Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu039594.1 Olea europaea HOM05D003762 ORTHO05D004374 4.4e-116 421.4 224 100.0
Oeu056611.1 Olea europaea HOM05D003762 ORTHO05D004374 8.0e-86 320.9 169 98.8
MSTRG.11877 Avicennia marina HOM05D003762 ORTHO05D004374 2.6e-68 262.7 170 81.2
Cc08_g05300 Coffea canephora HOM05D003762 ORTHO05D004374 3.5e-57 225.7 171 67.3
Migut.J01128 Erythranthe guttata HOM05D003762 ORTHO05D004374 1.2e-54 217.2 169 67.5
SGA_v2.0_scaffold146G36137 Striga asiatica HOM05D003762 ORTHO05D004374 1.5e-52 210.3 169 66.3
SGA_v2.0_scaffold120G32921 Striga asiatica HOM05D003762 ORTHO05D004374 2.1e-49 199.9 163 65.0
CAN.G1683.1 Capsicum annuum HOM05D003762 ORTHO05D004374 3.0e-48 196.1 171 59.1
CAN.G2872.1 Capsicum annuum HOM05D003762 ORTHO05D004374 3.0e-48 196.1 171 59.1
CAN.G812.32 Capsicum annuum HOM05D003762 ORTHO05D004374 3.0e-48 196.1 171 59.1
Nitab4.5_0000255g0050 Nicotiana tabacum HOM05D003762 ORTHO05D004374 3.9e-48 195.7 171 59.6
Nitab4.5_0000898g0100 Nicotiana tabacum HOM05D003762 ORTHO05D004374 5.6e-47 191.8 171 58.5
Peaxi162Scf00053g00522 Petunia axillaris HOM05D003762 ORTHO05D004374 2.1e-46 189.9 171 59.6
Nn1g05222 Nelumbo nucifera HOM05D003762 ORTHO05D004374 2.8e-46 189.5 174 56.9
GSVIVG01004444001 Vitis vinifera HOM05D003762 ORTHO05D004374 2.8e-46 189.5 171 57.9
GSVIVG01017309001 Vitis vinifera HOM05D003762 ORTHO05D004374 2.4e-45 186.4 171 56.7
Dinv08128 Davidia involucrata HOM05D003762 ORTHO05D004374 4.0e-45 185.7 169 56.8
Sopen08g024260 Solanum pennellii HOM05D003762 ORTHO05D004374 2.6e-44 183.0 169 56.2
Hma1.2p1_0515F.1_g170140 Hydrangea macrophylla HOM05D003762 ORTHO05D004374 3.4e-44 182.6 169 57.4
QL01p011549 Quercus lobata HOM05D003762 ORTHO05D004374 4.4e-44 182.2 171 53.8
Actinidia15994 Actinidia chinensis HOM05D003762 ORTHO05D004374 5.8e-44 181.8 169 56.8
PGSC0003DMG402007612 Solanum tuberosum HOM05D003762 ORTHO05D004374 5.8e-44 181.8 169 56.2
CiPaw.09G152500 Carya illinoinensis HOM05D003762 ORTHO05D004374 1.7e-43 180.3 171 56.1
Potri.018G000800 Populus trichocarpa HOM05D003762 ORTHO05D004374 2.9e-43 179.5 171 55.6
Cfa001979 Carpinus fangiana HOM05D003762 ORTHO05D004374 4.9e-43 178.7 171 55.0
Haze_16536 Corylus avellana HOM05D003762 ORTHO05D004374 1.4e-42 177.2 171 54.4
Phvul.008G021700 Phaseolus vulgaris HOM05D003762 ORTHO05D004374 1.9e-42 176.8 171 55.0
CSS0038493 Camellia sinensis var. sinensis HOM05D003762 ORTHO05D004374 9.3e-42 174.5 169 54.4
Potri.001G003700 Populus trichocarpa HOM05D003762 ORTHO05D004374 1.2e-41 174.1 171 53.2
ECA246G1447 Erigeron canadensis HOM05D000759 ORTHO05D000574 1.6e-41 173.7 161 55.9
CSS0030442 Camellia sinensis var. sinensis HOM05D003762 ORTHO05D004374 2.1e-41 173.3 169 54.4
Manes.04G114300 Manihot esculenta HOM05D003762 ORTHO05D004374 2.1e-41 173.3 164 54.3
vmacro11452 Vaccinium macrocarpon HOM05D003762 ORTHO05D004374 2.1e-41 173.3 169 55.6
