Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu037610.2 Olea europaea HOM05D004380 ORTHO05D005134 2.5e-186 655.6 406 100.0
Oeu045705.2 Olea europaea HOM05D004380 ORTHO05D005134 2.9e-86 323.2 415 60.2
Migut.J01084 Erythranthe guttata HOM05D004380 ORTHO05D005134 3.3e-69 266.5 409 47.4
Cc01_g02120 Coffea canephora HOM05D004380 ORTHO05D005134 1.5e-66 257.7 456 50.0
vmacro14143 Vaccinium macrocarpon HOM05D004380 ORTHO05D005134 1.2e-60 238.0 404 50.5
Rhsim07G0121900 Rhododendron simsii HOM05D004380 ORTHO05D005134 1.4e-59 234.6 423 49.6
Cfa012380 Carpinus fangiana HOM05D004380 ORTHO05D005134 7.5e-58 228.8 414 46.6
QL03p017813 Quercus lobata HOM05D004380 ORTHO05D005134 1.3e-57 228.0 414 50.7
Actinidia10879 Actinidia chinensis HOM05D004380 ORTHO05D005134 2.2e-57 227.3 433 48.3
Peaxi162Scf01164g00006 Petunia axillaris HOM05D004380 ORTHO05D005134 2.2e-57 227.3 488 47.1
CiPaw.11G087400 Carya illinoinensis HOM05D004380 ORTHO05D005134 6.4e-57 225.7 411 43.3
SGA_v2.0_scaffold86G26890 Striga asiatica HOM05D004380 ORTHO05D005134 5.4e-56 222.6 403 45.4
GSVIVG01013206001 Vitis vinifera HOM05D004380 ORTHO05D005134 1.6e-55 221.1 416 47.6
ClCG03G011240 Citrullus lanatus HOM05D004380 ORTHO05D005134 4.6e-55 219.5 448 38.2
SGA_v2.0_scaffold20G09254 Striga asiatica HOM05D003893 ORTHO05D005167 2.3e-54 217.2 406 42.1
Haze_08305 Corylus avellana HOM05D004380 ORTHO05D005134 1.9e-53 214.2 425 50.1
CAN.G1336.5 Capsicum annuum HOM05D004380 ORTHO05D005134 3.3e-53 213.4 434 47.7
THA.LOC104814403 Tarenaya hassleriana HOM05D004380 ORTHO05D005134 7.3e-53 212.2 442 44.8
HanXRQChr16g0500491 Helianthus annuus HOM05D004380 ORTHO05D005134 9.5e-53 211.8 413 40.9
Cpa.g.sc69.34 Carica papaya HOM05D004380 ORTHO05D005134 1.6e-52 211.1 432 39.1
Lsat_1_v5_gn_6_63641 Lactuca sativa HOM05D004380 ORTHO05D005134 4.7e-52 209.5 414 42.0
Potri.003G087200 Populus trichocarpa HOM05D004380 ORTHO05D005134 6.2e-52 209.1 434 48.4
TWI81G0890 Tripterygium wilfordii HOM05D004380 ORTHO05D005134 1.4e-51 208.0 488 38.3
Sed0018208 Sechium edule HOM05D004380 ORTHO05D005134 4.0e-51 206.5 446 37.9
Haze_08308 Corylus avellana HOM05D004380 ORTHO05D005134 6.8e-51 205.7 417 50.4
CsaV3_2G035720 Cucumis sativus L. HOM05D004380 ORTHO05D005134 2.9e-49 200.3 444 37.6
MELO3C024775.2 Cucumis melo HOM05D004380 ORTHO05D005134 4.9e-49 199.5 445 37.8
PGSC0003DMG400022576 Solanum tuberosum HOM05D004380 ORTHO05D005134 1.1e-48 198.4 457 43.8
HanXRQChr12g0372541 Helianthus annuus HOM05D004380 ORTHO05D005134 1.9e-48 197.6 414 39.9
Manes.15G172200 Manihot esculenta HOM05D004380 ORTHO05D005134 1.9e-48 197.6 505 39.2
unitig_21.g20505 Utricularia gibba HOM05D004380 ORTHO05D005134 1.9e-48 197.6 419 43.9
Nitab4.5_0005084g0010 Nicotiana tabacum HOM05D004380 ORTHO05D005134 4.1e-48 196.4 415 46.5
