Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu038773.1 Olea europaea HOM05D006035 ORTHO05D007155 9.9e-48 193.4 115 100.0
Oeu038774.1 Olea europaea HOM05D006035 ORTHO05D007155 9.9e-48 193.4 115 100.0
Oeu038777.1 Olea europaea HOM05D006035 ORTHO05D007155 3.5e-37 158.3 157 58.0
Oeu038775.1 Olea europaea HOM05D006035 ORTHO05D007155 1.8e-36 156.0 157 57.3
MSTRG.10157 Avicennia marina HOM05D006035 ORTHO05D007155 1.1e-22 110.2 153 45.1
SGA_v2.0_scaffold64G22102 Striga asiatica HOM05D006035 ORTHO05D007155 4.2e-22 108.2 160 42.5
Migut.G00072 Erythranthe guttata HOM05D006035 ORTHO05D007155 2.7e-21 105.5 160 40.6
Dinv44276 Davidia involucrata HOM05D006035 ORTHO05D007155 9.7e-19 97.1 135 42.2
Actinidia31554 Actinidia chinensis HOM05D006035 ORTHO05D007155 1.6e-18 96.3 156 39.1
Rhsim04G0240200 Rhododendron simsii HOM05D006035 ORTHO05D007155 1.6e-18 96.3 158 39.9
vmacro15178 Vaccinium macrocarpon HOM05D006035 ORTHO05D007155 1.6e-18 96.3 150 40.0
SalBow8G4845 Salvia bowleyana HOM05D006035 ORTHO05D007155 2.2e-18 95.9 158 39.9
unitig_32.g11850 Utricularia gibba HOM05D006035 ORTHO05D007155 3.7e-18 95.1 157 40.8
Oeu042670.1 Olea europaea HOM05D006035 ORTHO05D007155 4.8e-18 94.7 159 41.5
Sopen01g024580 Solanum pennellii HOM05D006035 ORTHO05D007155 4.8e-18 94.7 160 35.6
Duzib212G0974 Durio zibethinus HOM05D006035 ORTHO05D007155 6.3e-18 94.4 159 38.4
Rhsim02G0003100 Rhododendron simsii HOM05D006035 ORTHO05D007155 8.2e-18 94.0 148 41.9
CsaV3_3G015240 Cucumis sativus L. HOM05D006035 ORTHO05D007155 1.4e-17 93.2 150 38.0
QL06p012626 Quercus lobata HOM05D006035 ORTHO05D007155 2.4e-17 92.4 157 37.6
Atru.chr4.3040 Acer truncatum HOM05D006035 ORTHO05D007155 3.1e-17 92.0 162 37.7
Cc03_g00700 Coffea canephora HOM05D006035 ORTHO05D007155 3.1e-17 92.0 176 35.2
COL.COLO4_34598 Corchorus olitorius HOM05D006035 ORTHO05D007155 3.1e-17 92.0 159 38.4
CSS0047932 Camellia sinensis var. sinensis HOM05D006035 ORTHO05D007155 4.1e-17 91.7 165 37.0
MD13G1151300 Malus domestica HOM05D006035 ORTHO05D007155 4.1e-17 91.7 155 40.6
PGSC0003DMG400001204 Solanum tuberosum HOM05D006035 ORTHO05D007155 4.1e-17 91.7 160 35.6
Thecc.04G302600 Theobroma cacao HOM05D006035 ORTHO05D007155 4.1e-17 91.7 163 36.8
CSS0012943 Camellia sinensis var. sinensis HOM05D006035 ORTHO05D007155 1.2e-16 90.1 165 36.4
Nitab4.5_0000931g0030 Nicotiana tabacum HOM05D006035 ORTHO05D007155 1.2e-16 90.1 167 36.5
CAN.G97.9 Capsicum annuum HOM05D006035 ORTHO05D007155 2.0e-16 89.4 165 35.8
MELO3C006721.2 Cucumis melo HOM05D006035 ORTHO05D007155 2.0e-16 89.4 150 38.0
