Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu039601.1 Olea europaea HOM05D007304 ORTHO05D009233 2.1e-120 435.6 211 100.0
SalBow6G2896 Salvia bowleyana HOM05D007304 ORTHO05D009233 1.4e-84 316.6 217 69.6
MSTRG.22445 Avicennia marina HOM05D007304 ORTHO05D009233 3.0e-82 308.9 216 70.4
Migut.N03345 Erythranthe guttata HOM05D007304 ORTHO05D009233 2.8e-80 302.4 216 69.4
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 8.1e-80 300.8 217 66.4
SGA_v2.0_scaffold149G36602 Striga asiatica HOM05D007304 ORTHO05D009233 4.0e-79 298.5 211 68.7
CSS0049262 Camellia sinensis var. sinensis HOM05D007304 ORTHO05D009233 3.2e-76 288.9 214 65.9
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 9.3e-76 287.3 217 64.1
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 3.5e-75 285.4 217 63.6
Manes.02G191500 Manihot esculenta HOM05D007304 ORTHO05D009233 1.3e-74 283.5 217 63.1
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 1.7e-74 283.1 216 63.0
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 8.7e-74 280.8 181 69.6
Potri.013G113500 Populus trichocarpa HOM05D007304 ORTHO05D009233 1.6e-72 276.6 216 63.4
RhsimUnG0069500 Rhododendron simsii HOM05D007304 ORTHO05D009233 1.2e-70 270.4 214 62.6
Duzib177G0769 Durio zibethinus HOM05D007304 ORTHO05D009233 1.5e-70 270.0 216 61.1
GSVIVG01034475001 Vitis vinifera HOM05D007304 ORTHO05D009233 1.5e-70 270.0 213 61.5
CANSAT25G3778 Cannabis sativa HOM05D007304 ORTHO05D009233 4.4e-70 268.5 215 60.5
Sed0026932 Sechium edule HOM05D007304 ORTHO05D009233 4.4e-70 268.5 221 59.7
MD05G1041300 Malus domestica HOM05D007304 ORTHO05D009233 5.8e-70 268.1 195 64.1
Rhsim11G0060100 Rhododendron simsii HOM05D007304 ORTHO05D009233 7.6e-70 267.7 214 62.1
Sopen11g009380 Solanum pennellii HOM05D007304 ORTHO05D009233 7.6e-70 267.7 218 62.4
COL.COLO4_22675 Corchorus olitorius HOM05D007304 ORTHO05D009233 1.7e-69 266.5 207 60.9
FAN04G0833 Fragaria x ananassa HOM05D007304 ORTHO05D009233 6.4e-69 264.6 214 58.9
Gorai.005G074700 Gossypium raimondii HOM05D007304 ORTHO05D009233 6.4e-69 264.6 211 61.6
RcHm_v2.0_Chr7g0219041 Rosa chinensis HOM05D007304 ORTHO05D009233 6.4e-69 264.6 214 58.9
FAN13G2406 Fragaria x ananassa HOM05D007304 ORTHO05D009233 1.1e-68 263.8 214 58.9
ClCG11G008190 Citrullus lanatus HOM05D007304 ORTHO05D009233 1.9e-68 263.1 217 57.6
PGSC0003DMG400009226 Solanum tuberosum HOM05D007304 ORTHO05D009233 1.9e-68 263.1 218 61.5
Atru.chr13.1788 Acer truncatum HOM05D007304 ORTHO05D009233 2.4e-68 262.7 216 58.3
Atru.chr13.1792 Acer truncatum HOM05D007304 ORTHO05D009233 2.4e-68 262.7 216 58.3
FvH4_5g27630 Fragaria vesca HOM05D007304 ORTHO05D009233 2.4e-68 262.7 214 58.4
AUR62023569 Chenopodium quinoa HOM05D007304 ORTHO05D009233 3.2e-68 262.3 217 59.4
Gohir.A02G060400 Gossypium hirsutum HOM05D007304 ORTHO05D009233 3.2e-68 262.3 216 59.7
CAN.G1530.5 Capsicum annuum HOM05D007304 ORTHO05D009233 9.3e-68 260.8 216 61.1
Nitab4.5_0000560g0190 Nicotiana tabacum HOM05D007304 ORTHO05D009233 9.3e-68 260.8 218 62.8
MELO3C008119.2 Cucumis melo HOM05D007304 ORTHO05D009233 1.2e-67 260.4 217 58.1
