Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu037537.3 Olea europaea HOM05D005183 ORTHO05D006684 3.4e-121 438.3 221 100.0
Oeu040539.1 Olea europaea HOM05D005183 ORTHO05D006684 4.5e-81 305.1 230 72.6
Oeu013577.1 Olea europaea HOM05D005183 ORTHO05D006684 5.1e-77 291.6 230 69.6
Dinv19828 Davidia involucrata HOM05D005183 ORTHO05D006684 2.4e-74 282.7 230 66.5
MSTRG.5807 Avicennia marina HOM05D005183 ORTHO05D006684 2.0e-73 279.6 231 67.5
PGSC0003DMG400028174 Solanum tuberosum HOM05D005183 ORTHO05D006684 1.0e-72 277.3 232 64.7
Actinidia10400 Actinidia chinensis HOM05D005183 ORTHO05D006684 5.0e-72 275.0 228 64.9
Nn4g24833 Nelumbo nucifera HOM05D005183 ORTHO05D006684 5.0e-72 275.0 230 63.9
Nitab4.5_0005311g0010 Nicotiana tabacum HOM05D005183 ORTHO05D006684 6.5e-72 274.6 232 64.2
Nitab4.5_0002715g0140 Nicotiana tabacum HOM05D005183 ORTHO05D006684 1.1e-71 273.9 232 64.2
Solyc10g083600.2 Solanum lycopersicum HOM05D005183 ORTHO05D006684 1.4e-71 273.5 232 63.8
Peaxi162Scf00110g02022 Petunia axillaris HOM05D005183 ORTHO05D006684 1.9e-71 273.1 230 63.9
Hma1.2p1_0611F.1_g188660 Hydrangea macrophylla HOM05D005183 ORTHO05D006684 3.2e-71 272.3 230 63.0
Nn2g14627 Nelumbo nucifera HOM05D005183 ORTHO05D006684 3.2e-71 272.3 230 63.0
CSS0041546 Camellia sinensis var. sinensis HOM05D005183 ORTHO05D006684 4.2e-71 271.9 214 65.9
CAN.G1138.15 Capsicum annuum HOM05D005183 ORTHO05D006684 5.5e-71 271.6 214 65.4
Lsat_1_v5_gn_4_35140 Lactuca sativa HOM05D005183 ORTHO05D006684 9.4e-71 270.8 211 67.3
Sopen10g033080 Solanum pennellii HOM05D005183 ORTHO05D006684 1.2e-70 270.4 232 63.4
SGA_v2.0_scaffold75G24795 Striga asiatica HOM05D005183 ORTHO05D006684 1.6e-70 270.0 230 63.0
Migut.J00983 Erythranthe guttata HOM05D005183 ORTHO05D006684 2.1e-70 269.6 230 63.9
Thecc.05G081000 Theobroma cacao HOM05D005183 ORTHO05D006684 2.1e-70 269.6 311 51.1
DCAR_029401 Daucus carota HOM05D005183 ORTHO05D006684 3.6e-70 268.9 230 62.6
Migut.N00918 Erythranthe guttata HOM05D005183 ORTHO05D006684 3.6e-70 268.9 230 64.3
GSVIVG01033782001 Vitis vinifera HOM05D005183 ORTHO05D006684 4.7e-70 268.5 230 63.0
DCAR_010653 Daucus carota HOM05D005183 ORTHO05D006684 6.1e-70 268.1 230 61.7
SGA_v2.0_scaffold40G15402 Striga asiatica HOM05D005183 ORTHO05D006684 6.1e-70 268.1 230 62.6
Cc09_g05380 Coffea canephora HOM05D005183 ORTHO05D006684 1.4e-69 266.9 230 61.3
ClCG10G019350 Citrullus lanatus HOM05D005183 ORTHO05D006684 1.5e-68 263.5 214 65.0
ECA233G2114 Erigeron canadensis HOM05D005183 ORTHO05D006684 2.0e-68 263.1 214 64.5
Ciclev10028864m.g Citrus clementina HOM05D005183 ORTHO05D006684 2.6e-68 262.7 230 61.3
Gorai.002G242600 Gossypium raimondii HOM05D005183 ORTHO05D006684 2.6e-68 262.7 229 62.0
Duzib128G1222 Durio zibethinus HOM05D005183 ORTHO05D006684 3.3e-68 262.3 229 61.1
unitig_0.g1556 Utricularia gibba HOM05D005183 ORTHO05D006684 4.4e-68 261.9 228 60.5
COL.COLO4_29815 Corchorus olitorius HOM05D005183 ORTHO05D006684 5.7e-68 261.5 229 62.0
