Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu038268.1 Olea europaea HOM05D001068 ORTHO05D013681 1.1e-34 149.4 75 100.0
Oeu000573.1 Olea europaea HOM05D001068 ORTHO05D002190 7.7e-33 143.3 73 97.3
Oeu000574.1 Olea europaea HOM05D001068 ORTHO05D002190 6.5e-32 140.2 75 90.7
DCAR_009762 Daucus carota HOM05D001068 ORTHO05D002190 8.8e-29 129.8 75 84.0
PGSC0003DMG400010548 Solanum tuberosum HOM05D001068 ORTHO05D002190 1.5e-28 129.0 75 82.7
Solyc10g008110.4 Solanum lycopersicum HOM05D001068 ORTHO05D002190 2.0e-28 128.6 75 81.3
Sopen10g003980 Solanum pennellii HOM05D001068 ORTHO05D002190 3.3e-28 127.9 75 81.3
SalBow7G1339 Salvia bowleyana HOM05D001068 ORTHO05D002190 4.4e-28 127.5 75 81.3
DCAR_010695 Daucus carota HOM05D001068 ORTHO05D002190 5.7e-28 127.1 75 78.7
Eucgr.K01080 Eucalyptus grandis HOM05D001068 ORTHO05D002190 7.4e-28 126.7 75 80.0
Lj8A106G57 Lonicera japonica HOM05D001068 ORTHO05D002190 7.4e-28 126.7 75 81.3
TAR627G0187 Trochodendron aralioides HOM05D001068 ORTHO05D002190 7.4e-28 126.7 73 80.8
Rhsim06G0135500 Rhododendron simsii HOM05D001068 ORTHO05D002190 1.7e-27 125.6 75 78.7
Actinidia10988 Actinidia chinensis HOM05D001068 ORTHO05D002190 2.8e-27 124.8 75 77.3
CAN.G782.15 Capsicum annuum HOM05D001068 ORTHO05D002190 2.8e-27 124.8 75 78.7
Cfa014679 Carpinus fangiana HOM05D001068 ORTHO05D002190 2.8e-27 124.8 75 78.7
Migut.M00195 Erythranthe guttata HOM05D001068 ORTHO05D002190 3.7e-27 124.4 75 78.7
Hma1.2p1_0002F.1_g002410 Hydrangea macrophylla HOM05D001068 ORTHO05D002190 3.7e-27 124.4 75 78.7
Potri.019G092600 Populus trichocarpa HOM05D001068 ORTHO05D002190 3.7e-27 124.4 75 78.7
Nitab4.5_0002196g0050 Nicotiana tabacum HOM05D001068 ORTHO05D002190 4.8e-27 124.0 75 78.7
Potri.013G123500 Populus trichocarpa HOM05D001068 ORTHO05D002190 4.8e-27 124.0 75 78.7
Sabra13G0102500 Salix brachista HOM05D001068 ORTHO05D002190 4.8e-27 124.0 75 78.7
vmacro12355 Vaccinium macrocarpon HOM05D001068 ORTHO05D002190 4.8e-27 124.0 75 77.3
CSS0049947 Camellia sinensis var. sinensis HOM05D001068 ORTHO05D002190 6.3e-27 123.6 75 76.0
AUR62036085 Chenopodium quinoa HOM05D001068 ORTHO05D002190 6.3e-27 123.6 75 77.3
Ciclev10014502m.g Citrus clementina HOM05D001068 ORTHO05D002190 6.3e-27 123.6 73 79.5
MD17G1234100 Malus domestica HOM05D001068 ORTHO05D002190 6.3e-27 123.6 73 78.1
Peaxi162Scf00241g01211 Petunia axillaris HOM05D001068 ORTHO05D002190 6.3e-27 123.6 75 77.3
CANSAT64G0075 Cannabis sativa HOM05D001068 ORTHO05D002190 8.2e-27 123.2 75 77.3