Peaxi162Scf00310g00614 Petunia axillaris HOM05D007304 ORTHO05D009233 1.2e-67 260.4 219 62.6
TAR376G0332 Trochodendron aralioides HOM05D007304 ORTHO05D009233 1.6e-67 260.0 223 59.2
CsaV3_2G033470 Cucumis sativus L. HOM05D007304 ORTHO05D009233 4.6e-67 258.5 217 57.6
Ciclev10002467m.g Citrus clementina HOM05D007304 ORTHO05D009233 1.0e-66 257.3 216 57.9
Nitab4.5_0000422g0040 Nicotiana tabacum HOM05D007304 ORTHO05D009233 1.7e-66 256.5 219 61.6
AUR62004650 Chenopodium quinoa HOM05D007304 ORTHO05D009233 3.9e-66 255.4 214 59.8
Glyma.20G175900 Glycine max HOM05D007304 ORTHO05D009233 3.9e-66 255.4 217 57.6
EL10Ac8g20249 Beta vulgaris HOM05D007304 ORTHO05D009233 1.1e-65 253.8 217 59.0
Hund27084 Selenicereus undatus HOM05D007304 ORTHO05D009233 1.1e-65 253.8 216 60.6
Phvul.007G089900 Phaseolus vulgaris HOM05D007304 ORTHO05D009233 2.5e-65 252.7 218 57.3
Cc10_g11390 Coffea canephora HOM05D007304 ORTHO05D009233 3.3e-65 252.3 193 62.7
Dinv41708 Davidia involucrata HOM05D007304 ORTHO05D009233 3.3e-65 252.3 204 61.8
Lalb_Chr06g0162071 Lupinus albus HOM05D007304 ORTHO05D009233 3.3e-65 252.3 217 56.7
TPR.G8829 Trifolium pratense HOM05D007304 ORTHO05D009233 5.6e-65 251.5 218 57.3
arahy.Tifrunner.gnm1.ann1.E78XAF Arachis hypogaea HOM05D007304 ORTHO05D009233 2.1e-64 249.6 214 57.5
arahy.Tifrunner.gnm1.ann1.W17VPE Arachis hypogaea HOM05D007304 ORTHO05D009233 2.1e-64 249.6 214 57.5
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 2.8e-64 249.2 189 63.5
Lj5g0021067 Lotus japonicus HOM05D007304 ORTHO05D009233 3.6e-64 248.8 219 54.3
THA.LOC104816302 Tarenaya hassleriana HOM05D007304 ORTHO05D009233 3.6e-64 248.8 211 57.8
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 6.2e-64 248.1 199 62.3
PSO063G3154 Papaver somniferum HOM05D007304 ORTHO05D009233 6.2e-64 248.1 213 60.6
Ah.07g202740 Amaranthus hybridus HOM05D007304 ORTHO05D009233 1.8e-63 246.5 213 57.3
DCAR_011537 Daucus carota HOM05D007304 ORTHO05D009233 3.1e-63 245.7 167 65.9
ECA246G3843 Erigeron canadensis HOM05D007304 ORTHO05D009233 3.1e-63 245.7 217 59.0
PSO017G3329 Papaver somniferum HOM05D007304 ORTHO05D009233 3.1e-63 245.7 212 57.5
Medtr1g096340 Medicago truncatula HOM05D007304 ORTHO05D009233 4.0e-63 245.4 213 55.4
VMungo0720G1999 Vigna mungo HOM05D007304 ORTHO05D009233 5.3e-63 245.0 217 56.2
Psat6g187320 Pisum sativum HOM05D007304 ORTHO05D009233 6.9e-63 244.6 219 55.3
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 6.9e-63 244.6 188 61.7
Nn5g27732 Nelumbo nucifera HOM05D007304 ORTHO05D009233 9.0e-63 244.2 159 67.3
Ca_10612_v3 Cicer arietinum L. HOM05D007304 ORTHO05D009233 1.5e-62 243.4 217 56.2
Lj4P501T9 Lonicera japonica HOM05D007304 ORTHO05D009233 1.5e-62 243.4 174 65.5
MBI17_g27205_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 2.6e-62 242.7 225 56.9
Lsat_1_v5_gn_6_109640 Lactuca sativa HOM05D007304 ORTHO05D009233 2.9e-61 239.2 210 57.1
HanXRQChr05g0150521 Helianthus annuus HOM05D007304 ORTHO05D009233 4.9e-61 238.4 214 56.5
TWI32G0836 Tripterygium wilfordii HOM05D007304 ORTHO05D009233 2.4e-60 236.1 215 55.8