Gohir.A01G209300 Gossypium hirsutum HOM05D005183 ORTHO05D006684 5.7e-68 261.5 229 61.1
Gohir.D01G198400 Gossypium hirsutum HOM05D005183 ORTHO05D006684 9.7e-68 260.8 229 61.1
Ca_06436_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 1.3e-67 260.4 223 60.1
Sc20g0006050 Simmondsia chinensis HOM05D005183 ORTHO05D006684 1.3e-67 260.4 214 63.6
TAR371G0749 Trochodendron aralioides HOM05D005183 ORTHO05D006684 1.7e-67 260.0 230 61.7
Lalb_Chr06g0173361 Lupinus albus HOM05D005183 ORTHO05D006684 2.2e-67 259.6 227 59.9
TPR.G5686 Trifolium pratense HOM05D005183 ORTHO05D006684 3.7e-67 258.8 222 59.9
PGR004G1465 Punica granatum HOM05D005183 ORTHO05D006684 4.8e-67 258.5 213 62.0
Aqoxy2G03309 Aquilegia oxysepala HOM05D005183 ORTHO05D006684 8.2e-67 257.7 214 62.6
CiPaw.09G008700 Carya illinoinensis HOM05D005183 ORTHO05D006684 8.2e-67 257.7 229 60.7
Eucgr.A01543 Eucalyptus grandis HOM05D005183 ORTHO05D006684 8.2e-67 257.7 229 60.3
Nitab4.5_0000132g0170 Nicotiana tabacum HOM05D005183 ORTHO05D006684 8.2e-67 257.7 221 63.3
Lj3A998T32 Lonicera japonica HOM05D005183 ORTHO05D006684 1.8e-66 256.5 231 61.9
TPR.G28986 Trifolium pratense HOM05D005183 ORTHO05D006684 2.4e-66 256.1 220 60.0
Manes.08G020900 Manihot esculenta HOM05D005183 ORTHO05D006684 3.1e-66 255.8 213 62.0
Sed0001030 Sechium edule HOM05D005183 ORTHO05D006684 3.1e-66 255.8 214 61.7
Hund27408 Selenicereus undatus HOM05D005183 ORTHO05D006684 3.1e-66 255.8 229 60.3
THA.LOC104808666 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 4.1e-66 255.4 230 59.1
vmacro17863 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 5.3e-66 255.0 241 58.5
MELO3C018272.2 Cucumis melo HOM05D005183 ORTHO05D006684 2.6e-65 252.7 214 61.7
Psat6g078200 Pisum sativum HOM05D005183 ORTHO05D006684 3.5e-65 252.3 231 57.1
CsaV3_3G036840 Cucumis sativus L. HOM05D005183 ORTHO05D006684 5.9e-65 251.5 214 61.7
VMungo0720G1906 Vigna mungo HOM05D005183 ORTHO05D006684 5.9e-65 251.5 224 60.7
Glyma.10G066200 Glycine max HOM05D005183 ORTHO05D006684 1.0e-64 250.8 230 59.6
Glyma.13G151300 Glycine max HOM05D005183 ORTHO05D006684 1.3e-64 250.4 230 59.6
Lj5g0003294 Lotus japonicus HOM05D005183 ORTHO05D006684 1.3e-64 250.4 230 58.3
Ah.09g233440 Amaranthus hybridus HOM05D005183 ORTHO05D006684 1.7e-64 250.0 225 57.8
Atru.chr8.1634 Acer truncatum HOM05D005183 ORTHO05D006684 2.2e-64 249.6 230 57.4
Potri.015G088700 Populus trichocarpa HOM05D005183 ORTHO05D006684 2.9e-64 249.2 214 61.2
Cfa016373 Carpinus fangiana HOM05D005183 ORTHO05D006684 3.8e-64 248.8 215 61.9
HanXRQChr02g0051911 Helianthus annuus HOM05D005183 ORTHO05D006684 3.8e-64 248.8 231 59.7
Hund17099 Selenicereus undatus HOM05D005183 ORTHO05D006684 5.0e-64 248.4 213 61.5
HanXRQChr17g0545251 Helianthus annuus HOM05D005183 ORTHO05D006684 6.5e-64 248.1 230 59.1
Medtr1g061160 Medicago truncatula HOM05D005183 ORTHO05D006684 8.5e-64 247.7 213 59.6
QL07p040540 Quercus lobata HOM05D005183 ORTHO05D006684 8.5e-64 247.7 230 59.6