CiPaw.03G183200 Carya illinoinensis HOM05D001068 ORTHO05D002190 8.2e-27 123.2 75 76.0
AUR62036084 Chenopodium quinoa HOM05D001068 ORTHO05D002190 8.2e-27 123.2 75 77.3
Haze_13278 Corylus avellana HOM05D001068 ORTHO05D002190 8.2e-27 123.2 74 77.0
AUR62035387 Chenopodium quinoa HOM05D001068 ORTHO05D002190 1.1e-26 122.9 73 78.1
Cc05_g07930 Coffea canephora HOM05D001068 ORTHO05D002190 1.1e-26 122.9 75 77.3
Prupe.3G127000 Prunus persica HOM05D001068 ORTHO05D002190 1.1e-26 122.9 75 76.0
CSS0000404 Camellia sinensis var. sinensis HOM05D001068 ORTHO05D002190 1.4e-26 122.5 75 74.7
arahy.Tifrunner.gnm1.ann1.JX5WJ5 Arachis hypogaea HOM05D001068 ORTHO05D002190 1.8e-26 122.1 75 73.3
Manes.12G092800 Manihot esculenta HOM05D001068 ORTHO05D002190 1.8e-26 122.1 75 74.7
Aqoxy1G02246_Aqoxy1G02247 Aquilegia oxysepala HOM05D001068 ORTHO05D002190 3.1e-26 121.3 70 78.6
Cpa.g.sc50.2 Carica papaya HOM05D001068 ORTHO05D002190 3.1e-26 121.3 75 77.3
Lj3g0024792 Lotus japonicus HOM05D001068 ORTHO05D002190 3.1e-26 121.3 74 74.3
arahy.Tifrunner.gnm1.ann1.C7HVNL Arachis hypogaea HOM05D001068 ORTHO05D002190 4.1e-26 120.9 75 72.0
HanXRQChr17g0565261 Helianthus annuus HOM05D001068 ORTHO05D002190 4.1e-26 120.9 72 77.8
TWI59G1279 Tripterygium wilfordii HOM05D001068 ORTHO05D002190 4.1e-26 120.9 75 73.3
Medtr4g079290 Medicago truncatula HOM05D001068 ORTHO05D002190 5.3e-26 120.6 75 72.0
Nn1g04278 Nelumbo nucifera HOM05D001068 ORTHO05D002190 5.3e-26 120.6 75 74.7
GSVIVG01020650001 Vitis vinifera HOM05D001068 ORTHO05D002190 5.3e-26 120.6 73 76.7
Sabra19G0105800 Salix brachista HOM05D001068 ORTHO05D002190 7.0e-26 120.2 75 76.0
FAN05G5054 Fragaria x ananassa HOM05D001068 ORTHO05D002190 9.1e-26 119.8 74 73.0
MBI07_g06445_MAGBIO Magnolia biondii HOM05D001068 ORTHO05D002190 9.1e-26 119.8 75 73.3
TPR.G34856 Trifolium pratense HOM05D001068 ORTHO05D002190 9.1e-26 119.8 75 70.7
EL10Ac9g20848 Beta vulgaris HOM05D001068 ORTHO05D002190 1.2e-25 119.4 75 72.0
RcHm_v2.0_Chr2g0128641 Rosa chinensis HOM05D001068 ORTHO05D002190 1.2e-25 119.4 73 74.0
Ah.01g003900 Amaranthus hybridus HOM05D001068 ORTHO05D002190 1.5e-25 119.0 75 74.7
ClCG02G010170 Citrullus lanatus HOM05D001068 ORTHO05D002190 1.5e-25 119.0 73 75.3
HanXRQChr17g0565241 Helianthus annuus HOM05D001068 ORTHO05D002190 2.0e-25 118.6 72 76.4
HanXRQChr16g0526381 Helianthus annuus HOM05D001068 ORTHO05D002190 2.6e-25 118.2 74 71.6
SGA_v2.0_scaffold258G45790 Striga asiatica HOM05D001068 ORTHO05D002190 2.6e-25 118.2 69 81.2
CsaV3_2G034560 Cucumis sativus L. HOM05D001068 ORTHO05D002190 3.5e-25 117.9 73 74.0
