Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu037626.1 Olea europaea HOM05D003727 ORTHO05D004731 1.1e-172 609.8 298 100.0
Oeu022704.1 Olea europaea HOM05D003727 ORTHO05D004731 1.2e-156 556.6 288 94.1
MSTRG.21742 Avicennia marina HOM05D003727 ORTHO05D004731 3.0e-149 531.9 288 89.6
Migut.N00003 Erythranthe guttata HOM05D003727 ORTHO05D004731 2.0e-148 529.3 288 89.2
Nitab4.5_0004046g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 3.7e-147 525.0 287 87.8
Cc03_g00160 Coffea canephora HOM05D003727 ORTHO05D004731 6.4e-147 524.2 284 88.4
Solyc01g057210.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 1.8e-146 522.7 291 86.9
Sopen01g021750 Solanum pennellii HOM05D003727 ORTHO05D004731 1.8e-146 522.7 291 86.9
CAN.G179.19 Capsicum annuum HOM05D003727 ORTHO05D004731 4.1e-146 521.5 287 86.8
PGSC0003DMG400013068 Solanum tuberosum HOM05D003727 ORTHO05D004731 1.2e-145 520.0 291 86.6
Rhsim04G0248100 Rhododendron simsii HOM05D003727 ORTHO05D004731 3.5e-145 518.5 290 86.9
Nitab4.5_0001334g0060 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.5e-143 513.1 302 83.1
CSS0023101 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 2.5e-143 512.3 288 85.8
CSS0027704 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 3.3e-143 511.9 288 86.1
GSVIVG01017684001 Vitis vinifera HOM05D003727 ORTHO05D004731 1.2e-142 510.0 288 85.8
HanXRQChr07g0194351 Helianthus annuus HOM05D003727 ORTHO05D004731 1.0e-141 506.9 288 84.0
Duzib151G0200 Durio zibethinus HOM05D003727 ORTHO05D004731 1.5e-140 503.1 290 84.5
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla HOM05D003727 ORTHO05D004731 1.5e-140 503.1 288 84.0
Nitab4.5_0003998g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.5e-140 503.1 283 84.8
Lsat_1_v5_gn_6_70560 Lactuca sativa HOM05D003727 ORTHO05D004731 2.0e-140 502.7 284 84.2
Thecc.04G312500 Theobroma cacao HOM05D003727 ORTHO05D004731 2.0e-140 502.7 288 84.0
Peaxi162Scf00126g01030 Petunia axillaris HOM05D003727 ORTHO05D004731 2.6e-140 502.3 290 84.1
Aqoxy7G02168 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 4.4e-140 501.5 288 84.7
CAN.G484.91 Capsicum annuum HOM05D003727 ORTHO05D004731 4.4e-140 501.5 287 84.7
PSO357G0471 Papaver somniferum HOM05D003727 ORTHO05D004731 4.4e-140 501.5 288 84.7
Gohir.A01G036300 Gossypium hirsutum HOM05D003727 ORTHO05D004731 9.8e-140 500.4 288 84.4
Cpa.g.sc146.27 Carica papaya HOM05D003727 ORTHO05D004731 1.7e-139 499.6 291 84.5
PSO170G4280 Papaver somniferum HOM05D003727 ORTHO05D004731 1.7e-139 499.6 288 84.4
PGR004G0380 Punica granatum HOM05D003727 ORTHO05D004731 2.2e-139 499.2 290 84.1
QL06p014168 Quercus lobata HOM05D003727 ORTHO05D004731 2.2e-139 499.2 287 84.0
Peaxi162Scf00668g00119 Petunia axillaris HOM05D003727 ORTHO05D004731 6.4e-139 497.7 283 84.1
Aqoxy5G02791 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 8.3e-139 497.3 288 84.4
Lj6g0008986 Lotus japonicus HOM05D003727 ORTHO05D004731 8.3e-139 497.3 288 83.7
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea HOM05D003727 ORTHO05D004731 1.1e-138 496.9 288 84.0
VMungo1309G1883 Vigna mungo HOM05D003727 ORTHO05D004731 1.9e-138 496.1 288 84.4
ECA233G2414 Erigeron canadensis HOM05D003727 ORTHO05D004731 2.4e-138 495.7 288 82.3
