0013135 Sechium edule HOM05D004784 ORTHO05D005762 2.1e-198 696.0 517 69.1
Gohir.A06G149200 Gossypium hirsutum HOM05D004784 ORTHO05D005762 2.8e-198 695.7 517 68.9
Sabra11G0005900 Salix brachista HOM05D004784 ORTHO05D005762 2.8e-198 695.7 520 68.5
Lj6g0010262 Lotus japonicus HOM05D004784 ORTHO05D005762 3.6e-198 695.3 517 69.2
Psat4g005920 Pisum sativum HOM05D004784 ORTHO05D005762 4.7e-198 694.9 518 68.7
C08p47920 Brassica napus HOM05D004784 ORTHO05D005762 8.1e-198 694.1 520 68.8
Glyma.15G109300 Glycine max HOM05D004784 ORTHO05D005762 8.1e-198 694.1 516 69.2
Gorai.010G181500 Gossypium raimondii HOM05D004784 ORTHO05D005762 1.4e-197 693.3 517 68.7
A09p64310 Brassica napus HOM05D004784 ORTHO05D005762 1.8e-197 693.0 520 68.5
BraA09t41774Z Brassica rapa HOM05D004784 ORTHO05D005762 1.8e-197 693.0 520 68.5
AT1G11860 Arabidopsis thaliana HOM05D004784 ORTHO05D005762 2.3e-197 692.6 520 68.5
THA.LOC104809494 Tarenaya hassleriana HOM05D004784 ORTHO05D005762 4.0e-197 691.8 520 68.3
Gohir.D06G155300 Gossypium hirsutum HOM05D004784 ORTHO05D005762 5.2e-197 691.4 517 68.5
PSO541G3045 Papaver somniferum HOM05D004784 ORTHO05D005762 5.2e-197 691.4 521 67.4
CANSAT56G2555 Cannabis sativa HOM05D004784 ORTHO05D005762 6.8e-197 691.0 517 68.9
Thhalv10007781m.g Eutrema salsugineum HOM05D004784 ORTHO05D005762 6.8e-197 691.0 520 68.7
PSO675G1799 Papaver somniferum HOM05D004784 ORTHO05D005762 6.8e-197 691.0 521 67.4
AL1G23030 Arabidopsis lyrata HOM05D004784 ORTHO05D005762 8.9e-197 690.6 520 68.3
Aqoxy1G03119 Aquilegia oxysepala HOM05D004784 ORTHO05D005762 1.2e-196 690.3 520 67.3
Aa31LG1G2870 Aethionema arabicum HOM05D004784 ORTHO05D005762 1.5e-196 689.9 520 68.3
Phvul.006G148700 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 2.0e-196 689.5 517 68.5
PGR142G1596 Punica granatum HOM05D004784 ORTHO05D005762 2.0e-196 689.5 522 68.6
BolC8t52329H Brassica oleracea HOM05D004784 ORTHO05D005762 2.6e-196 689.1 520 68.3
Sp1g10470 Schrenkiella parvula HOM05D004784 ORTHO05D005762 2.6e-196 689.1 520 68.3
DCAR_008168 Daucus carota HOM05D004784 ORTHO05D005762 3.4e-196 688.7 532 67.9
Lalb_Chr15g0087671 Lupinus albus HOM05D004784 ORTHO05D005762 3.4e-196 688.7 515 68.7
Ah.14g087950 Amaranthus hybridus HOM05D004784 ORTHO05D005762 4.4e-196 688.3 520 67.9
Atru.chr10.2254 Acer truncatum HOM05D004784 ORTHO05D005762 5.8e-196 688.0 520 67.7
Ah.09g234740 Amaranthus hybridus HOM05D004784 ORTHO05D005762 9.9e-196 687.2 520 67.5
Carub.0001s1151 Capsella rubella HOM05D004784 ORTHO05D005762 1.7e-195 686.4 520 68.1
CARHR012170 Cardamine hirsuta HOM05D004784 ORTHO05D005762 3.7e-195 685.3 520 67.9
C08p14960 Brassica napus HOM05D004784 ORTHO05D005762 2.4e-194 682.6 521 68.1
BolC8t49127H Brassica oleracea HOM05D004784 ORTHO05D005762 2.4e-194 682.6 521 68.1
BraA08t35239Z Brassica rapa HOM05D004784 ORTHO05D005762 2.4e-194 682.6 521 68.3
CDE05G1701 Ceratophyllum demersum HOM05D004784 ORTHO05D005762 3.2e-194 682.2 517 66.9
CDE02G4424 Ceratophyllum demersum HOM05D004784 ORTHO05D005762 9.2e-194 680.6 517 67.3
arahy.Tifrunner.gnm1.ann1.PLZ2LX Arachis hypogaea HOM05D004784 ORTHO05D005762 1.0e-192 677.2 507 68.6
AUR62012328 Chenopodium quinoa HOM05D004784 ORTHO05D005762 2.3e-192 676.0 517 66.9
AUR62022970 Chenopodium quinoa HOM05D004784 ORTHO05D005762 3.0e-192 675.6 517 67.1
Sc24g0000220 Simmondsia chinensis HOM05D004784 ORTHO05D005762 1.2e-190 670.2 516 66.1
Sc05g0009310 Simmondsia chinensis HOM05D004784 ORTHO05D005762 6.2e-190 667.9 516 66.1
Nn030s41595 Nelumbo nucifera HOM05D004784 ORTHO05D005762 2.4e-189 666.0 487 70.4
vmacro22539 Vaccinium macrocarpon HOM05D004784 ORTHO05D005762 1.2e-188 663.7 527 68.5
EL10Ac6g15683 Beta vulgaris HOM05D004784 ORTHO05D005762 8.4e-187 657.5 563 61.1
