Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu039587.1 Olea europaea HOM05D003677 ORTHO05D004231 1.1e-69 266.5 142 100.0
Oeu002000.1 Olea europaea HOM05D003677 ORTHO05D004231 2.2e-52 209.1 129 88.4
Migut.F01271 Erythranthe guttata HOM05D003677 ORTHO05D004231 3.9e-46 188.3 135 77.8
MSTRG.24694 Avicennia marina HOM05D003677 ORTHO05D004231 3.3e-45 185.3 134 79.1
SGA_v2.0_scaffold28G12049 Striga asiatica HOM05D003677 ORTHO05D004231 5.7e-45 184.5 134 77.6
MSTRG.24142 Avicennia marina HOM05D003677 ORTHO05D004231 7.7e-42 174.1 140 70.0
Nitab4.5_0003780g0080 Nicotiana tabacum HOM05D003677 ORTHO05D004231 3.2e-40 168.7 132 73.5
Peaxi162Scf00528g00119 Petunia axillaris HOM05D003677 ORTHO05D004231 1.4e-38 163.3 132 72.7
Sopen04g005150 Solanum pennellii HOM05D003677 ORTHO05D004231 1.4e-38 163.3 138 71.7
Solyc04g010000.3 Solanum lycopersicum HOM05D003677 ORTHO05D004231 5.2e-38 161.4 135 72.6
ClCG11G010570 Citrullus lanatus HOM05D003677 ORTHO05D004231 6.7e-38 161.0 141 71.6
Gohir.A11G247500 Gossypium hirsutum HOM05D003677 ORTHO05D004231 6.7e-38 161.0 134 74.6
CsaV3_2G009740 Cucumis sativus L. HOM05D003677 ORTHO05D004231 8.8e-38 160.6 143 70.6
PGR004G1803 Punica granatum HOM05D003677 ORTHO05D004231 8.8e-38 160.6 138 71.0
Haze_04435 Corylus avellana HOM05D003677 ORTHO05D004231 2.0e-37 159.5 137 68.6
Gohir.D11G257800 Gossypium hirsutum HOM05D003677 ORTHO05D004231 2.0e-37 159.5 134 73.9
Gorai.007G276100 Gossypium raimondii HOM05D003677 ORTHO05D004231 2.0e-37 159.5 134 73.9
Sopen04g005130 Solanum pennellii HOM05D003677 ORTHO05D004231 2.0e-37 159.5 138 69.6
Sabra13G0042900 Salix brachista HOM05D003677 ORTHO05D004231 2.6e-37 159.1 130 73.8
Cfa006347 Carpinus fangiana HOM05D003677 ORTHO05D004231 5.7e-37 157.9 137 67.9
Dinv24683 Davidia involucrata HOM05D003677 ORTHO05D004231 5.7e-37 157.9 146 65.8
Actinidia38938 Actinidia chinensis HOM05D003677 ORTHO05D004231 9.7e-37 157.1 138 71.7
Hma1.2p1_1512F.1_g287960 Hydrangea macrophylla HOM05D003677 ORTHO05D004231 9.7e-37 157.1 136 71.3
Dinv35470 Davidia involucrata HOM05D003677 ORTHO05D004231 1.3e-36 156.8 148 64.9
Cc02_g08860 Coffea canephora HOM05D003677 ORTHO05D004231 1.7e-36 156.4 131 71.8
Actinidia34752 Actinidia chinensis HOM05D003677 ORTHO05D004231 2.2e-36 156.0 139 70.5
FAN05G3813 Fragaria x ananassa HOM05D003677 ORTHO05D004231 2.8e-36 155.6 133 69.2
Manes.09G148000 Manihot esculenta HOM05D003677 ORTHO05D004231 2.8e-36 155.6 133 71.4
CANSAT54G2642 Cannabis sativa HOM05D003677 ORTHO05D004231 3.7e-36 155.2 127 70.9
Potri.013G046900 Populus trichocarpa HOM05D003677 ORTHO05D004231 3.7e-36 155.2 133 70.7
EL10Ac4g09010 Beta vulgaris HOM05D003677 ORTHO05D004231 6.3e-36 154.5 139 68.3
Potri.019G018900 Populus trichocarpa HOM05D003677 ORTHO05D004231 8.2e-36 154.1 132 69.7
Cc11_g04280 Coffea canephora HOM05D003677 ORTHO05D004231 2.4e-35 152.5 133 69.2
