Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040038.1 Olea europaea HOM05D006973 ORTHO05D008636 3.5e-71 271.6 140 100.0
Oeu020059.1 Olea europaea HOM05D006973 ORTHO05D008636 2.3e-46 189.1 142 75.4
Potri.002G060100 Populus trichocarpa HOM05D006973 ORTHO05D008636 1.9e-21 106.3 114 51.8
Manes.02G084300 Manihot esculenta HOM05D006973 ORTHO05D008636 3.3e-21 105.5 106 57.5
Dinv21566 Davidia involucrata HOM05D006973 ORTHO05D008636 8.1e-20 100.9 117 55.6
Peaxi162Scf00111g00009 Petunia axillaris HOM05D006973 ORTHO05D008636 8.1e-20 100.9 140 47.9
Nitab4.5_0001675g0100 Nicotiana tabacum HOM05D006973 ORTHO05D008636 1.8e-19 99.8 141 49.6
MSTRG.14293 Avicennia marina HOM05D006973 ORTHO05D008636 2.4e-19 99.4 144 46.5
Cfa021245 Carpinus fangiana HOM05D006973 ORTHO05D008636 3.1e-19 99.0 95 61.1
Duzib187G1733 Durio zibethinus HOM05D006973 ORTHO05D008636 4.0e-19 98.6 120 49.2
Nitab4.5_0003934g0010 Nicotiana tabacum HOM05D006973 ORTHO05D008636 1.5e-18 96.7 64 78.1
Potri.005G201500 Populus trichocarpa HOM05D006973 ORTHO05D008636 4.5e-18 95.1 116 48.3
CAN.G585.39 Capsicum annuum HOM05D006973 ORTHO05D008636 5.8e-18 94.7 64 76.6
Thecc.01G161800 Theobroma cacao HOM05D006973 ORTHO05D008636 5.8e-18 94.7 64 75.0
Prupe.3G172700 Prunus persica HOM05D006973 ORTHO05D008636 7.6e-18 94.4 131 47.3
Sabra02G0048600 Salix brachista HOM05D006973 ORTHO05D008636 1.0e-17 94.0 133 42.1
Haze_13497 Corylus avellana HOM05D006973 ORTHO05D008636 2.2e-17 92.8 64 73.4
Duzib147G0021 Durio zibethinus HOM05D006973 ORTHO05D008636 4.2e-16 88.6 64 68.8
FAN02G1229 Fragaria x ananassa HOM05D006973 ORTHO05D008636 5.5e-16 88.2 144 41.7
FvH4_6g38230 Fragaria vesca HOM05D006973 ORTHO05D008636 7.1e-16 87.8 144 41.7
FAN14G5571 Fragaria x ananassa HOM05D006973 ORTHO05D008636 7.1e-16 87.8 144 41.7
Gohir.A11G060500 Gossypium hirsutum HOM05D006973 ORTHO05D008636 9.3e-16 87.4 65 67.7
Rhsim06G0116300 Rhododendron simsii HOM05D006973 ORTHO05D008636 9.3e-16 87.4 129 43.4
Gohir.D11G064600 Gossypium hirsutum HOM05D006973 ORTHO05D008636 1.2e-15 87.0 65 67.7
Gorai.007G069800 Gossypium raimondii HOM05D006973 ORTHO05D008636 1.2e-15 87.0 65 67.7
PGSC0003DMG400017344 Solanum tuberosum HOM05D006973 ORTHO05D008636 1.2e-15 87.0 61 70.5
Solyc07g056360.1 Solanum lycopersicum HOM05D006973 ORTHO05D008636 1.6e-15 86.7 61 68.9
FAN05G1052 Fragaria x ananassa HOM05D006973 ORTHO05D008636 2.1e-15 86.3 148 40.5
Sopen07g029740 Solanum pennellii HOM05D006973 ORTHO05D008636 3.5e-15 85.5 61 67.2
MBI07_g21782_MAGBIO Magnolia biondii HOM05D006973 ORTHO05D008636 7.9e-15 84.3 88 54.5
MBI07_g41313_MAGBIO Magnolia biondii HOM05D006973 ORTHO05D008636 7.9e-15 84.3 88 54.5
Nn3g20922 Nelumbo nucifera HOM05D006973 ORTHO05D008636 1.0e-14 84.0 70 58.6
Nn6g34359 Nelumbo nucifera HOM05D006973 ORTHO05D008636 1.3e-14 83.6 147 38.1
RcHm_v2.0_Chr2g0151491 Rosa chinensis HOM05D006973 ORTHO05D008636 1.8e-14 83.2 147 41.5
Actinidia32515 Actinidia chinensis HOM05D006973 ORTHO05D008636 3.0e-14 82.4 102 48.0
FAN09G4519 Fragaria x ananassa HOM05D006973 ORTHO05D008636 3.9e-14 82.0 140 39.3
TAR629G2498 Trochodendron aralioides HOM05D006973 ORTHO05D008636 3.9e-14 82.0 70 58.6