AUR62013753 Chenopodium quinoa HOM05D005183 ORTHO05D006684 1.1e-63 247.3 230 58.3
AUR62023398 Chenopodium quinoa HOM05D005183 ORTHO05D006684 1.1e-63 247.3 230 58.3
Cpa.g.sc111.25 Carica papaya HOM05D005183 ORTHO05D006684 1.5e-63 246.9 213 61.0
EL10Ac1g00750 Beta vulgaris HOM05D005183 ORTHO05D006684 2.5e-63 246.1 229 58.1
CDE08G0191 Ceratophyllum demersum HOM05D005183 ORTHO05D006684 2.5e-63 246.1 226 58.0
Sabra15G0111600 Salix brachista HOM05D005183 ORTHO05D006684 2.5e-63 246.1 230 57.4
Phvul.007G223300 Phaseolus vulgaris HOM05D005183 ORTHO05D006684 7.2e-63 244.6 230 57.0
Cfa008157 Carpinus fangiana HOM05D005183 ORTHO05D006684 9.4e-63 244.2 215 61.4
Lalb_Chr02g0155161 Lupinus albus HOM05D005183 ORTHO05D006684 6.1e-62 241.5 218 59.2
TWI74G1514 Tripterygium wilfordii HOM05D005183 ORTHO05D006684 6.1e-62 241.5 293 47.4
Aa31LG8G10050 Aethionema arabicum HOM05D005183 ORTHO05D006684 3.0e-61 239.2 230 53.0
Ca_28565_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 6.7e-61 238.0 205 60.5
Zm00001eb255650 Zea mays HOM05D005183 ORTHO05D006684 6.7e-61 238.0 214 57.9
Haze_00122 Corylus avellana HOM05D005183 ORTHO05D006684 2.0e-60 236.5 242 55.8
ATR0559G171 Amborella trichopoda HOM05D005183 ORTHO05D006684 2.6e-60 236.1 213 59.2
Zm00001eb292270 Zea mays HOM05D005183 ORTHO05D006684 4.4e-60 235.3 214 57.5
BcaC06g35547 Brassica carinata HOM05D005183 ORTHO05D006684 7.5e-60 234.6 214 55.1
BolC7t41857H Brassica oleracea HOM05D005183 ORTHO05D006684 7.5e-60 234.6 214 55.1
Carub.0003s2385 Capsella rubella HOM05D005183 ORTHO05D006684 1.7e-59 233.4 213 55.9
A07p08780 Brassica napus HOM05D005183 ORTHO05D006684 6.3e-59 231.5 214 54.7
C07p13620 Brassica napus HOM05D005183 ORTHO05D006684 6.3e-59 231.5 214 54.7
BraA07t28669Z Brassica rapa HOM05D005183 ORTHO05D006684 6.3e-59 231.5 214 54.7
Os01g0513800 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 6.3e-59 231.5 227 55.1
Sp3g21310 Schrenkiella parvula HOM05D005183 ORTHO05D006684 1.1e-58 230.7 231 52.8
PSO017G1745 Papaver somniferum HOM05D005183 ORTHO05D006684 1.4e-58 230.3 214 56.5
PSO478G0399 Papaver somniferum HOM05D005183 ORTHO05D006684 1.4e-58 230.3 214 56.5
HPP92_017999 Vanilla planifolia HOM05D005183 ORTHO05D006684 1.8e-58 229.9 210 56.2
Prupe.7G117100 Prunus persica HOM05D005183 ORTHO05D006684 3.1e-58 229.2 233 54.1
HPP92_026689 Vanilla planifolia HOM05D005183 ORTHO05D006684 3.1e-58 229.2 225 53.8
CARHR099550 Cardamine hirsuta HOM05D005183 ORTHO05D006684 7.0e-58 228.0 231 53.2
MD14G1016000 Malus domestica HOM05D005183 ORTHO05D006684 9.1e-58 227.6 233 53.6
AT3G23620 Arabidopsis thaliana HOM05D005183 ORTHO05D006684 1.6e-57 226.9 221 55.7
FvH4_6g17900 Fragaria vesca HOM05D005183 ORTHO05D006684 1.6e-57 226.9 242 51.7
FAN02G4090 Fragaria x ananassa HOM05D005183 ORTHO05D006684 1.6e-57 226.9 242 51.7
FAN14G3711 Fragaria x ananassa HOM05D005183 ORTHO05D006684 1.6e-57 226.9 242 51.7
MD12G1018000 Malus domestica HOM05D005183 ORTHO05D006684 1.6e-57 226.9 233 53.2