Lj2A42G39 Lonicera japonica HOM05D003677 ORTHO05D004231 2.4e-35 152.5 152 63.2
Sc20g0000650 Simmondsia chinensis HOM05D003677 ORTHO05D004231 2.4e-35 152.5 137 70.1
CiPaw.02G020400 Carya illinoinensis HOM05D003677 ORTHO05D004231 1.2e-34 150.2 133 69.2
Sed0020318 Sechium edule HOM05D003677 ORTHO05D004231 2.0e-34 149.4 145 67.6
Hund22161 Selenicereus undatus HOM05D003677 ORTHO05D004231 3.5e-34 148.7 138 66.7
FAN09G1189 Fragaria x ananassa HOM05D003677 ORTHO05D004231 4.5e-34 148.3 131 66.4
Nitab4.5_0010738g0010 Nicotiana tabacum HOM05D003677 ORTHO05D004231 5.9e-34 147.9 134 68.7
Atru.chr2.953 Acer truncatum HOM05D003677 ORTHO05D004231 7.7e-34 147.5 117 73.5
FAN02G0354 Fragaria x ananassa HOM05D000329 ORTHO05D000833 7.7e-34 147.5 132 67.4
Nitab4.5_0001372g0020 Nicotiana tabacum HOM05D003677 ORTHO05D004231 7.7e-34 147.5 135 68.1
Duzib106G0879 Durio zibethinus HOM05D003677 ORTHO05D004231 1.0e-33 147.1 133 66.2
unitig_61.g26069 Utricularia gibba HOM05D003677 ORTHO05D004231 1.0e-33 147.1 121 72.7
COL.COLO4_15475 Corchorus olitorius HOM05D003677 ORTHO05D004231 1.3e-33 146.7 131 67.2
Gorai.013G187700 Gossypium raimondii HOM05D003677 ORTHO05D004231 1.3e-33 146.7 127 70.1
RcHm_v2.0_Chr3g0449621 Rosa chinensis HOM05D003677 ORTHO05D004231 1.7e-33 146.4 132 65.9
Atru.chr4.2875 Acer truncatum HOM05D003677 ORTHO05D004231 2.2e-33 146.0 141 63.8
Ciclev10021882m.g Citrus clementina HOM05D003677 ORTHO05D004231 2.2e-33 146.0 134 70.1
TWI81G0231 Tripterygium wilfordii HOM05D003677 ORTHO05D004231 2.2e-33 146.0 135 69.6
Cpa.g.c35686 Carica papaya HOM05D003677 ORTHO05D004231 2.9e-33 145.6 136 67.6
TAR633G1327 Trochodendron aralioides HOM05D003677 ORTHO05D004231 3.8e-33 145.2 147 62.6
Atru.chr2.976 Acer truncatum HOM05D003677 ORTHO05D004231 5.0e-33 144.8 117 71.8
Thecc.05G271100 Theobroma cacao HOM05D003677 ORTHO05D004231 6.5e-33 144.4 130 67.7
Gohir.A13G167400 Gossypium hirsutum HOM05D003677 ORTHO05D004231 1.1e-32 143.7 136 68.4
Lsat_1_v5_gn_2_16040 Lactuca sativa HOM05D003677 ORTHO05D004231 1.1e-32 143.7 145 64.8
Sopen04g005170 Solanum pennellii HOM05D003677 ORTHO05D004231 1.5e-32 143.3 139 61.9
Hund06908 Selenicereus undatus HOM05D003677 ORTHO05D004231 2.5e-32 142.5 137 65.0
Aqoxy5G00213 Aquilegia oxysepala HOM05D003677 ORTHO05D004231 5.5e-32 141.4 148 60.1
Lsat_1_v5_gn_1_9200 Lactuca sativa HOM05D003677 ORTHO05D004231 7.2e-32 141.0 138 64.5
CSS0027708 Camellia sinensis var. sinensis HOM05D003677 ORTHO05D004231 2.1e-31 139.4 140 62.9
CSS0028631 Camellia sinensis var. sinensis HOM05D003677 ORTHO05D004231 2.1e-31 139.4 140 62.9
Nitab4.5_0002915g0010 Nicotiana tabacum HOM05D003677 ORTHO05D004231 2.1e-31 139.4 123 69.9
Nitab4.5_0000718g0030 Nicotiana tabacum HOM05D003677 ORTHO05D004231 2.7e-31 139.0 122 69.7
Nitab4.5_0000687g0030 Nicotiana tabacum HOM05D003677 ORTHO05D004231 6.1e-31 137.9 136 66.2
Rhsim09G0137200 Rhododendron simsii HOM05D003677 ORTHO05D004231 6.1e-31 137.9 145 64.1