MELO3C014471.2 Cucumis melo HOM05D006973 ORTHO05D008636 5.1e-14 81.6 69 60.9
PGR042G1786 Punica granatum HOM05D006973 ORTHO05D008636 6.7e-14 81.3 58 69.0
QL08p044096 Quercus lobata HOM05D006973 ORTHO05D008636 6.7e-14 81.3 113 46.0
CsaV3_6G038070 Cucumis sativus L. HOM05D006973 ORTHO05D008636 8.7e-14 80.9 69 60.9
ClCG09G022400 Citrullus lanatus HOM05D006973 ORTHO05D008636 1.1e-13 80.5 120 40.8
A03p23820 Brassica napus HOM05D006973 ORTHO05D008636 1.5e-13 80.1 70 54.3
BraA03t11597Z Brassica rapa HOM05D006973 ORTHO05D008636 1.5e-13 80.1 70 54.3
CANSAT64G0305 Cannabis sativa HOM05D006973 ORTHO05D008636 1.5e-13 80.1 61 65.6
A04p32440 Brassica napus HOM05D006973 ORTHO05D008636 1.9e-13 79.7 70 52.9
BraA04t18696Z Brassica rapa HOM05D006973 ORTHO05D008636 1.9e-13 79.7 70 52.9
Cc05_g09430 Coffea canephora HOM05D006973 ORTHO05D008636 2.5e-13 79.3 54 74.1
Atru.chr6.2093 Acer truncatum HOM05D006973 ORTHO05D008636 3.3e-13 79.0 61 65.6
BcaB06g29268 Brassica carinata HOM05D006973 ORTHO05D008636 3.3e-13 79.0 70 52.9
BcaB06g29270 Brassica carinata HOM05D006973 ORTHO05D008636 3.3e-13 79.0 70 52.9
BcaC02g07217 Brassica carinata HOM05D006973 ORTHO05D008636 3.3e-13 79.0 70 52.9
C04p69950 Brassica napus HOM05D006973 ORTHO05D008636 3.3e-13 79.0 70 52.9
BolC4t28495H Brassica oleracea HOM05D006973 ORTHO05D008636 3.3e-13 79.0 70 52.9
Ciclev10033026m.g Citrus clementina HOM05D006973 ORTHO05D008636 4.3e-13 78.6 61 60.7
Thhalv10006323m.g Eutrema salsugineum HOM05D006973 ORTHO05D008636 4.3e-13 78.6 98 48.0
Sp5g04010 Schrenkiella parvula HOM05D006973 ORTHO05D008636 4.3e-13 78.6 75 57.3
Sed0009997 Sechium edule HOM05D006973 ORTHO05D008636 4.3e-13 78.6 67 61.2
Aqoxy4G00147 Aquilegia oxysepala HOM05D006973 ORTHO05D008636 5.7e-13 78.2 92 44.6
BraA05t19306Z Brassica rapa HOM05D006973 ORTHO05D008636 7.4e-13 77.8 70 52.9
Glyma.02G286900 Glycine max HOM05D006973 ORTHO05D008636 7.4e-13 77.8 69 56.5
VMungo0647G1950 Vigna mungo HOM05D006973 ORTHO05D008636 1.3e-12 77.0 129 42.6
A05p03160 Brassica napus HOM05D006973 ORTHO05D008636 2.1e-12 76.3 70 52.9
Phvul.008G191400 Phaseolus vulgaris HOM05D006973 ORTHO05D008636 2.8e-12 75.9 65 60.0
Carub.0004s2531 Capsella rubella HOM05D006973 ORTHO05D008636 3.7e-12 75.5 69 53.6
Glyma.14G028000 Glycine max HOM05D006973 ORTHO05D008636 4.8e-12 75.1 64 60.9
Lalb_Chr04g0248771 Lupinus albus HOM05D006973 ORTHO05D008636 6.3e-12 74.7 61 63.9
BcaC02g12446 Brassica carinata HOM05D006973 ORTHO05D008636 8.2e-12 74.3 70 51.4
C04p03810 Brassica napus HOM05D006973 ORTHO05D008636 8.2e-12 74.3 70 51.4
BolC4t22017H Brassica oleracea HOM05D006973 ORTHO05D008636 8.2e-12 74.3 70 51.4
Carub.0005s2563 Capsella rubella HOM05D006973 ORTHO05D008636 8.2e-12 74.3 61 62.3
DCAR_013315 Daucus carota HOM05D006973 ORTHO05D008636 8.2e-12 74.3 111 50.5
Medtr5g091690 Medicago truncatula HOM05D006973 ORTHO05D008636 1.1e-11 73.9 66 57.6
AL5G40650 Arabidopsis lyrata HOM05D006973 ORTHO05D008636 1.4e-11 73.6 61 60.7
BolC3t15210H Brassica oleracea HOM05D006973 ORTHO05D008636 2.4e-11 72.8 71 50.7
AT2G42870 Arabidopsis thaliana HOM05D006973 ORTHO05D008636 3.1e-11 72.4 61 59.0