DCAR_021268 Daucus carota HOM05D001068 ORTHO05D002190 3.5e-25 117.9 75 73.3
HanXRQChr16g0526411 Helianthus annuus HOM05D001068 ORTHO05D013681 3.5e-25 117.9 74 71.6
MELO3C019320.2 Cucumis melo HOM05D001068 ORTHO05D002190 5.9e-25 117.1 73 74.0
ECA234G1381 Erigeron canadensis HOM05D001068 ORTHO05D002190 5.9e-25 117.1 72 75.0
Glyma.06G285400 Glycine max HOM05D001068 ORTHO05D002190 5.9e-25 117.1 71 74.6
Hund00993 Selenicereus undatus HOM05D001068 ORTHO05D002190 5.9e-25 117.1 69 78.3
FAN14G5876 Fragaria x ananassa HOM05D001068 ORTHO05D002190 1.0e-24 116.3 74 70.3
Lsat_1_v5_gn_4_28520 Lactuca sativa HOM05D001068 ORTHO05D002190 1.0e-24 116.3 72 75.0
Ca_18909_v3 Cicer arietinum L. HOM05D001068 ORTHO05D002190 1.3e-24 115.9 75 70.7
ATR0602G078 Amborella trichopoda HOM05D001068 ORTHO05D002190 1.7e-24 115.5 73 68.5
Lalb_Chr03g0029731 Lupinus albus HOM05D001068 ORTHO05D002190 1.7e-24 115.5 75 70.7
PGR142G0739 Punica granatum HOM05D001068 ORTHO05D002190 1.7e-24 115.5 75 70.7
Sed0001164 Sechium edule HOM05D001068 ORTHO05D002190 1.7e-24 115.5 71 74.6
Sed0007318 Sechium edule HOM05D001068 ORTHO05D002190 1.7e-24 115.5 71 74.6
Glyma.12G120300 Glycine max HOM05D001068 ORTHO05D002190 2.2e-24 115.2 71 71.8
Thecc.02G188700 Theobroma cacao HOM05D001068 ORTHO05D002190 2.2e-24 115.2 75 70.7
HPP92_027388 Vanilla planifolia HOM05D001068 ORTHO05D002190 2.2e-24 115.2 70 75.7
Duzib248G0800 Durio zibethinus HOM05D001068 ORTHO05D002190 2.9e-24 114.8 75 72.0
VMungo1127G1678 Vigna mungo HOM05D001068 ORTHO05D002190 2.9e-24 114.8 71 70.4
COL.COLO4_04707 Corchorus olitorius HOM05D001068 ORTHO05D002190 5.0e-24 114.0 75 70.7
A10p05020 Brassica napus HOM05D001068 ORTHO05D002190 6.5e-24 113.6 72 70.8
BraA10t42768Z Brassica rapa HOM05D001068 ORTHO05D002190 6.5e-24 113.6 72 70.8
MD09G1241500 Malus domestica HOM05D001068 ORTHO05D013681 6.5e-24 113.6 69 75.4
Phvul.011G116000 Phaseolus vulgaris HOM05D001068 ORTHO05D002190 6.5e-24 113.6 71 70.4
BcaB02g06807 Brassica carinata HOM05D001068 ORTHO05D002190 8.5e-24 113.2 72 70.8
PSO541G4864 Papaver somniferum HOM05D001068 ORTHO05D002190 8.5e-24 113.2 75 69.3
PSO675G3167 Papaver somniferum HOM05D001068 ORTHO05D002190 8.5e-24 113.2 75 69.3
BcaC05g24277 Brassica carinata HOM05D001068 ORTHO05D002190 1.1e-23 112.8 72 69.4
BcaC05g24285 Brassica carinata HOM05D001068 ORTHO05D013681 1.1e-23 112.8 72 69.4
C05p04620 Brassica napus HOM05D001068 ORTHO05D002190 1.1e-23 112.8 72 69.4
ECA236G4578 Erigeron canadensis HOM05D001068 ORTHO05D002190 1.1e-23 112.8 72 69.4