vmacro10364 Vaccinium macrocarpon HOM05D003677 ORTHO05D004231 6.1e-31 137.9 162 59.3
PSO832G1483 Papaver somniferum HOM05D003677 ORTHO05D004231 8.0e-31 137.5 150 59.3
THA.LOC104827474 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 1.0e-30 137.1 134 63.4
AUR62004836 Chenopodium quinoa HOM05D003677 ORTHO05D004231 1.4e-30 136.7 143 62.9
PSO210G7560 Papaver somniferum HOM05D003677 ORTHO05D004231 1.4e-30 136.7 150 59.3
Psat6g142680 Pisum sativum HOM05D003677 ORTHO05D004231 1.4e-30 136.7 135 60.7
Duzib128G0961 Durio zibethinus HOM05D003677 ORTHO05D004231 1.8e-30 136.3 119 66.4
DCAR_009653 Daucus carota HOM05D003677 ORTHO05D004231 2.3e-30 136.0 129 63.6
Nn1g02804 Nelumbo nucifera HOM05D003677 ORTHO05D004231 2.3e-30 136.0 148 59.5
Nn3g19689 Nelumbo nucifera HOM05D003677 ORTHO05D004231 2.3e-30 136.0 134 61.2
Solyc04g010040.3 Solanum lycopersicum HOM05D003677 ORTHO05D004231 3.0e-30 135.6 132 61.4
MD04G1229900 Malus domestica HOM05D003677 ORTHO05D004231 4.0e-30 135.2 132 64.4
Migut.I00390 Erythranthe guttata HOM05D003677 ORTHO05D004231 6.7e-30 134.4 123 64.2
Medtr1g080150 Medicago truncatula HOM05D003677 ORTHO05D004231 1.2e-29 133.7 135 60.0
Aa31LG5G14940 Aethionema arabicum HOM05D003677 ORTHO05D004231 2.6e-29 132.5 102 69.6
PGSC0003DMG400023407 Solanum tuberosum HOM05D003677 ORTHO05D004231 2.6e-29 132.5 128 63.3
CDE04G2392 Ceratophyllum demersum HOM05D003677 ORTHO05D004231 3.3e-29 132.1 142 63.4
PSO210G0146 Papaver somniferum HOM05D003677 ORTHO05D004231 4.4e-29 131.7 116 70.7
QL03p030537 Quercus lobata HOM05D003677 ORTHO05D004231 5.7e-29 131.3 205 45.9
THA.LOC104802833 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 5.7e-29 131.3 132 60.6
MD12G1247000 Malus domestica HOM05D003677 ORTHO05D004231 7.5e-29 131.0 132 62.9
MD12G1247300 Malus domestica HOM05D003677 ORTHO05D004231 7.5e-29 131.0 132 62.9
TAR362G0866 Trochodendron aralioides HOM05D003677 ORTHO05D004231 7.5e-29 131.0 149 59.7
Glyma.10G166200 Glycine max HOM05D003677 ORTHO05D004231 9.7e-29 130.6 136 58.1
PSO210G2652 Papaver somniferum HOM05D003677 ORTHO05D004231 9.7e-29 130.6 116 69.8
ECA238G1929 Erigeron canadensis HOM05D003677 ORTHO05D004231 1.3e-28 130.2 117 65.0
Eucgr.H04231 Eucalyptus grandis HOM05D003677 ORTHO05D004231 1.3e-28 130.2 147 57.8
Glyma.20G223000 Glycine max HOM05D003677 ORTHO05D004231 1.3e-28 130.2 136 58.1
TPR.G9915 Trifolium pratense HOM05D003677 ORTHO05D004231 1.3e-28 130.2 135 60.0
GSVIVG01016104001 Vitis vinifera HOM05D003677 ORTHO05D004231 2.2e-28 129.4 111 68.5
BcaC05g29937 Brassica carinata HOM05D003677 ORTHO05D004231 3.7e-28 128.6 135 60.0
C05p62750 Brassica napus HOM05D003677 ORTHO05D004231 3.7e-28 128.6 135 60.0
BolC5t34928H Brassica oleracea HOM05D003677 ORTHO05D004231 3.7e-28 128.6 135 60.0
CDE07G1504 Ceratophyllum demersum HOM05D003677 ORTHO05D004231 3.7e-28 128.6 111 69.4