CSS0034436 Camellia sinensis var. sinensis HOM05D006035 ORTHO05D007155 3.4e-16 88.6 159 38.4
Glyma.07G238700 Glycine max HOM05D006035 ORTHO05D007155 3.4e-16 88.6 151 37.7
CiPaw.01G137000 Carya illinoinensis HOM05D006035 ORTHO05D007155 5.9e-16 87.8 160 37.5
vmacro08029 Vaccinium macrocarpon HOM05D006035 ORTHO05D007155 7.7e-16 87.4 156 37.8
Lsat_1_v5_gn_1_41620 Lactuca sativa HOM05D006035 ORTHO05D007155 1.0e-15 87.0 152 38.2
Cfa015301 Carpinus fangiana HOM05D006035 ORTHO05D007155 1.3e-15 86.7 159 35.8
Duzib052G0321 Durio zibethinus HOM05D006035 ORTHO05D007155 1.3e-15 86.7 158 38.0
Sabra08G0078500 Salix brachista HOM05D006035 ORTHO05D007155 1.3e-15 86.7 166 35.5
TAR633G1133 Trochodendron aralioides HOM05D006035 ORTHO05D007155 1.3e-15 86.7 151 37.7
ClCG05G006630 Citrullus lanatus HOM05D006035 ORTHO05D007155 1.7e-15 86.3 149 36.9
MD16G1152300 Malus domestica HOM05D006035 ORTHO05D007155 1.7e-15 86.3 155 38.7
Duzib151G0686 Durio zibethinus HOM05D006035 ORTHO05D007155 2.2e-15 85.9 155 37.4
Haze_01313 Corylus avellana HOM05D006035 ORTHO05D007155 2.9e-15 85.5 158 35.4
RcHm_v2.0_Chr4g0425671 Rosa chinensis HOM05D006035 ORTHO05D007155 2.9e-15 85.5 156 36.5
Sed0018605 Sechium edule HOM05D006035 ORTHO05D007155 2.9e-15 85.5 149 38.3
Gohir.A10G173200 Gossypium hirsutum HOM05D006035 ORTHO05D007155 5.0e-15 84.7 159 35.8
CSS0043064 Camellia sinensis var. sinensis HOM05D006035 ORTHO05D007155 6.5e-15 84.3 160 35.0
VMungo1215G2980 Vigna mungo HOM05D006035 ORTHO05D007155 6.5e-15 84.3 156 35.9
Ciclev10006076m.g Citrus clementina HOM05D006035 ORTHO05D007155 8.5e-15 84.0 161 35.4
Phvul.005G129600 Phaseolus vulgaris HOM05D006035 ORTHO05D007155 8.5e-15 84.0 156 35.3
ECA246G4755 Erigeron canadensis HOM05D006035 ORTHO05D007155 1.1e-14 83.6 147 36.1
Gohir.D09G234900 Gossypium hirsutum HOM05D006035 ORTHO05D007155 1.1e-14 83.6 160 37.5
Sabra10G0113300 Salix brachista HOM05D006035 ORTHO05D007155 1.1e-14 83.6 166 34.9
Glyma.17G034900 Glycine max HOM05D006035 ORTHO05D007155 1.4e-14 83.2 152 37.5
Gorai.006G257800 Gossypium raimondii HOM05D006035 ORTHO05D007155 1.4e-14 83.2 160 37.5
Gorai.011G201000 Gossypium raimondii HOM05D006035 ORTHO05D007155 1.4e-14 83.2 159 36.5
TAR362G0119 Trochodendron aralioides HOM05D006035 ORTHO05D007155 1.9e-14 82.8 152 48.7
Nitab4.5_0000655g0030 Nicotiana tabacum HOM05D006035 ORTHO05D007155 2.5e-14 82.4 159 35.8
Psat0s4013g0040 Pisum sativum HOM05D006035 ORTHO05D007155 3.2e-14 82.0 155 35.5