Hund12253 Selenicereus undatus HOM05D003727 ORTHO05D004731 3.2e-138 495.4 289 82.7
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea HOM05D003727 ORTHO05D004731 9.2e-138 493.8 287 83.6
Gorai.002G032100 Gossypium raimondii HOM05D003727 ORTHO05D004731 9.2e-138 493.8 288 83.3
Manes.03G211600 Manihot esculenta HOM05D003727 ORTHO05D004731 1.2e-137 493.4 288 83.3
EL10Ac3g06260 Beta vulgaris HOM05D003727 ORTHO05D004731 1.6e-137 493.0 284 83.5
Glyma.09G079000 Glycine max HOM05D003727 ORTHO05D004731 1.6e-137 493.0 288 83.3
Gohir.D01G023600 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.6e-137 493.0 288 83.3
Sc25g0002190 Simmondsia chinensis HOM05D003727 ORTHO05D004731 1.6e-137 493.0 315 77.8
TAR365G0780 Trochodendron aralioides HOM05D003727 ORTHO05D004731 1.6e-137 493.0 288 84.4
Cfa015726 Carpinus fangiana HOM05D003727 ORTHO05D004731 2.7e-137 492.3 288 83.3
Prupe.1G105800 Prunus persica HOM05D003727 ORTHO05D004731 2.7e-137 492.3 288 83.3
ClCG04G007480 Citrullus lanatus HOM05D003727 ORTHO05D004731 4.6e-137 491.5 289 82.4
unitig_699.g19980 Utricularia gibba HOM05D003727 ORTHO05D004731 4.6e-137 491.5 288 82.3
Ciclev10005215m.g Citrus clementina HOM05D003727 ORTHO05D004731 6.0e-137 491.1 290 83.4
Glyma.15G188500 Glycine max HOM05D003727 ORTHO05D004731 1.0e-136 490.3 288 83.0
Phvul.009G219900 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 1.7e-136 489.6 288 83.3
RcHm_v2.0_Chr4g0427421 Rosa chinensis HOM05D003727 ORTHO05D004731 1.7e-136 489.6 290 83.4
FvH4_4g21480 Fragaria vesca HOM05D003727 ORTHO05D004731 2.3e-136 489.2 288 82.6
FAN12G0484 Fragaria x ananassa HOM05D003727 ORTHO05D004731 2.3e-136 489.2 288 82.6
Sed0005057 Sechium edule HOM05D003727 ORTHO05D004731 2.3e-136 489.2 289 81.7
Lalb_Chr11g0073551 Lupinus albus HOM05D003727 ORTHO05D004731 5.0e-136 488.0 288 81.9
Sabra10G0001600 Salix brachista HOM05D003727 ORTHO05D004731 8.6e-136 487.3 288 82.6
SalBow8G0722 Salvia bowleyana HOM05D003727 ORTHO05D004731 1.1e-135 486.9 284 83.1
Haze_00772 Corylus avellana HOM05D003727 ORTHO05D004731 3.3e-135 485.3 295 81.7
DCAR_023405 Daucus carota HOM05D003727 ORTHO05D004731 3.3e-135 485.3 288 81.2
Potri.010G002000 Populus trichocarpa HOM05D003727 ORTHO05D004731 3.3e-135 485.3 288 81.9
SGA_v2.0_scaffold157G37383 Striga asiatica HOM05D003727 ORTHO05D004731 3.3e-135 485.3 352 70.7
Lalb_Chr23g0276061 Lupinus albus HOM05D003727 ORTHO05D004731 4.3e-135 485.0 288 82.6
TPR.G15491 Trifolium pratense HOM05D003727 ORTHO05D004731 4.3e-135 485.0 289 81.0
Gohir.A10G176400 Gossypium hirsutum HOM05D003727 ORTHO05D004731 5.6e-135 484.6 288 81.9
CiPaw.01G129700 Carya illinoinensis HOM05D003727 ORTHO05D004731 7.3e-135 484.2 288 81.9
CsaV3_4G025780 Cucumis sativus L. HOM05D003727 ORTHO05D004731 7.3e-135 484.2 289 81.0
FAN17G0291 Fragaria x ananassa HOM05D003727 ORTHO05D004731 9.5e-135 483.8 288 81.9
CANSAT78G0237 Cannabis sativa HOM05D003727 ORTHO05D004731 1.6e-134 483.0 291 81.4
Medtr7g024460 Medicago truncatula HOM05D003727 ORTHO05D004731 1.6e-134 483.0 291 81.1
TWI73G0221 Tripterygium wilfordii HOM05D003727 ORTHO05D004731 2.1e-134 482.6 288 81.6