Aqoxy5G02599 Aquilegia oxysepala HOM05D007304 ORTHO05D009233 4.2e-60 235.3 158 67.1
AL6G43210 Arabidopsis lyrata HOM05D007304 ORTHO05D009233 3.0e-58 229.2 219 52.5
AT4G09620 Arabidopsis thaliana HOM05D007304 ORTHO05D009233 5.1e-58 228.4 219 53.9
Carub.0006s2806 Capsella rubella HOM05D007304 ORTHO05D009233 6.7e-58 228.0 219 53.9
PGR102G2268 Punica granatum HOM05D007304 ORTHO05D009233 8.7e-58 227.6 223 52.0
CARHR260470 Cardamine hirsuta HOM05D007304 ORTHO05D009233 4.3e-57 225.3 213 55.4
Thhalv10028979m.g Eutrema salsugineum HOM05D007304 ORTHO05D009233 5.6e-57 224.9 214 53.7
Sp6g07990 Schrenkiella parvula HOM05D007304 ORTHO05D009233 3.7e-56 222.2 218 52.8
A03p28640 Brassica napus HOM05D007304 ORTHO05D009233 8.1e-56 221.1 225 52.4
BcaC01g04711 Brassica carinata HOM05D007304 ORTHO05D009233 1.1e-55 220.7 219 53.0
BraA03t12064Z Brassica rapa HOM05D007304 ORTHO05D009233 1.4e-55 220.3 225 52.4
C03p34620 Brassica napus HOM05D007304 ORTHO05D009233 2.4e-55 219.5 219 52.5
BolC3t15773H Brassica oleracea HOM05D007304 ORTHO05D009233 2.4e-55 219.5 219 52.5
Aa31LG9G14900 Aethionema arabicum HOM05D007304 ORTHO05D009233 3.8e-53 212.2 216 51.4
Sc26g0000380 Simmondsia chinensis HOM05D007304 ORTHO05D009233 1.4e-52 210.3 194 47.9
SEGI_32747 Sequoiadendron giganteum HOM05D007304 ORTHO05D009233 1.6e-51 206.8 140 66.4
HPP92_003142 Vanilla planifolia HOM05D007304 ORTHO05D009233 1.6e-51 206.8 137 67.9
Eucgr.F04126 Eucalyptus grandis HOM05D007304 ORTHO05D009233 1.1e-49 200.7 193 52.8
Zm00001eb063940 Zea mays HOM05D007304 ORTHO05D009233 1.5e-49 200.3 228 49.6
Os03g0838900 Oryza sativa ssp. japonica HOM05D007304 ORTHO05D009233 1.6e-48 196.8 219 46.6
unitig_21.g20192 Utricularia gibba HOM05D007304 ORTHO05D009233 5.8e-46 188.3 151 60.3
SMO200G0124 Selaginella moellendorffii HOM05D007304 ORTHO05D009233 1.3e-40 170.6 134 53.7
Mapoly0175s0009 Marchantia polymorpha HOM05D007304 ORTHO05D009233 1.8e-39 166.8 143 49.0
Cpa.g.sc66.48 Carica papaya HOM05D007304 ORTHO05D009233 4.1e-39 165.6 124 60.5
SalBow6G1917 Salvia bowleyana HOM05D007304 ORTHO05D009233 4.5e-38 162.2 138 58.0
AagrBONN_evm.TU.Sc2ySwM_117.12 Anthoceros agrestis HOM05D007304 ORTHO05D009233 3.2e-36 156.0 143 49.0
Prupe.8G057100 Prunus persica HOM05D007304 ORTHO05D009233 3.9e-34 149.1 142 52.1
BcaB01g02784 Brassica carinata HOM05D007304 ORTHO05D009233 5.7e-33 145.2 227 38.8
Pp3c24_12240 Physcomitrium patens HOM05D007304 ORTHO05D009233 9.7e-33 144.4 166 42.2
CDE02G2755 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 1.0e-29 134.4 82 75.6
Cre10.g445100 Chlamydomonas reinhardtii HOM05D007304 ORTHO05D009233 4.4e-25 119.0 153 35.9
MCO03G180 Micromonas commoda HOM05D007304 ORTHO05D009233 3.7e-24 115.9 156 42.3
Solyc11g017430.3 Solanum lycopersicum HOM05D007304 ORTHO05D009233 2.9e-21 106.3 52 86.5
MBI11_g39361_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 2.2e-16 90.1 54 79.6
MD10G1047700 Malus domestica HOM05D007304 ORTHO05D009233 1.7e-13 80.5 44 81.8
Zm00001eb272990 Zea mays HOM05D007304 ORTHO05D009233 3.1e-07 59.7 72 45.8


User provided reference genes

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