Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu038441.1 Olea europaea HOM05D006821 ORTHO05D008740 2.3e-174 615.5 329 100.0
Actinidia18357 Actinidia chinensis HOM05D006821 ORTHO05D008740 4.4e-109 398.7 331 64.4
Migut.N01911 Erythranthe guttata HOM05D006821 ORTHO05D008740 4.6e-106 388.7 325 62.8
CSS0006427 Camellia sinensis var. sinensis HOM05D006821 ORTHO05D008740 6.2e-103 378.3 327 60.9
Nitab4.5_0012228g0010 Nicotiana tabacum HOM05D006821 ORTHO05D008740 6.2e-103 378.3 326 62.6
Duzib177G0830 Durio zibethinus HOM05D006821 ORTHO05D008740 1.1e-102 377.5 326 61.7
Hma1.2p1_0195F.1_g084560 Hydrangea macrophylla HOM05D006821 ORTHO05D008740 1.8e-102 376.7 329 62.6
TAR633G1083 Trochodendron aralioides HOM05D006821 ORTHO05D008740 3.1e-102 375.9 326 61.3
Peaxi162Scf00282g00328 Petunia axillaris HOM05D006821 ORTHO05D008740 6.9e-102 374.8 331 61.6
Ciclev10001807m.g Citrus clementina HOM05D006821 ORTHO05D008740 3.8e-100 369.0 329 59.0
Cc02_g30600 Coffea canephora HOM05D006821 ORTHO05D008740 3.8e-100 369.0 327 59.9
Prupe.6G342700 Prunus persica HOM05D006821 ORTHO05D008740 8.4e-100 367.9 326 60.4
PGSC0003DMG400019432 Solanum tuberosum HOM05D006821 ORTHO05D008740 4.2e-99 365.5 327 60.9
SalBow4G1195 Salvia bowleyana HOM05D006821 ORTHO05D008740 5.4e-99 365.2 326 59.2
SalBow4G2420 Salvia bowleyana HOM05D006821 ORTHO05D008740 5.4e-99 365.2 326 59.2
RcHm_v2.0_Chr3g0451171 Rosa chinensis HOM05D006821 ORTHO05D008740 9.3e-99 364.4 326 59.5
TAR362G0286 Trochodendron aralioides HOM05D006821 ORTHO05D008740 1.2e-98 364.0 326 60.1
FAN09G4578 Fragaria x ananassa HOM05D006821 ORTHO05D008740 1.6e-98 363.6 327 59.9
Nitab4.5_0001592g0080 Nicotiana tabacum HOM05D006821 ORTHO05D008740 1.6e-98 363.6 348 58.6
Duzib128G0425 Durio zibethinus HOM05D006821 ORTHO05D008740 2.1e-98 363.2 329 58.7
FAN05G4221 Fragaria x ananassa HOM05D006821 ORTHO05D008740 2.1e-98 363.2 327 59.6
FAN02G2705 Fragaria x ananassa HOM05D006821 ORTHO05D008740 2.7e-98 362.8 327 59.6
FvH4_6g02990 Fragaria vesca HOM05D006821 ORTHO05D008740 3.5e-98 362.5 327 59.3
Atru.chr2.810 Acer truncatum HOM05D006821 ORTHO05D008740 6.0e-98 361.7 329 57.4
FAN05G1836 Fragaria x ananassa HOM05D006821 ORTHO05D008740 6.0e-98 361.7 327 59.6
Manes.09G153500 Manihot esculenta HOM05D006821 ORTHO05D008740 7.9e-98 361.3 326 60.1
Solyc01g097350.4 Solanum lycopersicum HOM05D006821 ORTHO05D008740 1.3e-97 360.5 330 60.0
MD04G1224000 Malus domestica HOM05D006821 ORTHO05D008740 2.3e-97 359.8 326 58.3
Sopen01g041020 Solanum pennellii HOM05D006821 ORTHO05D008740 2.3e-97 359.8 330 59.4
Thecc.05G283900 Theobroma cacao HOM05D006821 ORTHO05D008740 3.0e-97 359.4 329 58.1
FAN14G2672 Fragaria x ananassa HOM05D006821 ORTHO05D008740 5.1e-97 358.6 327 59.0
CAN.G134.100 Capsicum annuum HOM05D006821 ORTHO05D008740 6.7e-97 358.2 327 59.9
Dinv10030 Davidia involucrata HOM05D006821 ORTHO05D008740 1.9e-96 356.7 333 60.7
MD12G1240800 Malus domestica HOM05D006821 ORTHO05D008740 9.6e-96 354.4 326 57.4