Gorai.011G205200 Gossypium raimondii HOM05D003727 ORTHO05D004731 2.8e-134 482.3 288 81.6
Aa31LG5G17020 Aethionema arabicum HOM05D003727 ORTHO05D004731 3.6e-134 481.9 291 80.1
Gohir.D10G183100 Gossypium hirsutum HOM05D003727 ORTHO05D004731 3.6e-134 481.9 288 81.6
MBI18_g09643_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 1.1e-133 480.3 290 81.4
Nn4g25394 Nelumbo nucifera HOM05D003727 ORTHO05D004731 1.1e-133 480.3 283 83.0
Phvul.009G220000 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 1.1e-133 480.3 288 81.2
THA.LOC104818862 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.4e-133 479.9 291 81.1
Solyc12g098930.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 2.3e-133 479.2 289 80.6
Ca_02357_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 3.1e-133 478.8 298 78.2
Ca_07250_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 3.1e-133 478.8 291 81.8
Sopen12g033680 Solanum pennellii HOM05D003727 ORTHO05D004731 5.2e-133 478.0 289 80.6
Thhalv10020969m.g Eutrema salsugineum HOM05D003727 ORTHO05D004731 6.8e-133 477.6 291 79.7
Sp3g05430 Schrenkiella parvula HOM05D003727 ORTHO05D004731 1.2e-132 476.9 291 79.4
THA.LOC104798546 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.5e-132 476.5 291 80.8
THA.LOC104802717 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.5e-132 476.5 291 80.8
Psat3g179960 Pisum sativum HOM05D003727 ORTHO05D004731 2.6e-132 475.7 291 81.1
HanXRQChr05g0149271 Helianthus annuus HOM05D003727 ORTHO05D004731 4.4e-132 474.9 288 79.9
MD13G1140800 Malus domestica HOM05D003727 ORTHO05D004731 4.4e-132 474.9 288 80.9
Lj4g0016505 Lotus japonicus HOM05D003727 ORTHO05D004731 9.8e-132 473.8 290 79.3
PGSC0003DMG400004685 Solanum tuberosum HOM05D003727 ORTHO05D004731 9.8e-132 473.8 287 79.8
ClCG05G006850 Citrullus lanatus HOM05D003727 ORTHO05D004731 1.3e-131 473.4 289 79.6
Medtr2g045490 Medicago truncatula HOM05D003727 ORTHO05D004731 2.2e-131 472.6 288 79.9
CsaV3_3G015500 Cucumis sativus L. HOM05D003727 ORTHO05D004731 2.9e-131 472.2 289 79.2
Actinidia18506 Actinidia chinensis HOM05D003727 ORTHO05D004731 3.7e-131 471.9 269 84.8
Sed0027316 Sechium edule HOM05D003727 ORTHO05D004731 3.7e-131 471.9 289 78.9
vmacro08010 Vaccinium macrocarpon HOM05D003727 ORTHO05D004731 4.9e-131 471.5 284 82.4
TPR.G39591 Trifolium pratense HOM05D003727 ORTHO05D004731 6.4e-131 471.1 288 78.8
Lj6A700T83 Lonicera japonica HOM05D003727 ORTHO05D004731 1.1e-130 470.3 284 79.2
C03p42180 Brassica napus HOM05D003727 ORTHO05D004731 7.1e-130 467.6 291 79.0
GSVIVG01031319001 Vitis vinifera HOM05D003727 ORTHO05D004731 7.1e-130 467.6 288 79.9
BraA03t12649Z Brassica rapa HOM05D003727 ORTHO05D004731 9.2e-130 467.2 291 79.0
COL.COLO4_34520 Corchorus olitorius HOM05D003727 ORTHO05D004731 9.2e-130 467.2 279 81.4
THA.LOC104827107 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.2e-129 466.8 289 80.6
BolC3t16499H Brassica oleracea HOM05D003727 ORTHO05D004731 2.7e-129 465.7 291 78.7
Carub.0003s0594 Capsella rubella HOM05D003727 ORTHO05D004731 6.0e-129 464.5 291 78.7
PSO210G4254 Papaver somniferum HOM05D003727 ORTHO05D004731 7.8e-129 464.2 286 78.0
BcaC05g30021 Brassica carinata HOM05D003727 ORTHO05D004731 1.7e-128 463.0 289 77.5