Hma1.2p1_0013F.1_g008420 Hydrangea macrophylla HOM05D006035 ORTHO05D007155 4.2e-14 81.6 166 36.7
Gohir.D10G179700 Gossypium hirsutum HOM05D006035 ORTHO05D007155 5.5e-14 81.3 159 35.2
TPR.G25406 Trifolium pratense HOM05D006035 ORTHO05D007155 5.5e-14 81.3 154 33.8
AT5G49480 Arabidopsis thaliana HOM05D006035 ORTHO05D007155 9.4e-14 80.5 157 33.1
Ca_21435_v3 Cicer arietinum L. HOM05D006035 ORTHO05D007155 9.4e-14 80.5 157 33.1
THA.LOC104818878 Tarenaya hassleriana HOM05D006035 ORTHO05D007155 9.4e-14 80.5 160 34.4
Nn3g21749 Nelumbo nucifera HOM05D006035 ORTHO05D007155 1.2e-13 80.1 160 36.2
Gohir.A09G234100 Gossypium hirsutum HOM05D006035 ORTHO05D007155 1.6e-13 79.7 160 36.2
HanXRQChr11g0353881 Helianthus annuus HOM05D006035 ORTHO05D007155 1.6e-13 79.7 148 34.5
PSO761G0247 Papaver somniferum HOM05D006035 ORTHO05D007155 1.6e-13 79.7 161 32.9
FAN07G1803 Fragaria x ananassa HOM05D006035 ORTHO05D007155 2.1e-13 79.3 154 35.7
Potri.008G103900 Populus trichocarpa HOM05D006035 ORTHO05D007155 2.7e-13 79.0 166 34.3
DCAR_030462 Daucus carota HOM05D006035 ORTHO05D007155 3.6e-13 78.6 159 35.2
Lalb_Chr13g0298531 Lupinus albus HOM05D006035 ORTHO05D007155 3.6e-13 78.6 156 34.6
FvH4_4g19970 Fragaria vesca HOM05D006035 ORTHO05D007155 4.6e-13 78.2 150 35.3
Lj1g0017970 Lotus japonicus HOM05D006035 ORTHO05D007155 4.6e-13 78.2 159 34.6
TWI09G1568 Tripterygium wilfordii HOM05D006035 ORTHO05D007155 4.6e-13 78.2 155 34.8
BraA09t36121Z Brassica rapa HOM05D006035 ORTHO05D007155 6.1e-13 77.8 158 33.5
Medtr4g122260 Medicago truncatula HOM05D006035 ORTHO05D007155 6.1e-13 77.8 157 33.1
BcaC04g23738 Brassica carinata HOM05D006035 ORTHO05D007155 7.9e-13 77.4 158 32.3
C09p05220 Brassica napus HOM05D006035 ORTHO05D007155 7.9e-13 77.4 158 32.3
CANSAT78G2193 Cannabis sativa HOM05D006035 ORTHO05D007155 7.9e-13 77.4 160 34.4
PGR004G1138 Punica granatum HOM05D006035 ORTHO05D007155 7.9e-13 77.4 164 32.3
BolC9t53448H Brassica oleracea HOM05D006035 ORTHO05D007155 1.0e-12 77.0 158 32.3
PGR031G3428 Punica granatum HOM05D006035 ORTHO05D007155 1.0e-12 77.0 164 34.8
A09p04840 Brassica napus HOM05D006035 ORTHO05D007155 1.4e-12 76.6 158 32.3
Potri.010G146900 Populus trichocarpa HOM05D006035 ORTHO05D007155 1.4e-12 76.6 166 33.7
AL8G23240 Arabidopsis lyrata HOM05D006035 ORTHO05D007155 2.3e-12 75.9 158 32.3
PSO210G7669 Papaver somniferum HOM05D006035 ORTHO05D007155 3.0e-12 75.5 161 31.7
Manes.15G000900 Manihot esculenta HOM05D006035 ORTHO05D007155 3.9e-12 75.1 156 41.7
Phvul.003G115800 Phaseolus vulgaris HOM05D006035 ORTHO05D007155 5.1e-12 74.7 156 33.3
