Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu038315.2 Olea europaea HOM05D006616 ORTHO05D008435 2.5e-296 1021.5 586 100.0
MSTRG.24176 Avicennia marina HOM05D006616 ORTHO05D008435 1.7e-159 567.0 607 59.0
SalBow2G2978 Salvia bowleyana HOM05D006616 ORTHO05D008435 1.1e-155 554.3 598 54.8
Dinv27270 Davidia involucrata HOM05D006616 ORTHO05D008435 2.5e-155 553.1 512 64.8
SGA_v2.0_scaffold25G11136 Striga asiatica HOM05D006616 ORTHO05D008435 1.2e-152 544.3 506 67.2
Migut.N03264 Erythranthe guttata HOM05D006616 ORTHO05D008435 6.4e-151 538.5 598 57.7
Hma1.2p1_2178F.1_g316210 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 1.0e-148 531.2 497 63.2
GSVIVG01025818001 Vitis vinifera HOM05D006616 ORTHO05D008435 1.9e-142 510.4 492 64.0
Cc10_g12770 Coffea canephora HOM05D006616 ORTHO05D008435 2.8e-138 496.5 502 61.0
Actinidia03423 Actinidia chinensis HOM05D006616 ORTHO05D008435 1.2e-136 491.1 598 54.5
Rhsim11G0071400 Rhododendron simsii HOM05D006616 ORTHO05D008435 1.6e-133 480.7 504 60.1
CAN.G526.15 Capsicum annuum HOM05D006616 ORTHO05D008435 7.9e-133 478.4 595 54.1
Atru.chr1.1509 Acer truncatum HOM05D006616 ORTHO05D008435 8.7e-132 474.9 497 58.8
TAR622G0026 Trochodendron aralioides HOM05D006616 ORTHO05D008435 5.6e-131 472.2 490 60.2
CSS0027023 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 7.4e-131 471.9 555 55.5
Peaxi162Scf00066g00130 Petunia axillaris HOM05D006616 ORTHO05D008435 7.4e-131 471.9 588 55.4
Hund19065 Selenicereus undatus HOM05D006616 ORTHO05D008435 6.9e-129 465.3 509 57.6
Ah.13g077310 Amaranthus hybridus HOM05D006616 ORTHO05D008435 1.9e-126 457.2 549 53.6
Prupe.7G020500 Prunus persica HOM05D006616 ORTHO05D008435 2.1e-125 453.8 497 56.9
Manes.09G002500 Manihot esculenta HOM05D006616 ORTHO05D008435 1.8e-124 450.7 481 58.2
Thecc.05G123900 Theobroma cacao HOM05D006616 ORTHO05D008435 1.5e-123 447.6 490 56.3
MD00G1150000 Malus domestica HOM05D006616 ORTHO05D008435 5.6e-123 445.7 532 53.2
Duzib128G1745 Durio zibethinus HOM05D006616 ORTHO05D008435 1.6e-122 444.1 490 55.9
Cfa019948 Carpinus fangiana HOM05D006616 ORTHO05D008435 3.7e-122 443.0 645 49.1
Lj7A350T24 Lonicera japonica HOM05D006616 ORTHO05D008435 4.8e-122 442.6 550 49.1
Potri.006G032200 Populus trichocarpa HOM05D006616 ORTHO05D008435 4.8e-122 442.6 484 54.8
CANSAT78G0100 Cannabis sativa HOM05D006616 ORTHO05D008435 2.4e-121 440.3 493 56.8
RcHm_v2.0_Chr3g0494671 Rosa chinensis HOM05D006616 ORTHO05D008435 2.4e-121 440.3 482 57.3
Eucgr.A02183 Eucalyptus grandis HOM05D006616 ORTHO05D008435 5.3e-121 439.1 483 58.4
MBI16_g32949_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 5.3e-121 439.1 516 53.9