DCAR_015696 Daucus carota HOM05D004380 ORTHO05D005134 7.0e-48 195.7 451 40.8
Prupe.8G202500 Prunus persica HOM05D004380 ORTHO05D005134 1.6e-47 194.5 399 40.1
Duzib128G0331 Durio zibethinus HOM05D004380 ORTHO05D005134 2.1e-47 194.1 419 38.7
ECA233G1538 Erigeron canadensis HOM05D004380 ORTHO05D005134 7.8e-47 192.2 413 46.0
MD16G1006500 Malus domestica HOM05D004380 ORTHO05D005134 1.7e-46 191.0 412 40.0
AT1G31870 Arabidopsis thaliana HOM05D004380 ORTHO05D005134 3.9e-46 189.9 454 42.5
Dinv25182 Davidia involucrata HOM05D004380 ORTHO05D005134 3.9e-46 189.9 373 44.5
arahy.Tifrunner.gnm1.ann1.522STQ Arachis hypogaea HOM05D004380 ORTHO05D005134 5.1e-46 189.5 411 42.6
Solyc03g033950.4 Solanum lycopersicum HOM05D004380 ORTHO05D005134 6.6e-46 189.1 412 44.2
Thecc.05G299600 Theobroma cacao HOM05D004380 ORTHO05D005134 6.6e-46 189.1 425 44.2
Sabra03G0056900 Salix brachista HOM05D004380 ORTHO05D005134 8.6e-46 188.7 439 47.2
Hma1.2p1_0311F.1_g121260 Hydrangea macrophylla HOM05D004380 ORTHO05D005134 1.1e-45 188.3 345 51.6
Medtr8g030840 Medicago truncatula HOM05D004380 ORTHO05D005134 1.9e-45 187.6 427 39.3
Gorai.007G293700 Gossypium raimondii HOM05D004380 ORTHO05D005134 2.5e-45 187.2 491 38.7
Aa31LG9G15640 Aethionema arabicum HOM05D004380 ORTHO05D005134 3.3e-45 186.8 417 40.8
Lalb_Chr04g0258181 Lupinus albus HOM05D004380 ORTHO05D005134 2.8e-44 183.7 451 38.1
Thhalv10007193m.g Eutrema salsugineum HOM05D004380 ORTHO05D005134 4.7e-44 183.0 450 43.6
Atru.chr1.3775 Acer truncatum HOM05D004380 ORTHO05D005134 3.1e-43 180.3 365 46.3
arahy.Tifrunner.gnm1.ann1.MX4EXC Arachis hypogaea HOM05D004380 ORTHO05D005134 6.8e-43 179.1 367 39.8
AL1G45970 Arabidopsis lyrata HOM05D004380 ORTHO05D005134 1.2e-42 178.3 450 43.8
Nitab4.5_0008421g0010 Nicotiana tabacum HOM05D004380 ORTHO05D005134 2.0e-42 177.6 409 46.0
Phvul.010G098800 Phaseolus vulgaris HOM05D004380 ORTHO05D005134 1.3e-41 174.9 448 38.8
Sc22g0001370 Simmondsia chinensis HOM05D004380 ORTHO05D005134 1.7e-41 174.5 481 42.8
Gohir.A11G262400 Gossypium hirsutum HOM05D004380 ORTHO05D005134 2.2e-41 174.1 492 37.4
Gohir.D11G272400 Gossypium hirsutum HOM05D004380 ORTHO05D005134 2.9e-41 173.7 477 36.5
Ah.09g224390 Amaranthus hybridus HOM05D004380 ORTHO05D005134 4.9e-41 172.9 447 44.1
Psat4g154840 Pisum sativum HOM05D004380 ORTHO05D005134 4.9e-41 172.9 454 36.3
Glyma.07G070900 Glycine max HOM05D004380 ORTHO05D005134 1.2e-39 168.3 443 37.0
CARHR031210 Cardamine hirsuta HOM05D004380 ORTHO05D005134 1.6e-39 167.9 446 42.8
Carub.0001s3020 Capsella rubella HOM05D004380 ORTHO05D005134 2.7e-39 167.2 482 37.8
VMungo0331G0855 Vigna mungo HOM05D004380 ORTHO05D005134 1.7e-38 164.5 436 40.4
Lj3g0000626 Lotus japonicus HOM05D004380 ORTHO05D005134 3.9e-38 163.3 410 44.6
Lj6C290G5 Lonicera japonica HOM05D004380 ORTHO05D005134 5.1e-38 162.9 462 40.7