Nitab4.5_0000895g0180 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.7e-128 463.0 265 83.0
CARHR081010 Cardamine hirsuta HOM05D003727 ORTHO05D004731 2.3e-128 462.6 289 78.5
PSO761G0171 Papaver somniferum HOM05D003727 ORTHO05D004731 5.1e-128 461.5 286 77.3
BcaC05g29821 Brassica carinata HOM05D003727 ORTHO05D004731 2.5e-127 459.1 289 76.8
A05p41540 Brassica napus HOM05D003727 ORTHO05D004731 2.5e-127 459.1 289 76.8
C05p60740 Brassica napus HOM05D003727 ORTHO05D004731 2.5e-127 459.1 289 76.8
BolC5t34734H Brassica oleracea HOM05D003727 ORTHO05D004731 2.5e-127 459.1 289 76.8
BraA05t22875Z Brassica rapa HOM05D003727 ORTHO05D004731 2.5e-127 459.1 289 76.8
Lj3A840G128 Lonicera japonica HOM05D003727 ORTHO05D004731 2.5e-127 459.1 285 78.9
AT3G06483 Arabidopsis thaliana HOM05D003727 ORTHO05D004731 3.3e-127 458.8 291 77.7
Eucgr.H04122 Eucalyptus grandis HOM05D003727 ORTHO05D004731 3.3e-127 458.8 274 81.0
Nn3g21906 Nelumbo nucifera HOM05D003727 ORTHO05D004731 4.3e-127 458.4 290 80.3
SGA_v2.0_scaffold157G37388 Striga asiatica HOM05D003727 ORTHO05D004731 1.1e-125 453.8 292 77.7
HPP92_001184 Vanilla planifolia HOM05D003727 ORTHO05D004731 1.8e-125 453.0 290 78.6
ATR0796G219 Amborella trichopoda HOM05D003727 ORTHO05D004731 2.3e-125 452.6 289 77.5
MBI19_g32733_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 5.2e-125 451.4 289 77.5
Glyma.17G040500 Glycine max HOM05D003727 ORTHO05D004731 8.9e-125 450.7 291 76.6
Atru.chr4.3143 Acer truncatum HOM05D003727 ORTHO05D004731 1.2e-124 450.3 279 81.4
A03p34710 Brassica napus HOM05D003727 ORTHO05D004731 2.6e-124 449.1 322 71.1
Actinidia00296 Actinidia chinensis HOM05D003727 ORTHO05D004731 7.6e-124 447.6 288 78.1
VMungo1215G3329 Vigna mungo HOM05D003727 ORTHO05D004731 1.7e-123 446.4 289 77.5
CiPaw.02G069500 Carya illinoinensis HOM05D003727 ORTHO05D004731 1.1e-122 443.7 268 81.0
AUR62002558 Chenopodium quinoa HOM05D003727 ORTHO05D004731 2.4e-122 442.6 265 81.9
AL3G17510 Arabidopsis lyrata HOM05D003727 ORTHO05D004731 1.2e-121 440.3 279 78.5
CDE02G0044 Ceratophyllum demersum HOM05D003727 ORTHO05D002799 1.6e-121 439.9 283 77.0
Zm00001eb328730 Zea mays HOM05D003727 ORTHO05D004731 4.6e-121 438.3 290 74.5
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea HOM05D003727 ORTHO05D004731 6.0e-121 438.0 289 73.0
Os07g0637300 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 1.1e-119 433.7 289 74.4
Zm00001eb018000 Zea mays HOM05D003727 ORTHO05D004731 1.5e-119 433.3 291 74.2
Psat1g017520 Pisum sativum HOM05D003727 ORTHO05D004731 1.9e-119 433.0 269 78.1
Os03g0370000 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 6.8e-117 424.5 287 73.5
Dinv18024 Davidia involucrata HOM05D003727 ORTHO05D004731 1.7e-115 419.9 239 85.4
CDE01G0062 Ceratophyllum demersum HOM05D003727 ORTHO05D004731 4.9e-115 418.3 289 72.3
SMO115G0066 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 5.4e-114 414.8 288 68.8
SEGI_06820 Sequoiadendron giganteum HOM05D003727 ORTHO05D004731 7.1e-114 414.5 288 69.4
Pp3c15_8270 Physcomitrium patens HOM05D003727 ORTHO05D004731 1.6e-113 413.3 290 70.0
unitig_8.g2888 Utricularia gibba HOM05D003727 ORTHO05D004731 1.6e-113 413.3 283 71.0
Mapoly0183s0013 Marchantia polymorpha HOM05D003727 ORTHO05D004731 2.7e-113 412.5 287 70.0
