Gene: Sopen11g027670

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g027670
  • Transcript Identifier Sopen11g027670.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 63289798-63296261 : positive

Gene Family Information

  • ID HOM05D000978
  • #Genes/#Species 614/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g027670.1

Descriptions

  • Description Encodes a nuclear-localized transcriptional activator with weak sequence similarity to basic helix-loop-helix(bHLH)-domain proteins. It promotes the production of stele cells in root meristems and is required to establish and maintain the normal vascular cell number and pattern in primary and lateral roots. | LONESOME HIGHWAY (LHW) | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain | BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase WNK (With No Lysine)-related
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0090058
ISO
PLAZA Integrative Orthologymetaxylem development AT1G64625
GO:0007140
ISO
PLAZA Integrative Orthologymale meiotic nuclear division AT1G64625
GO:0048316
ISO
PLAZA Integrative Orthologyseed development AT1G64625
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT2G27230
GO:0051321
ISO
PLAZA Integrative Orthologymeiotic cell cycle AT1G64625
GO:0071365
ISO
PLAZA Integrative Orthologycellular response to auxin stimulus AT1G64625
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT2G27230
GO:0010479
ISO
PLAZA Integrative Orthologystele development AT2G27230
GO:0010078
ISO
PLAZA Integrative Orthologymaintenance of root meristem identity AT2G27230
GO:0010089
ISO
PLAZA Integrative Orthologyxylem development AT2G27230

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT2G27230
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G64625

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G27230

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043561 Transcription factor LHW-like
IPR025610 Transcription factor MYC/MYB N-terminal
Mapman id Description
35.1 not assigned.annotated