Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu039084.1 Olea europaea HOM05D001065 ORTHO05D035018 4.4e-50 201.1 107 100.0
SalBow6G3244 Salvia bowleyana HOM05D001065 ORTHO05D003103 6.7e-22 107.5 92 65.2
Oeu049866.1 Olea europaea HOM05D001065 ORTHO05D035018 1.3e-20 103.2 79 74.7
MSTRG.24517 Avicennia marina HOM05D001065 ORTHO05D003103 1.2e-18 96.7 93 61.3
Migut.N02988 Erythranthe guttata HOM05D001065 ORTHO05D003103 4.5e-18 94.7 84 65.5
Dinv13759 Davidia involucrata HOM05D001065 ORTHO05D003103 2.4e-16 89.0 86 61.6
Cc10_g00250 Coffea canephora HOM05D001065 ORTHO05D003103 4.6e-15 84.7 89 51.7
SGA_v2.0_scaffold220G42645 Striga asiatica HOM05D001065 ORTHO05D003103 2.5e-13 79.0 103 49.5
CiPaw.07G133400 Carya illinoinensis HOM05D001065 ORTHO05D003103 3.7e-12 75.1 85 50.6
TAR376G1201 Trochodendron aralioides HOM05D001065 ORTHO05D003103 3.7e-12 75.1 85 51.8
PGR083G0789 Punica granatum HOM05D001065 ORTHO05D003103 4.8e-12 74.7 99 47.5
CSS0037280 Camellia sinensis var. sinensis HOM05D001065 ORTHO05D003103 6.2e-12 74.3 85 52.9
Hma1.2p1_0489F.1_g164120 Hydrangea macrophylla HOM05D001065 ORTHO05D003103 8.2e-12 73.9 96 52.1
Thecc.08G099700 Theobroma cacao HOM05D001065 ORTHO05D003103 1.4e-11 73.2 79 53.2
Nitab4.5_0001756g0010 Nicotiana tabacum HOM05D001065 ORTHO05D003103 1.8e-11 72.8 77 49.4
Lsat_1_v5_gn_9_48340 Lactuca sativa HOM05D001065 ORTHO05D003103 2.4e-11 72.4 108 46.3
Lj4A811T124 Lonicera japonica HOM05D001065 ORTHO05D003103 6.9e-11 70.9 74 55.4
TWI36G1461 Tripterygium wilfordii HOM05D001065 ORTHO05D003103 6.9e-11 70.9 79 53.2
Actinidia17078 Actinidia chinensis HOM05D001065 ORTHO05D003103 1.2e-10 70.1 87 49.4
Duzib041G0437 Durio zibethinus HOM05D001065 ORTHO05D003103 1.2e-10 70.1 84 50.0
COL.COLO4_12297 Corchorus olitorius HOM05D001065 ORTHO05D003103 1.5e-10 69.7 88 46.6
DCAR_023023 Daucus carota HOM05D001065 ORTHO05D035018 1.5e-10 69.7 69 52.2
unitig_578.g16240 Utricularia gibba HOM05D001065 ORTHO05D003103 1.5e-10 69.7 94 47.9
GSVIVG01013428001 Vitis vinifera HOM05D001065 ORTHO05D003103 1.5e-10 69.7 82 52.4
Haze_22864 Corylus avellana HOM05D001065 ORTHO05D003103 5.8e-10 67.8 85 45.9
ECA232G0657 Erigeron canadensis HOM05D001065 ORTHO05D003103 5.8e-10 67.8 108 44.4
QL02p015747 Quercus lobata HOM05D001065 ORTHO05D003103 1.0e-09 67.0 86 47.7
Prupe.5G005400 Prunus persica HOM05D001065 ORTHO05D003103 1.3e-09 66.6 79 50.6
vmacro21766 Vaccinium macrocarpon HOM05D001065 ORTHO05D003103 1.3e-09 66.6 80 50.0
CANSAT78G2419 Cannabis sativa HOM05D001065 ORTHO05D003103 1.7e-09 66.2 79 48.1
Cfa014139 Carpinus fangiana HOM05D001065 ORTHO05D000513 2.2e-09 65.9 89 44.9
CAN.G1330.12 Capsicum annuum HOM05D001065 ORTHO05D003103 3.8e-09 65.1 86 47.7