TWI74G0800 Tripterygium wilfordii HOM05D006616 ORTHO05D008435 3.4e-120 436.4 484 57.9
HanXRQChr05g0149371 Helianthus annuus HOM05D006616 ORTHO05D008435 1.3e-119 434.5 596 50.5
Lj5g0015037 Lotus japonicus HOM05D006616 ORTHO05D008435 1.3e-119 434.5 485 56.9
Lalb_Chr21g0316821 Lupinus albus HOM05D006616 ORTHO05D008435 1.7e-119 434.1 483 57.3
Ca_02795_v3 Cicer arietinum L. HOM05D006616 ORTHO05D008435 1.4e-118 431.0 563 51.2
VMungo0720G0485 Vigna mungo HOM05D006616 ORTHO05D008435 1.4e-118 431.0 566 51.8
Solyc11g005110.3 Solanum lycopersicum HOM05D006616 ORTHO05D008435 1.9e-118 430.6 559 54.0
CSS0040058 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 4.2e-118 429.5 542 53.7
Gorai.007G351400 Gossypium raimondii HOM05D006616 ORTHO05D008435 7.1e-118 428.7 484 55.8
AUR62021025 Chenopodium quinoa HOM05D006616 ORTHO05D008435 9.3e-118 428.3 500 54.2
ECA246G4188 Erigeron canadensis HOM05D006616 ORTHO05D008435 9.3e-118 428.3 543 52.3
Sopen11g001110 Solanum pennellii HOM05D006616 ORTHO05D008435 9.3e-118 428.3 559 53.7
Gohir.A11G305800 Gossypium hirsutum HOM05D006616 ORTHO05D008435 2.7e-117 426.8 484 55.0
AUR62018417 Chenopodium quinoa HOM05D006616 ORTHO05D008435 7.9e-117 425.2 503 54.1
Sabra06G0021500 Salix brachista HOM05D006616 ORTHO05D008435 3.0e-116 423.3 484 54.8
ATR0326G030 Amborella trichopoda HOM05D006616 ORTHO05D008435 3.9e-116 422.9 488 54.9
Aqoxy3G00148 Aquilegia oxysepala HOM05D006616 ORTHO05D008435 5.1e-116 422.5 509 53.6
Nn3g18184 Nelumbo nucifera HOM05D006616 ORTHO05D008435 5.1e-116 422.5 484 57.9
QL07p014063 Quercus lobata HOM05D006616 ORTHO05D008435 8.7e-116 421.8 721 43.7
arahy.Tifrunner.gnm1.ann1.QA0LD5 Arachis hypogaea HOM05D006616 ORTHO05D008435 1.9e-115 420.6 605 49.9
Phvul.007G243700 Phaseolus vulgaris HOM05D006616 ORTHO05D008435 2.5e-115 420.2 572 51.0
PGR042G1816 Punica granatum HOM05D006616 ORTHO05D008435 3.3e-115 419.9 600 50.2
TPR.G13802 Trifolium pratense HOM05D006616 ORTHO05D008435 3.3e-115 419.9 520 53.7
PSO478G1375 Papaver somniferum HOM05D006616 ORTHO05D008435 4.3e-115 419.5 500 53.6
arahy.Tifrunner.gnm1.ann1.958W0C Arachis hypogaea HOM05D006616 ORTHO05D008435 7.4e-115 418.7 605 49.9
Gohir.D11G321200 Gossypium hirsutum HOM05D006616 ORTHO05D008435 1.6e-114 417.5 484 55.2
Glyma.02G162000 Glycine max HOM05D006616 ORTHO05D008435 4.8e-114 416.0 568 50.2
CiPaw.10G044000 Carya illinoinensis HOM05D006616 ORTHO05D008435 6.3e-114 415.6 635 47.6
FAN26G1972 Fragaria x ananassa HOM05D006616 ORTHO05D008435 5.3e-113 412.5 483 56.3
EL10Ac3g07308 Beta vulgaris HOM05D006616 ORTHO05D008435 3.4e-112 409.8 522 52.7