CANSAT21G1629 Cannabis sativa HOM05D004380 ORTHO05D005134 3.3e-37 160.2 404 39.6
CSS0014122 Camellia sinensis var. sinensis HOM05D004380 ORTHO05D005134 7.3e-37 159.1 376 43.9
CSS0026269 Camellia sinensis var. sinensis HOM05D004380 ORTHO05D005134 7.3e-37 159.1 376 43.9
BcaB03g13784 Brassica carinata HOM05D004380 ORTHO05D005134 9.5e-37 158.7 442 42.1
RcHm_v2.0_Chr4g0446311 Rosa chinensis HOM05D004380 ORTHO05D005134 2.1e-36 157.5 411 40.6
AUR62007222 Chenopodium quinoa HOM05D004380 ORTHO05D005134 2.8e-36 157.1 458 41.0
CDE02G1296 Ceratophyllum demersum HOM05D004380 ORTHO05D005134 3.6e-36 156.8 458 37.1
PSO782G4920 Papaver somniferum HOM05D004380 ORTHO05D005134 4.7e-36 156.4 421 42.3
Nn6g33684 Nelumbo nucifera HOM05D004380 ORTHO05D005134 6.2e-36 156.0 535 39.4
TAR629G2821 Trochodendron aralioides HOM05D004380 ORTHO05D005134 1.8e-35 154.5 397 39.0
FvH4_4g36560 Fragaria vesca HOM05D004380 ORTHO05D005134 3.1e-35 153.7 413 38.7
FAN12G0331 Fragaria x ananassa HOM05D004380 ORTHO05D005134 3.1e-35 153.7 413 38.7
PSO063G6462 Papaver somniferum HOM05D004380 ORTHO05D005134 3.1e-35 153.7 417 41.0
C05p39530 Brassica napus HOM05D004380 ORTHO05D005134 5.2e-35 152.9 429 40.8
BcaC05g27949 Brassica carinata HOM05D004380 ORTHO05D005134 1.2e-34 151.8 429 41.5
Sopen03g006700 Solanum pennellii HOM05D004380 ORTHO05D005134 1.2e-34 151.8 388 42.0
BolC5t32694H Brassica oleracea HOM05D004380 ORTHO05D005134 1.5e-34 151.4 442 41.4
FAN22G0510 Fragaria x ananassa HOM05D004380 ORTHO05D005134 1.5e-34 151.4 412 41.3
PSO832G0693 Papaver somniferum HOM05D004380 ORTHO05D005134 1.5e-34 151.4 413 44.1
FAN07G2732 Fragaria x ananassa HOM05D004380 ORTHO05D005134 2.0e-34 151.0 414 42.5
FAN17G2609 Fragaria x ananassa HOM05D004380 ORTHO05D005134 5.8e-34 149.4 411 41.6
A05p25450 Brassica napus HOM05D004380 ORTHO05D005134 1.7e-33 147.9 443 39.1
AUR62018778 Chenopodium quinoa HOM05D004380 ORTHO05D005134 2.9e-33 147.1 395 43.5
CiPaw.04G096200 Carya illinoinensis HOM05D004380 ORTHO05D005134 4.9e-33 146.4 405 34.1
BraA05t21429Z Brassica rapa HOM05D004380 ORTHO05D005134 8.4e-33 145.6 441 37.9
Ca_23634_v3 Cicer arietinum L. HOM05D000346 ORTHO05D000326 8.4e-33 145.6 361 40.7
Ciclev10033653m.g Citrus clementina HOM05D004380 ORTHO05D005134 3.6e-28 130.2 437 39.4
COL.COLO4_13527 Corchorus olitorius HOM05D004380 ORTHO05D005134 3.1e-27 127.1 103 63.1
Aqoxy3G00393 Aquilegia oxysepala HOM05D004380 ORTHO05D005134 1.5e-26 124.8 446 40.8
EL10Ac4g09041 Beta vulgaris HOM05D004380 ORTHO05D005134 2.0e-26 124.4 421 41.8
THA.LOC104812727 Tarenaya hassleriana HOM05D004380 ORTHO05D005134 3.4e-26 123.6 195 46.7
Haze_13061 Corylus avellana HOM05D000001 ORTHO05D010365 1.4e-24 118.2 128 61.7
Sp1g27590 Schrenkiella parvula HOM05D004380 ORTHO05D005134 7.1e-24 115.9 377 39.0