Lsat_1_v5_gn_7_16480 Lactuca sativa HOM05D004784 ORTHO05D005762 2.4e-186 656.0 512 67.4
Gorai.009G179900 Gossypium raimondii HOM05D004784 ORTHO05D005762 9.3e-186 654.1 492 68.9
Sabra04G0005000 Salix brachista HOM05D004784 ORTHO05D005762 2.5e-183 646.0 496 66.9
A08p33210 Brassica napus HOM05D004784 ORTHO05D005762 3.3e-183 645.6 521 65.5
ATR0794G107 Amborella trichopoda HOM05D004784 ORTHO05D005762 5.6e-183 644.8 526 64.3
HPP92_004130 Vanilla planifolia HOM05D004784 ORTHO05D005762 1.8e-181 639.8 524 63.4
GSVIVG01012702001 Vitis vinifera HOM05D004784 ORTHO05D005762 4.4e-180 635.2 469 69.5
HanXRQChr15g0470421 Helianthus annuus HOM05D004784 ORTHO05D005762 1.4e-178 630.2 467 69.4
SEGI_27497 Sequoiadendron giganteum HOM05D004784 ORTHO05D005762 1.4e-178 630.2 520 61.7
Os04g0623800 Oryza sativa ssp. japonica HOM05D004784 ORTHO05D005762 2.4e-178 629.4 490 65.5
Zm00001eb070250 Zea mays HOM05D004784 ORTHO05D005762 2.5e-175 619.4 490 64.7
BcaB03g13227 Brassica carinata HOM05D004784 ORTHO05D005762 1.8e-173 613.2 469 67.4
ECA236G1893 Erigeron canadensis HOM05D004784 ORTHO05D005762 5.5e-170 601.7 517 62.5
Pp3c4_15010 Physcomitrium patens HOM05D004784 ORTHO05D005762 4.2e-162 575.5 516 57.6
Pp3c12_9500 Physcomitrium patens HOM05D004784 ORTHO05D005762 5.5e-162 575.1 515 57.7
AagrBONN_evm.TU.Sc2ySwM_344.1952 Anthoceros agrestis HOM05D004784 ORTHO05D005762 9.6e-159 564.3 517 57.6
Mapoly0129s0024 Marchantia polymorpha HOM05D004784 ORTHO05D005762 6.9e-157 558.1 491 56.8
TAR627G1106 Trochodendron aralioides HOM05D004784 ORTHO05D005762 5.9e-156 555.1 431 66.8
SMO352G0047 Selaginella moellendorffii HOM05D004784 ORTHO05D005762 4.1e-149 532.3 508 54.5
CSS0014504 Camellia sinensis var. sinensis HOM05D004784 ORTHO05D005762 6.5e-147 525.0 498 58.0
A06p08340 Brassica napus HOM05D004784 ORTHO05D005762 1.4e-144 517.3 520 55.6
TAR626G0807 Trochodendron aralioides HOM05D004784 ORTHO05D005762 3.7e-134 482.6 453 57.2
Actinidia26902 Actinidia chinensis HOM05D004784 ORTHO05D005762 8.5e-131 471.5 421 61.3
Cre03.g193750 Chlamydomonas reinhardtii HOM05D004784 ORTHO05D005762 2.0e-127 460.3 492 49.8
Eucgr.E03909 Eucalyptus grandis HOM05D004784 ORTHO05D005762 5.9e-116 422.2 356 63.5
Atru.chr8.533 Acer truncatum HOM05D004784 ORTHO05D005762 9.8e-111 404.8 369 58.5
PRCOL_00007041 Prasinoderma coloniale HOM05D004784 ORTHO05D005762 1.3e-110 404.4 479 47.0
MCO15G045 Micromonas commoda HOM05D004784 ORTHO05D005762 5.2e-104 382.5 496 43.3
MD05G1348800 Malus domestica HOM05D004784 ORTHO05D005762 1.8e-101 374.0 349 58.2
Cpa.g.sc152.29 Carica papaya HOM05D004784 ORTHO05D005762 2.4e-101 373.6 197 89.3
Lalb_Chr20g0118761 Lupinus albus HOM05D004784 ORTHO05D005762 7.3e-98 362.1 336 58.3
BraA06t24032Z Brassica rapa HOM05D000911 ORTHO05D001266 4.1e-93 346.3 350 55.1
CBR_g24348 Chara braunii HOM05D004784 ORTHO05D005762 1.1e-72 278.5 183 75.4
Sopen07g011340 Solanum pennellii HOM05D004784 ORTHO05D005762 5.2e-72 276.2 180 73.9
Cfa026602 Carpinus fangiana HOM05D004784 ORTHO05D005762 2.8e-65 253.8 513 35.1
Haze_26660 Corylus avellana HOM05D004784 ORTHO05D005762 1.2e-63 248.4 497 35.2
EL10Ac1g01135 Beta vulgaris HOM05D004784 ORTHO05D005762 3.0e-59 233.8 141 76.6
EL10Ac2g03767 Beta vulgaris HOM05D004784 ORTHO05D005762 5.1e-59 233.0 140 77.1
Atru.chr8.531 Acer truncatum HOM05D004784 ORTHO05D005762 1.3e-54 218.4 124 81.5
Actinidia05506 Actinidia chinensis HOM05D004784 ORTHO05D005762 1.0e-51 208.8 130 80.8
Actinidia11861 Actinidia chinensis HOM05D004784 ORTHO05D005762 7.9e-20 102.8 58 75.9
Actinidia15969 Actinidia chinensis HOM05D004784 ORTHO05D058202 2.0e-10 71.6 42 73.8


User provided reference genes

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