Aa31LG11G8120 Aethionema arabicum HOM05D006035 ORTHO05D007155 6.7e-12 74.3 160 31.9
Aqoxy2G02699 Aquilegia oxysepala HOM05D006035 ORTHO05D007155 6.7e-12 74.3 156 34.0
BcaB04g19614 Brassica carinata HOM05D006035 ORTHO05D007155 6.7e-12 74.3 158 31.6
Sp2g19800 Schrenkiella parvula HOM05D006035 ORTHO05D007155 6.7e-12 74.3 165 30.9
SpUn0021_0050 Schrenkiella parvula HOM05D006035 ORTHO05D007155 6.7e-12 74.3 165 30.9
Lj6P692T31 Lonicera japonica HOM05D006035 ORTHO05D007155 8.8e-12 73.9 95 40.0
CARHR182020 Cardamine hirsuta HOM05D006035 ORTHO05D007155 1.1e-11 73.6 155 33.5
CSS0018156 Camellia sinensis var. sinensis HOM05D006035 ORTHO05D007155 1.5e-11 73.2 156 39.7
HPP92_008930 Vanilla planifolia HOM05D006035 ORTHO05D007155 1.5e-11 73.2 152 33.6
Lalb_Chr07g0182041 Lupinus albus HOM05D006035 ORTHO05D007155 2.0e-11 72.8 155 34.8
TWI53G1140 Tripterygium wilfordii HOM05D006035 ORTHO05D007155 2.0e-11 72.8 153 33.3
HanXRQChr05g0146001 Helianthus annuus HOM05D006035 ORTHO05D007155 4.3e-11 71.6 151 33.1
EL10Ac3g05523 Beta vulgaris HOM05D006035 ORTHO05D007155 9.7e-11 70.5 162 30.9
Solyc01g058720.4 Solanum lycopersicum HOM05D006035 ORTHO05D007155 1.3e-10 70.1 142 32.4
Lsat_1_v5_gn_6_116540 Lactuca sativa HOM05D006035 ORTHO05D007155 1.7e-10 69.7 150 32.7
Eucgr.H04056 Eucalyptus grandis HOM05D006035 ORTHO05D007155 2.8e-10 68.9 191 29.3
Cpa.g.sc9.45 Carica papaya HOM05D006035 ORTHO05D007155 8.2e-10 67.4 155 42.6
Peaxi162Scf00228g00041 Petunia axillaris HOM05D006035 ORTHO05D007155 8.2e-10 67.4 132 37.1
MD04G1036600 Malus domestica HOM05D006035 ORTHO05D007155 1.8e-09 66.2 91 38.5
Lsat_1_v5_gn_6_116560 Lactuca sativa HOM05D006035 ORTHO05D007155 4.5e-08 61.6 148 30.4
Manes.03G205900 Manihot esculenta HOM05D006035 ORTHO05D007155 5.9e-08 61.2 138 28.3
Prupe.1G115600 Prunus persica HOM05D006035 ORTHO05D007155 7.7e-08 60.8 147 45.6
GSVIVG01034916001 Vitis vinifera HOM05D006035 ORTHO05D007155 1.7e-07 59.7 62 43.5
Ciclev10006337m.g Citrus clementina HOM05D006035 ORTHO05D007155 2.2e-07 59.3 96 34.4
Sc19g0003080 Simmondsia chinensis HOM05D006035 ORTHO05D007155 3.8e-07 58.5 163 29.4
Carub.0008s0934 Capsella rubella HOM05D006035 ORTHO05D007155 5.0e-07 58.2 163 40.5
Ah.13g071330 Amaranthus hybridus HOM05D006035 ORTHO05D007155 1.9e-06 56.2 179 27.4
AUR62039264 Chenopodium quinoa HOM05D006035 ORTHO05D007155 3.2e-06 55.5 163 27.6
QL06p006093 Quercus lobata HOM05D001729 ORTHO05D001155 3.2e-06 55.5 45 60.0


User provided reference genes

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