Gohir.D13G107900 Gossypium hirsutum HOM05D006821 ORTHO05D008740 1.6e-95 353.6 336 56.2
Gorai.013G120900 Gossypium raimondii HOM05D006821 ORTHO05D008740 2.1e-95 353.2 336 56.0
TWI56G0757 Tripterygium wilfordii HOM05D006821 ORTHO05D008740 2.1e-95 353.2 323 59.4
Manes.08G134300 Manihot esculenta HOM05D006821 ORTHO05D008740 3.7e-95 352.4 326 57.7
Gohir.A13G104500 Gossypium hirsutum HOM05D006821 ORTHO05D008740 4.8e-95 352.1 336 56.0
GSVIVG01021794001 Vitis vinifera HOM05D006821 ORTHO05D008740 4.8e-95 352.1 322 59.6
Glyma.03G246900 Glycine max HOM05D006821 ORTHO05D008740 6.2e-95 351.7 328 57.3
Glyma.19G244500 Glycine max HOM05D006821 ORTHO05D008740 1.1e-94 350.9 330 56.7
Haze_04355 Corylus avellana HOM05D006821 ORTHO05D008740 1.8e-94 350.1 331 58.0
COL.COLO4_15343 Corchorus olitorius HOM05D006821 ORTHO05D008740 2.4e-94 349.7 326 57.7
Potri.005G052900 Populus trichocarpa HOM05D006821 ORTHO05D008740 3.1e-94 349.4 329 58.4
CiPaw.07G067000 Carya illinoinensis HOM05D006821 ORTHO05D008740 5.3e-94 348.6 329 56.5
Cfa006429 Carpinus fangiana HOM05D006821 ORTHO05D008740 1.5e-93 347.1 327 56.3
CANSAT54G2350 Cannabis sativa HOM05D006821 ORTHO05D008740 4.5e-93 345.5 326 55.5
Aqoxy2G03492 Aquilegia oxysepala HOM05D006821 ORTHO05D008740 6.4e-92 341.7 326 57.4
AUR62001014 Chenopodium quinoa HOM05D006821 ORTHO05D008740 1.4e-91 340.5 330 54.8
Sc20g0000300 Simmondsia chinensis HOM05D006821 ORTHO05D008740 3.2e-91 339.3 327 54.4
arahy.Tifrunner.gnm1.ann1.7SV4PL Arachis hypogaea HOM05D006821 ORTHO05D008740 4.2e-91 339.0 329 54.4
QL03p025768 Quercus lobata HOM05D006821 ORTHO05D008740 1.2e-90 337.4 382 51.0
Hund22116 Selenicereus undatus HOM05D006821 ORTHO05D008740 1.6e-90 337.0 327 54.1
AUR62004944 Chenopodium quinoa HOM05D006821 ORTHO05D008740 3.5e-90 335.9 330 53.9
MBI11_g26138_MAGBIO Magnolia biondii HOM05D006821 ORTHO05D008740 4.6e-90 335.5 328 54.6
Potri.013G040500 Populus trichocarpa HOM05D006821 ORTHO05D008740 1.3e-89 334.0 334 56.0
Lj1g0025723 Lotus japonicus HOM05D006821 ORTHO05D008740 2.3e-89 333.2 327 54.4
THA.LOC104821676 Tarenaya hassleriana HOM05D006821 ORTHO05D008740 2.3e-89 333.2 325 57.5
CsaV3_2G004180 Cucumis sativus L. HOM05D006821 ORTHO05D008740 6.7e-89 331.6 329 55.0
Phvul.006G101500 Phaseolus vulgaris HOM05D006821 ORTHO05D008740 1.1e-88 330.9 327 52.9
Ca_09420_v3 Cicer arietinum L. HOM05D006821 ORTHO05D008740 2.8e-87 326.2 331 53.5
Eucgr.H04340 Eucalyptus grandis HOM05D006821 ORTHO05D008740 3.7e-87 325.9 328 54.6
Lalb_Chr04g0262251 Lupinus albus HOM05D006821 ORTHO05D008740 1.4e-86 323.9 329 52.0
Medtr7g115070 Medicago truncatula HOM05D006821 ORTHO05D008740 2.4e-86 323.2 335 53.7
DCAR_029732 Daucus carota HOM05D006821 ORTHO05D008740 5.3e-86 322.0 327 53.8
PSO210G3560 Papaver somniferum HOM05D006821 ORTHO05D008740 9.0e-86 321.2 327 52.3
PSO210G3856 Papaver somniferum HOM05D006821 ORTHO05D008740 9.0e-86 321.2 327 52.3
ClCG02G016590 Citrullus lanatus HOM05D006821 ORTHO05D008740 1.2e-85 320.9 328 54.0