Glyma.18G279200 Glycine max HOM05D003762 ORTHO05D004374 2.7e-41 172.9 171 55.0
Sabra01G0002500 Salix brachista HOM05D003762 ORTHO05D004374 4.6e-41 172.2 171 53.2
Potri.003G033600 Populus trichocarpa HOM05D003762 ORTHO05D004374 7.9e-41 171.4 172 52.9
Rhsim05G0080000 Rhododendron simsii HOM05D003762 ORTHO05D004374 1.0e-40 171.0 169 53.8
Rhsim11G0183700 Rhododendron simsii HOM05D003762 ORTHO05D004374 1.0e-40 171.0 169 53.3
VMungo1383G0008 Vigna mungo HOM05D003762 ORTHO05D004374 2.3e-40 169.9 171 54.4
arahy.Tifrunner.gnm1.ann1.VKA3KK Arachis hypogaea HOM05D003762 ORTHO05D004374 3.9e-40 169.1 164 57.3
arahy.Tifrunner.gnm1.ann1.IN3X4V Arachis hypogaea HOM05D003762 ORTHO05D004374 6.6e-40 168.3 164 57.3
Duzib160G0900 Durio zibethinus HOM05D003762 ORTHO05D004374 2.5e-39 166.4 169 52.7
Cpa.g.sc37.21 Carica papaya HOM05D003762 ORTHO05D004374 3.3e-39 166.0 161 56.5
Lj1g0002607 Lotus japonicus HOM05D003762 ORTHO05D004374 5.6e-39 165.2 169 51.5
Atru.chr1.3040 Acer truncatum HOM05D003762 ORTHO05D004374 9.6e-39 164.5 169 49.7
PGSC0003DMG400003846 Solanum tuberosum HOM05D003762 ORTHO05D004374 9.6e-39 164.5 174 52.9
Oeu056610.1 Olea europaea HOM05D003762 ORTHO05D004374 1.6e-38 163.7 85 98.8
Thecc.06G021200 Theobroma cacao HOM05D003762 ORTHO05D004374 1.6e-38 163.7 169 50.9
CANSAT35G0296 Cannabis sativa HOM05D003762 ORTHO05D004374 2.1e-38 163.3 170 52.9
Lsat_1_v5_gn_3_23460 Lactuca sativa HOM05D003762 ORTHO05D004374 2.8e-38 162.9 162 51.9
Ciclev10026399m.g Citrus clementina HOM05D003762 ORTHO05D004374 1.4e-37 160.6 163 52.1
ClCG02G018290 Citrullus lanatus HOM05D003762 ORTHO05D004374 5.3e-37 158.7 172 50.0
Eucgr.F01771 Eucalyptus grandis HOM05D003762 ORTHO05D004374 9.0e-37 157.9 161 49.1
Eucgr.J01004 Eucalyptus grandis HOM05D003762 ORTHO05D004374 1.2e-36 157.5 163 49.7
Psat4g001640 Pisum sativum HOM05D003762 ORTHO05D004374 1.3e-35 154.1 168 48.8
DCAR_002196 Daucus carota HOM05D003762 ORTHO05D004374 1.7e-35 153.7 171 47.4
Gohir.A02G058000 Gossypium hirsutum HOM05D003762 ORTHO05D004374 1.7e-35 153.7 159 49.1
Gorai.005G071700 Gossypium raimondii HOM05D003762 ORTHO05D004374 3.8e-35 152.5 159 48.4
ClCG00G001180 Citrullus lanatus HOM05D003762 ORTHO05D004374 8.4e-35 151.4 174 47.1
ClCG10G003800 Citrullus lanatus HOM05D003762 ORTHO05D004374 8.4e-35 151.4 174 47.1
Ca_06841_v3 Cicer arietinum L. HOM05D003762 ORTHO05D004374 1.1e-34 151.0 164 48.8
MELO3C014058.2 Cucumis melo HOM05D003762 ORTHO05D004374 1.1e-34 151.0 174 47.1
Lsat_1_v5_gn_3_23440 Lactuca sativa HOM05D003762 ORTHO05D004374 1.1e-34 151.0 162 50.6
TWI56G0980 Tripterygium wilfordii HOM05D003762 ORTHO05D004374 1.4e-34 150.6 171 45.6
Gohir.D02G063800 Gossypium hirsutum HOM05D003762 ORTHO05D004374 2.4e-34 149.8 159 47.8
MELO3C007348.2 Cucumis melo HOM05D003762 ORTHO05D004374 3.2e-34 149.4 174 46.6
CsaV3_3G003760 Cucumis sativus L. HOM05D003762 ORTHO05D004374 5.5e-34 148.7 174 46.6