unitig_747.g21103 Utricularia gibba HOM05D003727 ORTHO05D004731 2.7e-113 412.5 284 72.5
Glyma.13G119800 Glycine max HOM05D003727 ORTHO05D004731 7.8e-113 411.0 275 75.3
ECA246G0694 Erigeron canadensis HOM05D003727 ORTHO05D004731 1.3e-112 410.2 288 71.2
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis HOM05D003727 ORTHO05D004731 2.3e-112 409.5 288 68.8
SHI00051 Sapria himalayana HOM05D003727 ORTHO05D004731 8.7e-112 407.5 308 70.5
Pp3c9_2880 Physcomitrium patens HOM05D003727 ORTHO05D004731 3.3e-111 405.6 288 68.1
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 9.9e-108 394.0 240 80.8
Cre05.g241750 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 1.9e-106 389.8 290 67.2
CBR_g238 Chara braunii HOM05D003727 ORTHO05D004731 9.3e-106 387.5 292 65.4
MCO15G342 Micromonas commoda HOM05D003727 ORTHO05D004731 3.3e-95 352.4 305 58.4
Dinv29512 Davidia involucrata HOM05D003727 ORTHO05D004731 4.3e-95 352.1 195 86.2
SGA_v2.0_scaffold64G22028 Striga asiatica HOM05D003727 ORTHO05D004731 7.4e-95 351.3 205 83.9
AUR62029978 Chenopodium quinoa HOM05D003727 ORTHO05D004731 6.5e-91 338.2 196 83.2
CSS0050306 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 8.4e-91 337.8 195 81.5
SMO367G0119 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 4.6e-89 332.0 285 57.2
Cc00_g15630 Coffea canephora HOM05D003727 ORTHO05D004731 1.8e-88 330.1 273 63.4
Cre06.g278451 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 1.1e-87 327.4 289 57.1
MELO3C003205.2 Cucumis melo HOM05D003727 ORTHO05D004731 3.3e-87 325.9 196 80.1
PRCOL_00006564 Prasinoderma coloniale HOM05D003727 ORTHO05D004731 1.8e-85 320.1 321 53.0
MELO3C006749.2 Cucumis melo HOM05D003727 ORTHO05D004731 5.9e-84 315.1 195 76.9
MD16G1136800 Malus domestica HOM05D003727 ORTHO05D004731 1.1e-82 310.8 177 84.2
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea HOM05D003727 ORTHO05D004731 5.7e-79 298.5 197 70.6
Zm00001eb394190 Zea mays HOM05D003727 ORTHO05D004731 2.2e-78 296.6 196 74.0
vmacro06806 Vaccinium macrocarpon HOM05D003727 ORTHO05D426773 2.2e-59 233.4 262 52.7
FAN07G0809 Fragaria x ananassa HOM05D003727 ORTHO05D004731 9.8e-47 191.4 116 79.3
Zm00001eb392210 Zea mays HOM05D003727 ORTHO05D444991 5.5e-42 175.6 120 71.7
Zm00001eb394790 Zea mays HOM05D003727 ORTHO05D441672 2.1e-41 173.7 148 63.5
Zm00001eb400710 Zea mays HOM05D003727 ORTHO05D445430 1.4e-40 171.0 120 70.0
Glyma.14G127500 Glycine max HOM05D003727 ORTHO05D004731 1.8e-40 170.6 113 77.0
PRCOL_00002805 Prasinoderma coloniale HOM05D003727 ORTHO05D034196 1.7e-35 154.1 301 32.6
Lsat_1_v5_gn_5_23680 Lactuca sativa HOM05D003727 ORTHO05D231959 6.6e-35 152.1 115 63.5
Cfa027032 Carpinus fangiana HOM05D003727 ORTHO05D122316 7.5e-31 138.7 297 30.6
Cre06.g252300 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D034196 6.4e-30 135.6 375 26.9
BcaC08g45280 Brassica carinata HOM05D003727 ORTHO05D004731 3.5e-28 129.8 89 71.9
Cfa023761 Carpinus fangiana HOM05D003727 ORTHO05D034196 5.6e-26 122.5 337 24.9
VMungo0251G3273 Vigna mungo HOM05D003727 ORTHO05D000132 1.8e-08 64.3 46 69.6


User provided reference genes

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