MBI07_g16912_MAGBIO Magnolia biondii HOM05D003677 ORTHO05D004231 3.7e-28 128.6 153 56.2
Peaxi162Scf00152g00828 Petunia axillaris HOM05D003677 ORTHO05D004231 3.7e-28 128.6 148 58.1
GSVIVG01023509001 Vitis vinifera HOM05D003677 ORTHO05D004231 3.7e-28 128.6 68 95.6
ATR0736G218 Amborella trichopoda HOM05D003677 ORTHO05D004231 1.4e-27 126.7 88 79.5
Phvul.008G151836 Phaseolus vulgaris HOM05D003677 ORTHO05D004231 1.4e-27 126.7 136 58.1
VMungo0720G1875 Vigna mungo HOM05D003677 ORTHO05D004231 1.8e-27 126.3 136 58.1
Gohir.D13G172900 Gossypium hirsutum HOM05D003677 ORTHO05D004231 2.4e-27 125.9 82 81.7
arahy.Tifrunner.gnm1.ann1.U10W7S Arachis hypogaea HOM05D003677 ORTHO05D004231 3.1e-27 125.6 134 61.2
AL3G14510 Arabidopsis lyrata HOM05D003677 ORTHO05D004231 4.1e-27 125.2 131 58.8
Ca_10015_v3 Cicer arietinum L. HOM05D003677 ORTHO05D004231 5.3e-27 124.8 133 58.6
Lj5g0022615 Lotus japonicus HOM05D003677 ORTHO05D004231 7.0e-27 124.4 130 60.8
arahy.Tifrunner.gnm1.ann1.5GL5JK Arachis hypogaea HOM05D003677 ORTHO05D004231 1.2e-26 123.6 134 61.2
AagrBONN_evm.TU.Sc2ySwM_228.2901 Anthoceros agrestis HOM05D003677 ORTHO05D004231 1.6e-26 123.2 150 56.7
AT3G04500 Arabidopsis thaliana HOM05D003677 ORTHO05D004231 1.6e-26 123.2 137 60.6
FvH4_6g01880 Fragaria vesca HOM05D003677 ORTHO05D004231 2.0e-26 122.9 131 58.0
FAN14G1798 Fragaria x ananassa HOM05D003677 ORTHO05D004231 2.0e-26 122.9 131 58.0
FAN14G5891 Fragaria x ananassa HOM05D003677 ORTHO05D004231 2.0e-26 122.9 131 58.0
Sp3g03350 Schrenkiella parvula HOM05D003677 ORTHO05D004231 2.0e-26 122.9 135 57.8
SEGI_18661 Sequoiadendron giganteum HOM05D003677 ORTHO05D004231 2.7e-26 122.5 185 49.2
THA.LOC104805782 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 2.7e-26 122.5 138 58.7
Prupe.6G350000 Prunus persica HOM05D003677 ORTHO05D004231 3.5e-26 122.1 69 92.8
HanXRQChr04g0108621 Helianthus annuus HOM05D003677 ORTHO05D004231 4.5e-26 121.7 95 74.7
Peaxi162Scf00015g00308 Petunia axillaris HOM05D003677 ORTHO05D004231 4.5e-26 121.7 122 60.7
Zm00001eb185100 Zea mays HOM05D003677 ORTHO05D004231 4.5e-26 121.7 124 58.9
HPP92_002516 Vanilla planifolia HOM05D003677 ORTHO05D004231 1.3e-25 120.2 97 70.1
HPP92_002535 Vanilla planifolia HOM05D003677 ORTHO05D004231 1.3e-25 120.2 97 70.1
Pp3c23_14650 Physcomitrium patens HOM05D003677 ORTHO05D004231 1.7e-25 119.8 171 50.9
TPR.G22331 Trifolium pratense HOM05D003677 ORTHO05D004231 3.8e-25 118.6 130 56.2
A05p42980 Brassica napus HOM05D003677 ORTHO05D004231 6.5e-25 117.9 123 60.2
BraA05t23042Z Brassica rapa HOM05D003677 ORTHO05D004231 1.1e-24 117.1 144 56.2
Lalb_Chr02g0149101 Lupinus albus HOM05D003677 ORTHO05D004231 1.1e-24 117.1 132 56.1
HanXRQChr13g0397681 Helianthus annuus HOM05D003677 ORTHO05D004231 1.5e-24 116.7 117 62.4
Nitab4.5_0003780g0100 Nicotiana tabacum HOM05D003677 ORTHO05D004231 2.5e-24 115.9 134 57.5
Sopen05g033470 Solanum pennellii HOM05D003677 ORTHO05D004231 4.2e-24 115.2 125 60.0