Prupe.5G067300 Prunus persica HOM05D003762 ORTHO05D004374 5.5e-34 148.7 164 47.0
Prupe.1G576300 Prunus persica HOM05D003762 ORTHO05D004374 1.2e-33 147.5 164 47.0
Sed0021000 Sechium edule HOM05D003762 ORTHO05D004374 1.2e-33 147.5 166 47.6
TWI36G0443 Tripterygium wilfordii HOM05D003762 ORTHO05D004374 1.2e-33 147.5 162 47.5
COL.COLO4_12944 Corchorus olitorius HOM05D003762 ORTHO05D004374 1.6e-33 147.1 175 44.6
TPR.G19896 Trifolium pratense HOM05D003762 ORTHO05D004374 2.1e-33 146.7 168 47.0
HPP92_015034 Vanilla planifolia HOM05D003762 ORTHO05D004374 2.7e-33 146.4 158 50.6
Aqoxy6G02090 Aquilegia oxysepala HOM05D003762 ORTHO05D004374 3.5e-33 146.0 165 47.9
HanXRQChr17g0537091 Helianthus annuus HOM05D003762 ORTHO05D004374 3.5e-33 146.0 131 57.3
Peaxi162Scf00573g00044 Petunia axillaris HOM05D003762 ORTHO05D004374 3.5e-33 146.0 150 51.3
MBI14_g44482_MAGBIO Magnolia biondii HOM05D003762 ORTHO05D004374 1.3e-32 144.1 170 46.5
RcHm_v2.0_Chr6g0271261 Rosa chinensis HOM05D003762 ORTHO05D004374 2.3e-32 143.3 169 42.0
RcHm_v2.0_Chr6g0271271 Rosa chinensis HOM05D003762 ORTHO05D004374 2.3e-32 143.3 169 42.0
FvH4_6g29950 Fragaria vesca HOM05D003762 ORTHO05D004374 8.7e-32 141.4 168 42.3
FAN05G3809 Fragaria x ananassa HOM05D003762 ORTHO05D004374 8.7e-32 141.4 168 42.3
FAN14G5252 Fragaria x ananassa HOM05D003762 ORTHO05D004374 8.7e-32 141.4 168 42.3
PGR044G0538 Punica granatum HOM05D003762 ORTHO05D004374 8.7e-32 141.4 163 46.6
TAR625G0731 Trochodendron aralioides HOM05D003762 ORTHO05D004374 8.7e-32 141.4 143 49.7
Ciclev10009494m.g Citrus clementina HOM05D003762 ORTHO05D004374 1.1e-31 141.0 133 56.4
FAN02G0052 Fragaria x ananassa HOM05D003762 ORTHO05D004374 1.1e-31 141.0 168 42.3
FAN09G0714 Fragaria x ananassa HOM05D003762 ORTHO05D004374 3.3e-31 139.4 168 41.7
MD15G1431400 Malus domestica HOM05D003762 ORTHO05D004374 5.6e-31 138.7 131 50.4
FAN02G2701 Fragaria x ananassa HOM05D003762 ORTHO05D004374 7.4e-31 138.3 172 46.5
Aqoxy6G01949 Aquilegia oxysepala HOM05D003762 ORTHO05D004374 2.8e-30 136.3 165 41.2
Lalb_Chr17g0343451 Lupinus albus HOM05D003762 ORTHO05D004374 3.7e-30 136.0 162 45.7
Ah.03g133930 Amaranthus hybridus HOM05D003762 ORTHO05D004374 6.2e-30 135.2 176 43.2
FAN09G1243 Fragaria x ananassa HOM05D003762 ORTHO05D004374 1.4e-29 134.0 172 45.9
RcHm_v2.0_Chr2g0135951 Rosa chinensis HOM05D003762 ORTHO05D004374 1.4e-29 134.0 168 40.5
AUR62024643 Chenopodium quinoa HOM05D003762 ORTHO05D004374 4.0e-29 132.5 178 41.6
HanXRQChr03g0081311 Helianthus annuus HOM05D003762 ORTHO05D004374 4.0e-29 132.5 163 46.6
Sed0000714 Sechium edule HOM05D003762 ORTHO05D004374 6.9e-29 131.7 169 43.2
FAN05G0849 Fragaria x ananassa HOM05D003762 ORTHO05D004374 1.2e-28 131.0 172 44.8
Phvul.010G127200 Phaseolus vulgaris HOM05D003762 ORTHO05D004374 1.2e-28 131.0 163 44.8
ECA240G1229 Erigeron canadensis HOM05D003762 ORTHO05D004374 1.5e-28 130.6 160 48.1
Hund13161 Selenicereus undatus HOM05D003762 ORTHO05D004374 2.0e-28 130.2 164 45.7