BolC5t29234H Brassica oleracea HOM05D001068 ORTHO05D002190 1.4e-23 112.5 72 69.4
Cc00_g26970 Coffea canephora HOM05D001068 ORTHO05D013681 1.4e-23 112.5 75 74.7
ECA234G0082 Erigeron canadensis HOM05D001068 ORTHO05D002190 1.4e-23 112.5 73 68.5
GSVIVG01023773001 Vitis vinifera HOM05D001068 ORTHO05D013681 1.9e-23 112.1 73 71.2
Duzib052G0179 Durio zibethinus HOM05D001068 ORTHO05D002190 2.5e-23 111.7 72 70.8
AL1G16310 Arabidopsis lyrata HOM05D001068 ORTHO05D002190 3.2e-23 111.3 72 69.4
AT1G06290 Arabidopsis thaliana HOM05D001068 ORTHO05D002190 3.2e-23 111.3 72 69.4
AT3G06690 Arabidopsis thaliana HOM05D001068 ORTHO05D013681 3.2e-23 111.3 72 69.4
BcaB02g06806 Brassica carinata HOM05D001068 ORTHO05D002190 3.2e-23 111.3 72 69.4
Carub.0001s0566 Capsella rubella HOM05D001068 ORTHO05D002190 3.2e-23 111.3 72 69.4
Lj3g0009326 Lotus japonicus HOM05D001068 ORTHO05D002190 3.2e-23 111.3 75 68.0
AT1G06310 Arabidopsis thaliana HOM05D001068 ORTHO05D002190 5.5e-23 110.5 72 69.4
Thhalv10006988m.g Eutrema salsugineum HOM05D001068 ORTHO05D002190 5.5e-23 110.5 72 69.4
Gorai.005G198300 Gossypium raimondii HOM05D001068 ORTHO05D002190 7.2e-23 110.2 75 68.0
Gohir.D02G176600 Gossypium hirsutum HOM05D001068 ORTHO05D002190 1.2e-22 109.4 75 68.0
AL1G16320 Arabidopsis lyrata HOM05D001068 ORTHO05D002190 1.6e-22 109.0 72 68.1
Gohir.D12G144200 Gossypium hirsutum HOM05D001068 ORTHO05D002190 2.1e-22 108.6 75 68.0
Gorai.008G155500 Gossypium raimondii HOM05D001068 ORTHO05D002190 2.1e-22 108.6 75 68.0
CDE08G0847 Ceratophyllum demersum HOM05D001068 ORTHO05D002190 2.7e-22 108.2 75 62.7
Thhalv10009440m.g Eutrema salsugineum HOM05D001068 ORTHO05D002190 2.7e-22 108.2 72 68.1
Zm00001eb148110 Zea mays HOM05D001068 ORTHO05D002190 2.7e-22 108.2 71 69.0
Sp1g05100 Schrenkiella parvula HOM05D001068 ORTHO05D002190 3.6e-22 107.8 72 68.1
CARHR005870 Cardamine hirsuta HOM05D001068 ORTHO05D002190 4.7e-22 107.5 72 68.1
Gohir.A12G139700 Gossypium hirsutum HOM05D001068 ORTHO05D002190 4.7e-22 107.5 75 66.7
A10p05050 Brassica napus HOM05D001068 ORTHO05D002190 6.1e-22 107.1 70 67.1
BraA10t42771Z Brassica rapa HOM05D001068 ORTHO05D002190 6.1e-22 107.1 70 67.1
Aa31LG1G7310 Aethionema arabicum HOM05D001068 ORTHO05D002190 8.0e-22 106.7 71 69.0
Gohir.A03G153650 Gossypium hirsutum HOM05D001068 ORTHO05D002190 1.8e-21 105.5 75 64.0
Gohir.D01G018400 Gossypium hirsutum HOM05D001068 ORTHO05D002190 2.3e-21 105.1 72 65.3
Gorai.002G020600 Gossypium raimondii HOM05D001068 ORTHO05D002190 2.3e-21 105.1 72 65.3