VMungo0540G1649 Vigna mungo HOM05D006821 ORTHO05D008740 2.6e-85 319.7 329 52.0
PGR004G1103 Punica granatum HOM05D006821 ORTHO05D008740 1.0e-84 317.8 326 52.5
PSO461G0046 Papaver somniferum HOM05D006821 ORTHO05D008740 3.8e-84 315.8 326 51.5
Sabra05G0046500 Salix brachista HOM05D006821 ORTHO05D008740 1.9e-83 313.5 382 50.3
Sed0012709 Sechium edule HOM05D006821 ORTHO05D008740 3.2e-83 312.8 327 52.6
Lj7A490T61 Lonicera japonica HOM05D006821 ORTHO05D008740 5.5e-83 312.0 389 47.6
Psat2g125040 Pisum sativum HOM05D006821 ORTHO05D008740 4.6e-82 308.9 328 54.6
Thhalv10004570m.g Eutrema salsugineum HOM05D006821 ORTHO05D008740 1.1e-80 304.3 326 50.9
BcaB04g19632 Brassica carinata HOM05D006821 ORTHO05D008740 3.3e-80 302.8 334 50.0
EL10Ac4g09134 Beta vulgaris HOM05D006821 ORTHO05D008740 4.3e-80 302.4 407 44.0
Aa31LG11G8550 Aethionema arabicum HOM05D006821 ORTHO05D008740 7.4e-80 301.6 324 50.6
AL6G40810 Arabidopsis lyrata HOM05D006821 ORTHO05D008740 1.6e-79 300.4 331 49.5
Sp2g20040 Schrenkiella parvula HOM05D006821 ORTHO05D008740 1.6e-79 300.4 324 50.6
Carub.0006s2610 Capsella rubella HOM05D006821 ORTHO05D008740 3.1e-78 296.2 327 48.9
BraA09t36137Z Brassica rapa HOM05D006821 ORTHO05D008740 4.1e-78 295.8 328 49.7
BolC9t53466H Brassica oleracea HOM05D006821 ORTHO05D008740 1.2e-77 294.3 326 51.2
AT5G28830 Arabidopsis thaliana HOM05D006821 ORTHO05D008740 2.6e-77 293.1 320 50.3
A09p04980 Brassica napus HOM05D006821 ORTHO05D008740 2.6e-77 293.1 328 49.7
BcaC04g23721 Brassica carinata HOM05D006821 ORTHO05D008740 5.9e-77 292.0 326 50.9
C09p05380 Brassica napus HOM05D006821 ORTHO05D008740 5.9e-77 292.0 326 50.9
HPP92_024348 Vanilla planifolia HOM05D006821 ORTHO05D008740 3.8e-76 289.3 331 49.2
ATR0606G003 Amborella trichopoda HOM05D006821 ORTHO05D008740 2.5e-75 286.6 330 48.8
CARHR185340 Cardamine hirsuta HOM05D006821 ORTHO05D008740 7.2e-75 285.0 326 49.1
SEGI_00561 Sequoiadendron giganteum HOM05D006821 ORTHO05D008740 2.1e-74 283.5 335 48.4
Dinv04728 Davidia involucrata HOM05D006821 ORTHO05D008740 1.0e-73 281.2 215 67.9
TPR.G6944 Trifolium pratense HOM05D006821 ORTHO05D008740 6.7e-73 278.5 259 57.1
MELO3C004376.2 Cucumis melo HOM05D006821 ORTHO05D008740 2.6e-69 266.5 329 48.6
Cpa.g.sc117.86 Carica papaya HOM05D006821 ORTHO05D008740 1.0e-68 264.6 307 50.2
CDE07G0065 Ceratophyllum demersum HOM05D006821 ORTHO05D008740 1.0e-68 264.6 327 45.9
CDE04G3363 Ceratophyllum demersum HOM05D006821 ORTHO05D008740 2.5e-67 260.0 327 45.3
PSO210G3711 Papaver somniferum HOM05D006821 ORTHO05D008740 1.6e-66 257.3 225 59.1
Nn1g02511 Nelumbo nucifera HOM05D006821 ORTHO05D008740 1.0e-60 238.0 215 56.7
Pp3c20_9750 Physcomitrium patens HOM05D006821 ORTHO05D008740 4.1e-54 216.1 336 40.8
Mapoly0083s0056 Marchantia polymorpha HOM05D006821 ORTHO05D008740 7.7e-45 185.3 339 36.0
Ah.07g201960 Amaranthus hybridus HOM05D006821 ORTHO05D008740 2.7e-37 160.2 333 30.9
AagrBONN_evm.TU.Sc2ySwM_228.4858 Anthoceros agrestis HOM05D006821 ORTHO05D007268 5.0e-36 156.0 334 32.9