Lj8P331T26 Lonicera japonica HOM05D003762 ORTHO05D004374 2.6e-28 129.8 131 52.7
VMungo0331G0552 Vigna mungo HOM05D003762 ORTHO05D004374 3.4e-28 129.4 163 44.2
PSO170G1737 Papaver somniferum HOM05D003762 ORTHO05D004374 4.5e-28 129.0 174 46.6
Atru.chr1.3024 Acer truncatum HOM05D003762 ORTHO05D004374 5.8e-28 128.6 119 52.9
DCAR_030901 Daucus carota HOM05D003762 ORTHO05D004374 7.6e-28 128.3 172 41.3
PSO455G0078 Papaver somniferum HOM05D003762 ORTHO05D004374 1.7e-27 127.1 169 44.4
SalBow2G2359 Salvia bowleyana HOM05D003762 ORTHO05D004374 1.7e-27 127.1 171 41.5
arahy.Tifrunner.gnm1.ann1.1PQR27 Arachis hypogaea HOM05D003762 ORTHO05D004374 2.9e-27 126.3 146 47.3
THA.LOC104798921 Tarenaya hassleriana HOM05D003762 ORTHO05D004374 2.9e-27 126.3 162 44.4
arahy.Tifrunner.gnm1.ann1.RFRX47 Arachis hypogaea HOM05D003762 ORTHO05D004374 3.8e-27 125.9 161 44.1
arahy.Tifrunner.gnm1.ann1.3GPH34 Arachis hypogaea HOM05D003762 ORTHO05D004374 4.9e-27 125.6 146 46.6
Sc24g0003260 Simmondsia chinensis HOM05D003762 ORTHO05D004374 6.5e-27 125.2 172 43.0
TPR.G20064 Trifolium pratense HOM05D003762 ORTHO05D004374 8.4e-27 124.8 172 42.4
Glyma.07G041800 Glycine max HOM05D003762 ORTHO05D004374 9.3e-26 121.3 161 41.6
Aa31LG11G3050 Aethionema arabicum HOM05D003762 ORTHO05D004374 1.6e-25 120.6 161 41.0
FAN14G0588 Fragaria x ananassa HOM05D003762 ORTHO05D004374 2.1e-25 120.2 145 48.3
Glyma.09G089900 Glycine max HOM05D003762 ORTHO05D004374 7.9e-25 118.2 147 44.9
FvH4_6g41460 Fragaria vesca HOM05D003762 ORTHO05D004374 1.3e-24 117.5 133 52.6
AagrBONN_evm.TU.Sc2ySwM_228.1250 Anthoceros agrestis HOM05D003762 ORTHO05D004374 3.3e-23 112.8 160 35.0
A06p34610 Brassica napus HOM05D003762 ORTHO05D004374 3.3e-23 112.8 164 37.8
C07p43880 Brassica napus HOM05D003762 ORTHO05D004374 3.3e-23 112.8 164 37.2
BraA06t26389Z Brassica rapa HOM05D003762 ORTHO05D004374 3.3e-23 112.8 164 37.8
Sp2g23520 Schrenkiella parvula HOM05D003762 ORTHO05D004374 3.3e-23 112.8 163 38.7
BcaNung01845 Brassica carinata HOM05D003762 ORTHO05D004374 7.4e-23 111.7 164 37.2
BolC7t44916H Brassica oleracea HOM05D003762 ORTHO05D004374 7.4e-23 111.7 164 37.2
Aa31sc38G110 Aethionema arabicum HOM05D003762 ORTHO05D004374 1.6e-22 110.5 164 37.2
AUR62011796 Chenopodium quinoa HOM05D003762 ORTHO05D004374 4.8e-22 109.0 120 49.2
BolC9t53671H Brassica oleracea HOM05D003762 ORTHO05D004374 3.1e-21 106.3 157 40.8
BcaC04g23509 Brassica carinata HOM05D003762 ORTHO05D004374 4.1e-21 105.9 157 40.1
Pp3c22_6800 Physcomitrium patens HOM05D003762 ORTHO05D004374 6.9e-21 105.1 147 33.3
Mapoly0090s0008 Marchantia polymorpha HOM05D003762 ORTHO05D004374 9.0e-21 104.8 155 37.4
QL03p059502 Quercus lobata HOM05D003762 ORTHO05D004374 2.6e-20 103.2 163 36.8
Thhalv10005351m.g Eutrema salsugineum HOM05D003762 ORTHO05D004374 3.4e-20 102.8 165 37.0
ATR0580G255 Amborella trichopoda HOM05D003762 ORTHO05D004374 4.5e-20 102.4 144 36.8
