Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu039814.1 Olea europaea HOM05D000978 ORTHO05D291286 5.5e-93 344.4 181 100.0
Dinv09383 Davidia involucrata HOM05D000978 ORTHO05D000813 2.6e-26 122.9 180 46.7
Dinv18835 Davidia involucrata HOM05D000978 ORTHO05D000813 1.1e-24 117.5 184 44.6
Peaxi162Scf00624g00085 Petunia axillaris HOM05D000978 ORTHO05D000813 2.5e-21 106.3 183 43.2
QL01p019775 Quercus lobata HOM05D000978 ORTHO05D000813 4.3e-21 105.5 154 43.5
MSTRG.21013 Avicennia marina HOM05D000978 ORTHO05D000813 9.5e-21 104.4 180 45.0
Nitab4.5_0000380g0090 Nicotiana tabacum HOM05D000978 ORTHO05D000813 1.6e-20 103.6 185 42.7
PGSC0003DMG400019624 Solanum tuberosum HOM05D000978 ORTHO05D000813 1.1e-19 100.9 183 42.1
CAN.G689.20 Capsicum annuum HOM05D000978 ORTHO05D000813 2.6e-18 96.3 181 38.7
Actinidia24252 Actinidia chinensis HOM05D000978 ORTHO05D000813 4.4e-18 95.5 184 38.6
Nitab4.5_0001491g0090 Nicotiana tabacum HOM05D000978 ORTHO05D000813 4.4e-18 95.5 185 42.7
Solyc11g068960.2 Solanum lycopersicum HOM05D000978 ORTHO05D000813 7.5e-18 94.7 185 40.0
Sopen11g027670 Solanum pennellii HOM05D000978 ORTHO05D000813 2.2e-17 93.2 185 39.5
Actinidia37060 Actinidia chinensis HOM05D000978 ORTHO05D000813 4.9e-17 92.0 177 37.9
MSTRG.17682 Avicennia marina HOM05D000978 ORTHO05D000813 4.1e-16 89.0 184 37.0
CSS0038620 Camellia sinensis var. sinensis HOM05D000978 ORTHO05D000813 4.1e-16 89.0 179 38.5
Actinidia35482 Actinidia chinensis HOM05D000978 ORTHO05D000813 1.2e-15 87.4 163 38.0
CSS0008992 Camellia sinensis var. sinensis HOM05D000978 ORTHO05D000813 1.2e-15 87.4 179 38.5
Peaxi162Scf00098g00024 Petunia axillaris HOM05D000978 ORTHO05D000813 3.5e-15 85.9 186 40.9
MSTRG.12387 Avicennia marina HOM05D000978 ORTHO05D000813 4.6e-15 85.5 182 37.4
DCAR_012241 Daucus carota HOM05D000978 ORTHO05D000813 6.0e-15 85.1 182 33.0
CSS0042975 Camellia sinensis var. sinensis HOM05D000978 ORTHO05D000813 1.3e-14 84.0 155 38.7
CSS0047767 Camellia sinensis var. sinensis HOM05D000978 ORTHO05D000813 1.3e-14 84.0 155 38.7
Thecc.09G272600 Theobroma cacao HOM05D000978 ORTHO05D000813 1.7e-14 83.6 157 36.9
Cfa010170 Carpinus fangiana HOM05D000978 ORTHO05D000813 3.0e-14 82.8 156 36.5
Oeu009043.2 Olea europaea HOM05D000978 ORTHO05D000813 3.9e-14 82.4 184 38.0
Cc01_g07640 Coffea canephora HOM05D000978 ORTHO05D000813 6.6e-14 81.6 180 37.2
Oeu048834.2 Olea europaea HOM05D000978 ORTHO05D000813 6.6e-14 81.6 184 37.0
Lj1C267T8 Lonicera japonica HOM05D000978 ORTHO05D000813 8.6e-14 81.3 119 42.0
MD11G1173100 Malus domestica HOM05D000978 ORTHO05D000813 4.3e-13 79.0 180 34.4
PGSC0003DMG400005894 Solanum tuberosum HOM05D000978 ORTHO05D000813 5.6e-13 78.6 182 36.8
Haze_23556 Corylus avellana HOM05D000978 ORTHO05D000813 9.6e-13 77.8 143 36.4
Duzib150G0471 Durio zibethinus HOM05D000978 ORTHO05D000813 9.6e-13 77.8 146 35.6
Atru.chr3.3115 Acer truncatum HOM05D000978 ORTHO05D000813 1.6e-12 77.0 145 38.6
Sopen06g030540 Solanum pennellii HOM05D000978 ORTHO05D000813 2.1e-12 76.6 180 36.7