Medtr1g051155 Medicago truncatula HOM05D006616 ORTHO05D008435 2.9e-111 406.8 482 55.2
FAN19G2668 Fragaria x ananassa HOM05D006616 ORTHO05D008435 6.5e-111 405.6 486 54.5
FAN28G1824 Fragaria x ananassa HOM05D006616 ORTHO05D008435 8.5e-111 405.2 487 56.1
Psat6g087360 Pisum sativum HOM05D006616 ORTHO05D008435 1.1e-110 404.8 485 54.0
CsaV3_3G040470 Cucumis sativus L. HOM05D006616 ORTHO05D008435 1.4e-110 404.4 517 56.1
CDE04G3611 Ceratophyllum demersum HOM05D006616 ORTHO05D008435 2.5e-110 403.7 482 55.0
DCAR_014373 Daucus carota HOM05D006616 ORTHO05D008435 9.3e-110 401.7 482 55.0
Aa31LG3G1010 Aethionema arabicum HOM05D006616 ORTHO05D008435 3.6e-109 399.8 501 53.3
unitig_52.g17546 Utricularia gibba HOM05D006616 ORTHO05D008435 4.6e-109 399.4 551 50.1
Ciclev10011646m.g Citrus clementina HOM05D006616 ORTHO05D008435 6.1e-109 399.1 483 54.5
THA.LOC104815412 Tarenaya hassleriana HOM05D006616 ORTHO05D008435 3.0e-108 396.7 514 54.1
Sed0024074 Sechium edule HOM05D006616 ORTHO05D008435 2.5e-107 393.7 578 50.2
Os01g0916300 Oryza sativa ssp. japonica HOM05D006616 ORTHO05D008435 2.2e-103 380.6 573 47.6
Sp4g23340 Schrenkiella parvula HOM05D006616 ORTHO05D008435 3.8e-103 379.8 499 51.9
HPP92_023122 Vanilla planifolia HOM05D006616 ORTHO05D008435 4.2e-102 376.3 482 53.1
Thhalv10002504m.g Eutrema salsugineum HOM05D006616 ORTHO05D008435 5.5e-102 375.9 503 52.3
AT2G41020 Arabidopsis thaliana HOM05D006616 ORTHO05D008435 1.4e-100 371.3 514 50.0
AL4G39000 Arabidopsis lyrata HOM05D006616 ORTHO05D008435 3.0e-100 370.2 517 49.7
Zm00001eb364810 Zea mays HOM05D006616 ORTHO05D008435 4.4e-99 366.3 497 51.3
BcaC02g12875 Brassica carinata HOM05D006616 ORTHO05D008435 3.7e-98 363.2 489 51.7
C04p68740 Brassica napus HOM05D006616 ORTHO05D008435 8.2e-98 362.1 489 52.1
BraA04t18591Z Brassica rapa HOM05D006616 ORTHO05D002641 1.3e-95 354.8 506 50.2
PSO017G2359 Papaver somniferum HOM05D006616 ORTHO05D008435 2.9e-95 353.6 424 54.0
A04p31340 Brassica napus HOM05D006616 ORTHO05D002641 1.1e-94 351.7 506 49.4
Carub.0004s2335 Capsella rubella HOM05D006616 ORTHO05D008435 4.2e-94 349.7 514 51.6
Lsat_1_v5_gn_6_110180 Lactuca sativa HOM05D006616 ORTHO05D008435 7.2e-94 349.0 600 41.7
BolC4t28379H Brassica oleracea HOM05D006616 ORTHO05D008435 1.6e-93 347.8 482 51.2
Nitab4.5_0001168g0150 Nicotiana tabacum HOM05D006616 ORTHO05D008435 1.4e-92 344.7 606 40.9
CARHR136140 Cardamine hirsuta HOM05D006616 ORTHO05D008435 2.2e-90 337.4 460 50.9
FvH4_1g29230 Fragaria vesca HOM05D006616 ORTHO05D008435 2.2e-87 327.4 484 50.0
Haze_20291 Corylus avellana HOM05D006616 ORTHO05D008435 3.0e-84 317.0 921 35.1
ClCG10G015990 Citrullus lanatus HOM05D006616 ORTHO05D008435 2.2e-82 310.8 482 50.4