FAN09G1214 Fragaria x ananassa HOM05D005183 ORTHO05D006684 2.0e-57 226.5 242 51.7
BcaB06g26517 Brassica carinata HOM05D005183 ORTHO05D006684 3.5e-57 225.7 214 53.3
FAN05G1411 Fragaria x ananassa HOM05D005183 ORTHO05D006684 3.5e-57 225.7 242 51.2
SEGI_13997 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 3.5e-57 225.7 252 51.6
SEGI_31815 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 3.5e-57 225.7 250 52.0
AL3G38300 Arabidopsis lyrata HOM05D005183 ORTHO05D006684 4.5e-57 225.3 221 54.8
RcHm_v2.0_Chr3g0472151 Rosa chinensis HOM05D005183 ORTHO05D006684 1.3e-56 223.8 242 51.2
BcaB04g20435 Brassica carinata HOM05D005183 ORTHO05D006684 3.8e-56 222.2 231 51.9
Thhalv10021169m.g Eutrema salsugineum HOM05D005183 ORTHO05D006684 5.0e-56 221.9 231 51.5
C01p40070 Brassica napus HOM05D005183 ORTHO05D006684 8.5e-56 221.1 213 53.1
BolC1t03963H Brassica oleracea HOM05D005183 ORTHO05D006684 8.5e-56 221.1 213 53.1
vmacro00782 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 8.5e-56 221.1 221 57.9
A01p31440 Brassica napus HOM05D005183 ORTHO05D006684 1.5e-55 220.3 213 53.1
BraA01t03270Z Brassica rapa HOM05D005183 ORTHO05D006684 1.5e-55 220.3 213 53.1
THA.LOC104804771 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 3.5e-49 199.1 175 59.4
Actinidia31290 Actinidia chinensis HOM05D005183 ORTHO05D006684 1.3e-48 197.2 216 53.7
Pp3c4_19370 Physcomitrium patens HOM05D005183 ORTHO05D006684 2.2e-48 196.4 245 45.3
Gohir.A01G215950 Gossypium hirsutum HOM05D005183 ORTHO05D006684 6.5e-48 194.9 223 51.1
FAN05G2784 Fragaria x ananassa HOM05D005183 ORTHO05D006684 8.5e-48 194.5 171 58.5
Pp3c26_6490 Physcomitrium patens HOM05D005183 ORTHO05D006684 4.2e-47 192.2 240 43.3
Rhsim11G0063800 Rhododendron simsii HOM05D005183 ORTHO05D006684 9.5e-47 191.0 202 52.5
SMO367G0957 Selaginella moellendorffii HOM05D005183 ORTHO05D006684 5.2e-45 185.3 223 45.3
Mapoly0098s0050 Marchantia polymorpha HOM05D005183 ORTHO05D006684 1.7e-43 180.3 213 46.9
CBR_g32692 Chara braunii HOM05D012618 ORTHO05D006684 1.6e-41 173.7 215 44.7
Haze_19538 Corylus avellana HOM05D005183 ORTHO05D006684 8.6e-40 167.9 250 42.8
AagrBONN_evm.TU.Sc2ySwM_344.5577 Anthoceros agrestis HOM05D005183 ORTHO05D006684 2.8e-38 162.9 226 41.6
Cre03.g197000 Chlamydomonas reinhardtii HOM05D005183 ORTHO05D006684 3.4e-36 156.0 225 40.0
HanXRQChr08g0223931 Helianthus annuus HOM05D005183 ORTHO05D006684 5.9e-33 145.2 157 55.4
MCO10G188 Micromonas commoda HOM05D005183 ORTHO05D006684 4.9e-27 125.6 211 34.1
Ca_11626_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 2.7e-25 119.8 102 61.8
PRCOL_00004600 Prasinoderma coloniale HOM05D005183 ORTHO05D006684 1.8e-21 107.1 199 31.2
TAR371G0095 Trochodendron aralioides HOM05D005183 ORTHO05D045124 4.6e-09 65.9 104 43.3
Dinv21257 Davidia involucrata HOM05D005183 ORTHO05D045124 6.6e-08 62.0 96 45.8


User provided reference genes

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