BraA09t36329Z Brassica rapa HOM05D003762 ORTHO05D004374 4.5e-20 102.4 157 40.1
Medtr7g109780 Medicago truncatula HOM05D003762 ORTHO05D004374 4.5e-20 102.4 124 44.4
MCO15G473 Micromonas commoda HOM05D003762 ORTHO05D004374 1.7e-19 100.5 150 34.0
BcaB04g19852 Brassica carinata HOM05D003762 ORTHO05D004374 2.9e-19 99.8 164 37.8
BcaB04g19853 Brassica carinata HOM05D003762 ORTHO05D004374 2.9e-19 99.8 164 37.8
C09p07550 Brassica napus HOM05D003762 ORTHO05D004374 2.9e-19 99.8 155 38.7
A09p06830 Brassica napus HOM05D003762 ORTHO05D004374 3.8e-19 99.4 157 39.5
Solyc08g075580.3 Solanum lycopersicum HOM05D003762 ORTHO05D004374 3.8e-19 99.4 85 60.0
unitig_0.g2831 Utricularia gibba HOM05D003762 ORTHO05D004374 8.5e-19 98.2 152 36.2
CARHR189840 Cardamine hirsuta HOM05D003762 ORTHO05D004374 1.1e-18 97.8 165 33.9
AL6G34980 Arabidopsis lyrata HOM05D003762 ORTHO05D004374 1.9e-18 97.1 164 34.8
AT5G23710 Arabidopsis thaliana HOM05D003762 ORTHO05D004374 2.5e-18 96.7 164 36.6
TAR636G2311 Trochodendron aralioides HOM05D003762 ORTHO05D004374 7.2e-18 95.1 85 51.8
Carub.0006s2146 Capsella rubella HOM05D003762 ORTHO05D004374 2.1e-17 93.6 165 33.9
Medtr0003s0690 Medicago truncatula HOM05D003762 ORTHO05D004374 3.6e-17 92.8 108 42.6
QL06p036898 Quercus lobata HOM05D003762 ORTHO05D004374 6.1e-17 92.0 82 50.0
QL05p029016 Quercus lobata HOM05D003762 ORTHO05D004374 7.9e-17 91.7 82 51.2
Cre07.g314950 Chlamydomonas reinhardtii HOM05D003762 ORTHO05D004374 1.0e-16 91.3 149 32.2
Zm00001eb386260 Zea mays HOM05D003762 ORTHO05D004374 3.9e-16 89.4 144 30.6
HPP92_015113 Vanilla planifolia HOM05D003762 ORTHO05D004374 6.7e-16 88.6 84 53.6
Zm00001eb276730 Zea mays HOM05D003762 ORTHO05D004374 8.7e-16 88.2 152 30.3
vmacro16904 Vaccinium macrocarpon HOM05D003762 ORTHO05D004374 1.5e-15 87.4 83 53.0
Aqoxy6G01956 Aquilegia oxysepala HOM05D003762 ORTHO05D004374 7.4e-15 85.1 84 45.2
PRCOL_00004812 Prasinoderma coloniale HOM05D003762 ORTHO05D004374 1.3e-14 84.3 151 33.8
Atru.chr1.3022 Acer truncatum HOM05D003762 ORTHO05D004374 2.8e-14 83.2 85 47.1
PSO455G0143 Papaver somniferum HOM05D003762 ORTHO05D004374 8.2e-14 81.6 161 37.9
Nitab4.5_0009310g0070 Nicotiana tabacum HOM05D003419 ORTHO05D004374 4.1e-13 79.3 101 48.5
Atru.chr1.3033 Acer truncatum HOM05D003762 ORTHO05D004374 3.4e-12 76.3 78 46.2
Rhsim12G0192200 Rhododendron simsii HOM05D003762 ORTHO05D004374 4.5e-12 75.9 77 51.9
Zm00001eb356740 Zea mays HOM05D003762 ORTHO05D004374 1.2e-09 67.8 118 28.8
VMungo0720G1683 Vigna mungo HOM05D003762 ORTHO05D004374 1.6e-09 67.4 86 41.9
SEGI_04929 Sequoiadendron giganteum HOM05D003762 ORTHO05D004374 4.6e-09 65.9 77 41.6
TAR636G2069 Trochodendron aralioides HOM05D003762 ORTHO05D004374 8.8e-08 61.6 68 48.5
Potri.003G221301 Populus trichocarpa HOM05D003762 ORTHO05D004374 2.0e-07 60.5 125 34.4


User provided reference genes

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