Pp3c10_1890 Physcomitrium patens HOM05D006616 ORTHO05D008435 5.9e-80 302.8 572 44.2
Pp3c10_1896 Physcomitrium patens HOM05D006616 ORTHO05D008435 5.9e-80 302.8 572 44.2
Mapoly0043s0041 Marchantia polymorpha HOM05D006616 ORTHO05D008435 8.5e-79 298.9 619 40.1
MELO3C009780.2 Cucumis melo HOM05D006616 ORTHO05D008435 2.7e-77 293.9 584 42.5
Hma1.2p1_2178F.1_g316200 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 2.8e-61 240.7 260 53.1
Sc13g0000840 Simmondsia chinensis HOM05D006616 ORTHO05D008435 8.9e-60 235.7 214 59.8
Nitab4.5_0003863g0020 Nicotiana tabacum HOM05D006616 ORTHO05D008435 1.1e-57 228.8 281 48.0
Nitab4.5_0003863g0030 Nicotiana tabacum HOM05D006616 ORTHO05D008435 4.4e-51 206.8 286 47.6
SEGI_15760 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 8.1e-45 186.0 128 76.6
Cpa.g.sc33.190 Carica papaya HOM05D006616 ORTHO05D008435 3.1e-44 184.1 228 47.8
AagrBONN_evm.TU.Sc2ySwM_228.200 Anthoceros agrestis HOM05D006616 ORTHO05D008435 2.6e-43 181.0 309 37.9
SEGI_28853 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 2.6e-43 181.0 381 41.7
Actinidia25416 Actinidia chinensis HOM05D006616 ORTHO05D008435 3.5e-40 170.6 252 44.4
COL.COLO4_33517 Corchorus olitorius HOM05D006616 ORTHO05D008435 6.6e-39 166.4 159 56.6
SMO339G0010 Selaginella moellendorffii HOM05D006616 ORTHO05D008435 1.2e-35 155.6 96 81.2
vmacro00862 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 9.9e-35 152.5 124 70.2
FAN23G2418 Fragaria x ananassa HOM05D006616 ORTHO05D008435 3.0e-31 141.0 82 91.5
Psat1g016240 Pisum sativum HOM05D006616 ORTHO05D008435 5.8e-27 126.7 148 50.7
Migut.C01363 Erythranthe guttata HOM05D006616 ORTHO05D008435 1.7e-26 125.2 171 47.4
Psat7g065560 Pisum sativum HOM05D006616 ORTHO05D008435 6.4e-26 123.2 148 49.3
CBR_g8767 Chara braunii HOM05D006616 ORTHO05D008435 3.9e-23 114.0 415 33.7
SHI24850 Sapria himalayana HOM05D006616 ORTHO05D008435 3.3e-22 110.9 133 47.4
vmacro00863 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 3.3e-22 110.9 95 64.2
Actinidia29490 Actinidia chinensis HOM05D006616 ORTHO05D008435 2.9e-18 97.8 144 45.1
MBI16_g47221_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 2.1e-16 91.7 164 40.2
Cre12.g527600 Chlamydomonas reinhardtii HOM05D006616 ORTHO05D008435 1.5e-14 85.5 93 49.5
MCO09G511 Micromonas commoda HOM05D006616 ORTHO05D008435 1.3e-13 82.4 364 35.2
PSO478G1191 Papaver somniferum HOM05D006616 ORTHO05D008435 9.0e-12 76.3 197 37.6
BcaC02g07966 Brassica carinata HOM05D001681 ORTHO05D001589 4.5e-11 73.9 50 76.0


User provided reference genes

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