Sabra16G0126900 Salix brachista HOM05D000978 ORTHO05D000813 3.6e-12 75.9 180 32.8
Nitab4.5_0010113g0010 Nicotiana tabacum HOM05D000978 ORTHO05D000813 4.7e-12 75.5 186 38.7
Prupe.6G144300 Prunus persica HOM05D000978 ORTHO05D000813 4.7e-12 75.5 180 32.8
SalBow6G4065 Salvia bowleyana HOM05D000978 ORTHO05D000813 4.7e-12 75.5 181 39.8
Duzib170G0301 Durio zibethinus HOM05D000978 ORTHO05D000813 1.4e-11 73.9 95 43.2
Potri.001G216900 Populus trichocarpa HOM05D000978 ORTHO05D000813 1.8e-11 73.6 173 32.9
CAN.G1726.1 Capsicum annuum HOM05D000978 ORTHO05D000813 3.1e-11 72.8 180 35.6
MSTRG.18788 Avicennia marina HOM05D000978 ORTHO05D000813 4.0e-11 72.4 184 34.8
Oeu029213.1 Olea europaea HOM05D000978 ORTHO05D000813 4.0e-11 72.4 183 38.8
Solyc06g074110.3 Solanum lycopersicum HOM05D000978 ORTHO05D000813 1.2e-10 70.9 178 34.3
COL.COLO4_37849 Corchorus olitorius HOM05D000978 ORTHO05D000813 1.5e-10 70.5 189 32.8
Manes.04G060100 Manihot esculenta HOM05D000978 ORTHO05D000813 1.5e-10 70.5 115 41.7
Cpa.g.sc103.8 Carica papaya HOM05D000978 ORTHO05D000813 2.0e-10 70.1 103 40.8
FAN25G0139 Fragaria x ananassa HOM05D000978 ORTHO05D000813 7.6e-10 68.2 152 31.6
Duzib168G0251 Durio zibethinus HOM05D000978 ORTHO05D000813 9.9e-10 67.8 136 33.1
MD03G1155700 Malus domestica HOM05D000978 ORTHO05D000813 9.9e-10 67.8 178 28.7
FvH4_3g26430 Fragaria vesca HOM05D000978 ORTHO05D000813 2.2e-09 66.6 152 30.9
FAN11G1728 Fragaria x ananassa HOM05D000978 ORTHO05D000813 2.2e-09 66.6 152 30.9
RcHm_v2.0_Chr5g0048491 Rosa chinensis HOM05D000978 ORTHO05D000813 2.9e-09 66.2 152 30.9
TAR636G0076 Trochodendron aralioides HOM05D000978 ORTHO05D000813 2.9e-09 66.2 183 31.7
vmacro14321 Vaccinium macrocarpon HOM05D000978 ORTHO05D000813 3.8e-09 65.9 161 31.7
GSVIVG01037572001 Vitis vinifera HOM05D000978 ORTHO05D000813 3.8e-09 65.9 77 46.8
FAN21G1547 Fragaria x ananassa HOM05D000978 ORTHO05D000813 6.4e-09 65.1 152 30.9
TAR633G0790 Trochodendron aralioides HOM05D000978 ORTHO05D000813 1.1e-08 64.3 182 35.7
Potri.009G017700 Populus trichocarpa HOM05D000978 ORTHO05D000813 1.4e-08 63.9 156 32.1
Gohir.D09G098500 Gossypium hirsutum HOM05D000978 ORTHO05D000813 1.9e-08 63.5 134 32.1
CiPaw.13G129400 Carya illinoinensis HOM05D000978 ORTHO05D000813 2.4e-08 63.2 156 34.6
Gorai.006G115500 Gossypium raimondii HOM05D000978 ORTHO05D000813 9.3e-08 61.2 134 31.3
Ciclev10029797m.g Citrus clementina HOM05D000978 ORTHO05D000813 1.2e-07 60.8 175 34.9
Nn2g14313 Nelumbo nucifera HOM05D000978 ORTHO05D000813 1.6e-07 60.5 182 30.8
Gohir.A09G099100 Gossypium hirsutum HOM05D000978 ORTHO05D000813 3.5e-07 59.3 129 31.8
CANSAT54G1931 Cannabis sativa HOM05D000978 ORTHO05D000813 1.0e-06 57.8 208 26.4
TWI79G0638 Tripterygium wilfordii HOM05D000978 ORTHO05D000813 1.0e-06 57.8 154 29.9
AUR62001552 Chenopodium quinoa HOM05D000978 ORTHO05D000813 2.3e-06 56.6 99 33.3
Rhsim01G0201100 Rhododendron simsii HOM05D000978 ORTHO05D000813 3.9e-06 55.8 173 30.6


User provided reference genes

Program Settings