CAN.G1823.5 Capsicum annuum HOM05D004380 ORTHO05D005134 9.3e-24 115.5 106 62.3
Hund11272 Selenicereus undatus HOM05D004380 ORTHO05D005134 1.6e-23 114.8 118 64.4
SHI10270 Sapria himalayana HOM05D004380 ORTHO05D005134 1.3e-22 111.7 269 38.7
Lsat_1_v5_gn_3_2421 Lactuca sativa HOM05D004380 ORTHO05D005134 2.3e-22 110.9 170 50.6
QL12p007207 Quercus lobata HOM05D004380 ORTHO05D005134 2.3e-22 110.9 163 50.9
arahy.Tifrunner.gnm1.ann1.ARJY2C Arachis hypogaea HOM05D004380 ORTHO05D005134 6.6e-22 109.4 150 47.3
CAN.G1186.1 Capsicum annuum HOM05D004380 ORTHO05D005134 3.3e-21 107.1 105 61.0
Os08g0178300 Oryza sativa ssp. japonica HOM05D004380 ORTHO05D005134 5.6e-21 106.3 447 34.5
ATR0665G406 Amborella trichopoda HOM05D004380 ORTHO05D005134 1.2e-18 98.6 496 35.1
CDE11G0710 Ceratophyllum demersum HOM05D004380 ORTHO05D005134 3.4e-18 97.1 401 30.2
Zm00001eb400590 Zea mays HOM05D004380 ORTHO05D005134 8.4e-17 92.4 151 39.7
CAN.G248.21 Capsicum annuum HOM05D004380 ORTHO05D005134 9.3e-16 89.0 94 50.0
HPP92_020129 Vanilla planifolia HOM05D004380 ORTHO05D005134 2.3e-14 84.3 130 42.3
Lj2C247T7 Lonicera japonica HOM05D004380 ORTHO05D005134 5.1e-14 83.2 67 68.7
Actinidia31472 Actinidia chinensis HOM05D004380 ORTHO05D005134 1.5e-13 81.6 230 36.1
SEGI_39298 Sequoiadendron giganteum HOM05D004380 ORTHO05D005134 3.3e-13 80.5 489 27.6
TPR.G11131 Trifolium pratense HOM05D004380 ORTHO05D005134 2.1e-12 77.8 160 34.4
SMO118G0163 Selaginella moellendorffii HOM05D004380 ORTHO05D005134 1.8e-11 74.7 98 42.9
SMO144G0180 Selaginella moellendorffii HOM05D004380 ORTHO05D005134 1.8e-11 74.7 98 42.9
arahy.Tifrunner.gnm1.ann1.I1PL9V Arachis hypogaea HOM05D004380 ORTHO05D005134 4.0e-11 73.6 56 67.9
Potri.001G147100 Populus trichocarpa HOM05D004380 ORTHO05D005134 4.0e-11 73.6 353 27.2
AagrBONN_evm.TU.Sc2ySwM_117.3835 Anthoceros agrestis HOM05D004380 ORTHO05D005134 4.5e-10 70.1 105 43.8
CARHR062710 Cardamine hirsuta HOM05D004380 ORTHO05D005134 7.6e-10 69.3 55 67.3
Phvul.011G076400 Phaseolus vulgaris HOM05D004380 ORTHO05D005134 1.3e-09 68.6 50 68.0
Mapoly0062s0011 Marchantia polymorpha HOM05D004380 ORTHO05D005134 4.9e-09 66.6 92 47.8
Pp3c3_10050 Physcomitrium patens HOM05D004380 ORTHO05D005134 4.9e-09 66.6 157 31.8
TPR.G22617 Trifolium pratense HOM05D004380 ORTHO05D005134 1.4e-08 65.1 68 51.5
arahy.Tifrunner.gnm1.ann1.45D7QY Arachis hypogaea HOM05D004380 ORTHO05D005134 5.5e-08 63.2 48 70.8
CBR_g26347 Chara braunii HOM05D004380 ORTHO05D005134 1.2e-07 62.0 68 44.1
TPR.G17657 Trifolium pratense HOM05D004380 ORTHO05D005134 1.6e-07 61.6 104 36.5
vmacro21374 Vaccinium macrocarpon HOM05D000230 ORTHO05D011064 1.0e-06 58.9 42 66.7
Sed0024296 Sechium edule HOM05D004380 ORTHO05D005134 3.0e-06 57.4 81 49.4


User provided reference genes

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