Glyma.11G011000 Glycine max HOM05D003677 ORTHO05D004231 5.5e-24 114.8 138 55.8
FAN05G1443 Fragaria x ananassa HOM05D003677 ORTHO05D004231 9.4e-24 114.0 133 56.4
Mapoly0213s0004 Marchantia polymorpha HOM05D003677 ORTHO05D004231 9.4e-24 114.0 169 47.3
Migut.I00391 Erythranthe guttata HOM05D003677 ORTHO05D004231 1.2e-23 113.6 84 71.4
CARHR078690 Cardamine hirsuta HOM05D003677 ORTHO05D004231 2.7e-23 112.5 100 68.0
Os02g0622500 Oryza sativa ssp. japonica HOM05D003677 ORTHO05D004231 2.7e-23 112.5 132 53.0
Lj4g0016038 Lotus japonicus HOM05D003677 ORTHO05D004231 6.1e-23 111.3 118 61.9
ClCG06G009560 Citrullus lanatus HOM05D003677 ORTHO05D004231 8.0e-23 110.9 125 57.6
Solyc05g055010.4 Solanum lycopersicum HOM05D003677 ORTHO05D004231 8.0e-23 110.9 125 58.4
Carub.0003s0366 Capsella rubella HOM05D003677 ORTHO05D004231 1.4e-22 110.2 140 54.3
Thhalv10021407m.g Eutrema salsugineum HOM05D003677 ORTHO05D004231 1.4e-22 110.2 135 54.1
DCAR_024364 Daucus carota HOM05D003677 ORTHO05D004231 1.8e-22 109.8 68 86.8
BcaC01g04372 Brassica carinata HOM05D003677 ORTHO05D004231 2.3e-22 109.4 60 91.7
AUR62040925 Chenopodium quinoa HOM05D003677 ORTHO05D004231 6.8e-22 107.8 59 89.8
Lalb_Chr16g0386451 Lupinus albus HOM05D003677 ORTHO05D004231 8.8e-22 107.5 121 55.4
CAN.G1465.9 Capsicum annuum HOM05D003677 ORTHO05D004231 4.4e-21 105.1 126 51.6
Lalb_Chr09g0329801 Lupinus albus HOM05D003677 ORTHO05D004231 2.4e-19 99.4 64 78.1
BcaC05g30193 Brassica carinata HOM05D003677 ORTHO05D004231 4.1e-19 98.6 135 51.1
C03p40840 Brassica napus HOM05D003677 ORTHO05D004231 5.4e-19 98.2 55 90.9
arahy.Tifrunner.gnm1.ann1.64W5EF Arachis hypogaea HOM05D003677 ORTHO05D004231 2.3e-17 92.8 130 46.9
SMO367G0071 Selaginella moellendorffii HOM05D003677 ORTHO05D004231 6.5e-17 91.3 60 76.7
Zm00001eb108490 Zea mays HOM05D003677 ORTHO05D004231 6.5e-17 91.3 124 51.6
Os08g0567200 Oryza sativa ssp. japonica HOM05D003677 ORTHO05D004231 1.1e-16 90.5 123 48.8
Zm00001eb326740 Zea mays HOM05D003677 ORTHO05D004231 2.1e-15 86.3 121 49.6
BolC3t16355H Brassica oleracea HOM05D003677 ORTHO05D004231 1.8e-14 83.2 45 91.1
CBR_g52330 Chara braunii HOM05D003677 ORTHO05D004231 8.9e-14 80.9 126 47.6
Aqoxy2G03669 Aquilegia oxysepala HOM05D003677 ORTHO05D004231 3.4e-13 79.0 110 50.9
Dinv36116 Davidia involucrata HOM05D003677 ORTHO05D004231 1.4e-11 73.6 118 50.0
BcaC01g03318 Brassica carinata HOM05D003677 ORTHO05D004231 3.3e-08 62.4 37 75.7
A03p33640 Brassica napus HOM05D003677 ORTHO05D004231 4.3e-08 62.0 47 70.2
BraA03t12539Z Brassica rapa HOM05D003677 ORTHO05D004231 4.3e-08 62.0 47 70.2
arahy.Tifrunner.gnm1.ann1.UY3EWL Arachis hypogaea HOM05D003677 ORTHO05D004231 7.3e-08 61.2 40 62.5
Nitab4.5_0006737g0100 Nicotiana tabacum HOM05D003677 ORTHO05D004231 7.3e-08 61.2 37 83.8


User provided reference genes

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