THA.LOC104800850 Tarenaya hassleriana HOM05D001068 ORTHO05D002190 2.3e-21 105.1 69 68.1
Gohir.A01G019900 Gossypium hirsutum HOM05D001068 ORTHO05D002190 3.0e-21 104.8 64 71.9
Gohir.D01G018500 Gossypium hirsutum HOM05D001068 ORTHO05D002190 3.0e-21 104.8 72 65.3
Gorai.002G020700 Gossypium raimondii HOM05D001068 ORTHO05D002190 3.0e-21 104.8 64 71.9
BcaC05g24275 Brassica carinata HOM05D001068 ORTHO05D002190 5.2e-21 104.0 70 65.7
C05p04640 Brassica napus HOM05D001068 ORTHO05D002190 5.2e-21 104.0 70 65.7
BolC5t29237H Brassica oleracea HOM05D001068 ORTHO05D002190 5.2e-21 104.0 70 65.7
Gohir.A01G019800 Gossypium hirsutum HOM05D001068 ORTHO05D002190 6.7e-21 103.6 72 63.9
Os06g0354500 Oryza sativa ssp. japonica HOM05D001068 ORTHO05D002190 1.1e-20 102.8 71 66.2
SEGI_33260 Sequoiadendron giganteum HOM05D001068 ORTHO05D002190 5.7e-20 100.5 69 65.2
SEGI_21730 Sequoiadendron giganteum HOM05D001068 ORTHO05D002190 8.2e-19 96.7 69 65.2
SEGI_20994 Sequoiadendron giganteum HOM05D001068 ORTHO05D002190 2.4e-18 95.1 69 62.3
SMO266G0061 Selaginella moellendorffii HOM05D001068 ORTHO05D002190 4.1e-18 94.4 73 58.9
SEGI_29810 Sequoiadendron giganteum HOM05D001068 ORTHO05D002190 7.0e-18 93.6 68 63.2
Carub.0001s0567 Capsella rubella HOM05D001068 ORTHO05D013681 3.5e-17 91.3 67 64.2
Pp3c26_540 Physcomitrium patens HOM05D001068 ORTHO05D002190 4.5e-17 90.9 73 57.5
Pp3c13_22370 Physcomitrium patens HOM05D001068 ORTHO05D002190 2.9e-16 88.2 72 56.9
AagrBONN_evm.TU.Sc2ySwM_362.999 Anthoceros agrestis HOM05D001068 ORTHO05D002190 2.5e-15 85.1 73 49.3
Lsat_1_v5_gn_4_28500 Lactuca sativa HOM05D001068 ORTHO05D013681 2.1e-14 82.0 59 64.4
BcaB02g06788 Brassica carinata HOM05D001068 ORTHO05D002190 2.7e-14 81.6 70 57.1
VMungo1127G1906 Vigna mungo HOM05D001068 ORTHO05D002190 8.8e-13 76.6 49 69.4
Dinv19990 Davidia involucrata HOM05D001068 ORTHO05D002190 1.2e-12 76.3 66 62.1
Mapoly0007s0119 Marchantia polymorpha HOM05D001068 ORTHO05D002190 1.5e-12 75.9 72 50.0
A10p05030 Brassica napus HOM05D001068 ORTHO05D013681 2.0e-12 75.5 68 55.9
BcaC05g24280 Brassica carinata HOM05D001068 ORTHO05D002190 2.8e-11 71.6 55 63.6
FvH4_6g26900 Fragaria vesca HOM05D001068 ORTHO05D002190 5.3e-10 67.4 45 68.9
BcaB02g06804 Brassica carinata HOM05D001068 ORTHO05D002190 4.5e-09 64.3 44 65.9
RcHm_v2.0_Chr6g0266301 Rosa chinensis HOM05D001068 ORTHO05D013681 5.9e-09 63.9 49 63.3
GSVIVG01022584001 Vitis vinifera HOM05D001068 ORTHO05D013681 5.0e-08 60.8 38 73.7


User provided reference genes

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