CARHR137940 Cardamine hirsuta HOM05D006973 ORTHO05D008636 3.1e-11 72.4 93 47.3
AL4G41480 Arabidopsis lyrata HOM05D006973 ORTHO05D008636 4.1e-11 72.0 61 57.4
AL713U10010 Arabidopsis lyrata HOM05D006973 ORTHO05D008636 4.1e-11 72.0 61 57.4
BcaC02g10032 Brassica carinata HOM05D006973 ORTHO05D008636 4.1e-11 72.0 70 58.6
A04p02340 Brassica napus HOM05D006973 ORTHO05D008636 4.1e-11 72.0 70 58.6
C04p33710 Brassica napus HOM05D006973 ORTHO05D008636 4.1e-11 72.0 70 58.6
BolC4t24939H Brassica oleracea HOM05D006973 ORTHO05D008636 4.1e-11 72.0 70 58.6
Lalb_Chr17g0348291 Lupinus albus HOM05D006973 ORTHO05D008636 5.3e-11 71.6 65 53.8
Aa31LG1G24640 Aethionema arabicum HOM05D006973 ORTHO05D008636 6.9e-11 71.2 61 54.1
TPR.G12665 Trifolium pratense HOM05D006973 ORTHO05D008636 6.9e-11 71.2 64 56.2
C03p28410 Brassica napus HOM05D006973 ORTHO05D008636 9.0e-11 70.9 134 35.1
BraA04t15963Z Brassica rapa HOM05D006973 ORTHO05D008636 9.0e-11 70.9 70 57.1
AT3G58850 Arabidopsis thaliana HOM05D006973 ORTHO05D008636 1.2e-10 70.5 61 59.0
A09p51360 Brassica napus HOM05D006973 ORTHO05D008636 1.2e-10 70.5 70 55.7
BraA09t40577Z Brassica rapa HOM05D006973 ORTHO05D008636 1.2e-10 70.5 70 55.7
CSS0041461 Camellia sinensis var. sinensis HOM05D006973 ORTHO05D008636 1.2e-10 70.5 66 56.1
Thhalv10017430m.g Eutrema salsugineum HOM05D006973 ORTHO05D008636 1.2e-10 70.5 61 55.7
BcaB02g08235 Brassica carinata HOM05D006973 ORTHO05D008636 1.5e-10 70.1 76 55.3
BcaC07g40229 Brassica carinata HOM05D006973 ORTHO05D008636 1.5e-10 70.1 70 52.9
CARHR169260 Cardamine hirsuta HOM05D006973 ORTHO05D008636 2.6e-10 69.3 96 43.8
Sp4g25000 Schrenkiella parvula HOM05D006973 ORTHO05D008636 3.4e-10 68.9 70 50.0
Lalb_Chr10g0106711 Lupinus albus HOM05D006973 ORTHO05D008636 7.6e-10 67.8 62 53.2
LjContig00310g0018130 Lotus japonicus HOM05D006973 ORTHO05D008636 1.0e-09 67.4 133 39.8
BcaB01g03419 Brassica carinata HOM05D006973 ORTHO05D008636 1.3e-09 67.0 59 54.2
CDE04G0049 Ceratophyllum demersum HOM05D006973 ORTHO05D008636 1.7e-09 66.6 97 37.1
BcaC07g40299 Brassica carinata HOM05D006973 ORTHO05D008636 5.0e-09 65.1 107 39.3
C08p34140 Brassica napus HOM05D006973 ORTHO05D008636 5.0e-09 65.1 107 39.3
BolC8t51013H Brassica oleracea HOM05D006973 ORTHO05D008636 5.0e-09 65.1 107 39.3
arahy.Tifrunner.gnm1.ann1.D7Q1BT Arachis hypogaea HOM05D006973 ORTHO05D008636 3.6e-07 58.9 49 61.2
arahy.Tifrunner.gnm1.ann1.SG1KTY Arachis hypogaea HOM05D006973 ORTHO05D008636 3.6e-07 58.9 49 61.2
arahy.Tifrunner.gnm1.ann1.9T2B0R Arachis hypogaea HOM05D006973 ORTHO05D008636 4.6e-07 58.5 49 61.2
MBI10_g03529_MAGBIO Magnolia biondii HOM05D006973 ORTHO05D008636 1.8e-06 56.6 87 36.8
Eucgr.A01970 Eucalyptus grandis HOM05D006973 ORTHO05D008636 2.3e-06 56.2 140 35.7
THA.LOC104803237 Tarenaya hassleriana HOM05D006973 ORTHO05D008636 3.9e-06 55.5 59 47.5
ATR0064G025 Amborella trichopoda HOM05D007413 ORTHO05D009357 6.7e-06 54.7 47 48.9
Os01g0630300 Oryza sativa ssp. japonica HOM05D006973 ORTHO05D008636 8.7e-06 54.3 50 44.0


User provided reference genes

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