SMO259G0008 Selaginella moellendorffii HOM05D006821 ORTHO05D008740 7.0e-30 135.6 228 37.3
CBR_g10979 Chara braunii HOM05D006821 ORTHO05D008740 2.3e-28 130.6 261 33.7
AagrBONN_evm.TU.Sc2ySwM_228.4145 Anthoceros agrestis HOM05D006821 ORTHO05D008740 6.4e-23 112.5 169 39.1
TAR365G0108 Trochodendron aralioides HOM05D006821 ORTHO05D008740 2.3e-12 77.4 144 38.2
CARHR032970 Cardamine hirsuta HOM05D006821 ORTHO05D008740 4.3e-11 73.2 79 48.1
TPR.G24580 Trifolium pratense HOM05D006821 ORTHO05D008740 2.8e-10 70.5 104 44.2
EL10Ac9g21461 Beta vulgaris HOM05D004759 ORTHO05D005722 8.1e-10 68.9 228 24.1
Thecc.02G068600 Theobroma cacao HOM05D004759 ORTHO05D005722 8.1e-10 68.9 245 27.3
Hma1.2p1_0032F.1_g019720 Hydrangea macrophylla HOM05D004759 ORTHO05D005722 2.3e-09 67.4 246 26.8
Cc02_g16670 Coffea canephora HOM05D004759 ORTHO05D005722 3.1e-09 67.0 243 27.6
Ah.01g009490 Amaranthus hybridus HOM05D004759 ORTHO05D005722 4.0e-09 66.6 234 23.9
AUR62010113 Chenopodium quinoa HOM05D004759 ORTHO05D005722 1.5e-08 64.7 306 24.8
Sed0012827 Sechium edule HOM05D000600 ORTHO05D000432 3.4e-08 63.5 238 28.2
AUR62013108 Chenopodium quinoa HOM05D004759 ORTHO05D005722 4.4e-08 63.2 230 23.9
VMungo1127G1183 Vigna mungo HOM05D004759 ORTHO05D005722 5.8e-08 62.8 246 26.4
SMO169G0202 Selaginella moellendorffii HOM05D004759 ORTHO05D005722 1.3e-07 61.6 224 24.1
Gohir.D02G224000 Gossypium hirsutum HOM05D004759 ORTHO05D005722 1.7e-07 61.2 238 27.3
Phvul.011G025600 Phaseolus vulgaris HOM05D004759 ORTHO05D005722 1.7e-07 61.2 246 26.0
HPP92_003524 Vanilla planifolia HOM05D004759 ORTHO05D005722 2.2e-07 60.8 130 27.7
AL7G10680 Arabidopsis lyrata HOM05D004759 ORTHO05D005722 4.9e-07 59.7 228 23.2
CARHR247920 Cardamine hirsuta HOM05D004759 ORTHO05D005722 6.4e-07 59.3 228 22.4
Aa31LG6G16400 Aethionema arabicum HOM05D004759 ORTHO05D005722 8.3e-07 58.9 232 24.1
AT4G38810 Arabidopsis thaliana HOM05D004759 ORTHO05D005722 1.1e-06 58.5 226 22.6
CiPaw.06G125800 Carya illinoinensis HOM05D004759 ORTHO05D005722 1.1e-06 58.5 226 23.0
Hund06394 Selenicereus undatus HOM05D004759 ORTHO05D005722 1.1e-06 58.5 237 26.2
MELO3C028972.2 Cucumis melo HOM05D006821 ORTHO05D034973 1.4e-06 58.2 94 38.3
Hund00052 Selenicereus undatus HOM05D004759 ORTHO05D005722 1.9e-06 57.8 249 25.7
Aa31LG9G3980 Aethionema arabicum HOM05D006821 ORTHO05D059654 2.4e-06 57.4 67 46.3
PGSC0003DMG400001638 Solanum tuberosum HOM05D004759 ORTHO05D005722 4.1e-06 56.6 228 22.4
THA.LOC104824783 Tarenaya hassleriana HOM05D004759 ORTHO05D005722 4.1e-06 56.6 247 24.3
HPP92_003533 Vanilla planifolia HOM05D004759 ORTHO05D005722 5.4e-06 56.2 226 25.2
Aa31sc1953G10 Aethionema arabicum HOM05D006821 ORTHO05D059742 7.1e-06 55.8 40 62.5
C07p63570 Brassica napus HOM05D004759 ORTHO05D005722 7.1e-06 55.8 224 21.0
BolC7t46770H Brassica oleracea HOM05D004759 ORTHO05D005722 7.1e-06 55.8 224 21.0
Zm00001eb224230 Zea mays HOM05D004759 ORTHO05D005722 7.1e-06 55.8 128 25.8


User provided reference genes

Program Settings