Eucgr.F01821 Eucalyptus grandis HOM05D001065 ORTHO05D003103 6.5e-09 64.3 89 42.7
Sabra02G0003200 Salix brachista HOM05D001065 ORTHO05D003103 6.5e-09 64.3 89 44.9
Gohir.D05G180900 Gossypium hirsutum HOM05D001065 ORTHO05D003103 8.4e-09 63.9 88 44.3
HanXRQChr09g0241911 Helianthus annuus HOM05D001065 ORTHO05D003103 8.4e-09 63.9 107 42.1
Manes.18G001900 Manihot esculenta HOM05D001065 ORTHO05D003103 8.4e-09 63.9 88 48.9
Rhsim06G0003100 Rhododendron simsii HOM05D001065 ORTHO05D003103 8.4e-09 63.9 75 50.7
Peaxi162Scf00385g00010 Petunia axillaris HOM05D001065 ORTHO05D003103 1.1e-08 63.5 87 44.8
Atru.chr13.59 Acer truncatum HOM05D001065 ORTHO05D003103 1.4e-08 63.2 86 46.5
Sopen04g036400 Solanum pennellii HOM05D001065 ORTHO05D003103 1.4e-08 63.2 69 47.8
Gorai.009G185900 Gossypium raimondii HOM05D001065 ORTHO05D003103 1.9e-08 62.8 88 43.2
Ciclev10001069m.g Citrus clementina HOM05D001065 ORTHO05D003103 2.5e-08 62.4 86 47.7
Duzib116G0376 Durio zibethinus HOM05D001065 ORTHO05D003103 2.5e-08 62.4 86 44.2
Gohir.A05G177500 Gossypium hirsutum HOM05D001065 ORTHO05D003103 3.2e-08 62.0 88 44.3
Nn6g31623 Nelumbo nucifera HOM05D001065 ORTHO05D003103 3.2e-08 62.0 90 41.1
PGSC0003DMG400009998 Solanum tuberosum HOM05D001065 ORTHO05D003103 3.2e-08 62.0 69 47.8
Ca_15384_v3 Cicer arietinum L. HOM05D001065 ORTHO05D003103 4.2e-08 61.6 74 44.6
Aqoxy7G04038 Aquilegia oxysepala HOM05D001065 ORTHO05D003103 5.5e-08 61.2 89 43.8
RcHm_v2.0_Chr5g0003401 Rosa chinensis HOM05D001065 ORTHO05D003103 7.1e-08 60.8 76 48.7
Solyc04g082760.3 Solanum lycopersicum HOM05D001065 ORTHO05D003103 7.1e-08 60.8 73 45.2
Potri.002G004800 Populus trichocarpa HOM05D001065 ORTHO05D003103 1.2e-07 60.1 79 48.1
FAN21G0065 Fragaria x ananassa HOM05D001065 ORTHO05D003103 2.1e-07 59.3 79 46.8
FAN21G0171 Fragaria x ananassa HOM05D001065 ORTHO05D003103 2.1e-07 59.3 79 46.8
FvH4_3g02280 Fragaria vesca HOM05D001065 ORTHO05D003103 2.7e-07 58.9 79 45.6
Lj1g0025049 Lotus japonicus HOM05D001065 ORTHO05D003103 2.7e-07 58.9 93 40.9
Glyma.06G014400 Glycine max HOM05D001065 ORTHO05D003103 3.5e-07 58.5 88 39.8
Lalb_Chr11g0061371 Lupinus albus HOM05D001065 ORTHO05D003103 6.0e-07 57.8 69 46.4
Medtr3g116120 Medicago truncatula HOM05D001065 ORTHO05D003103 7.9e-07 57.4 75 44.0
Medtr6g053260 Medicago truncatula HOM05D000007 ORTHO05D003103 1.0e-06 57.0 74 41.9
Glyma.04G014400 Glycine max HOM05D001065 ORTHO05D003103 2.3e-06 55.8 88 37.5
Thhalv10016607m.g Eutrema salsugineum HOM05D001065 ORTHO05D003103 3.0e-06 55.5 68 45.6
TPR.G38238 Trifolium pratense HOM05D001065 ORTHO05D003103 6.7e-06 54.3 75 44.0
AL4G29280 Arabidopsis lyrata HOM05D001065 ORTHO05D003103 8.7e-06 53.9 104 37.5


User provided reference genes

Program Settings