Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036882.3 Olea europaea HOM05D004097 ORTHO05D005352 0.0e+00 1328.5 656 100.0
Oeu019032.1 Olea europaea HOM05D004097 ORTHO05D005352 1.4e-271 939.5 662 73.7
Lj6C825T6 Lonicera japonica HOM05D004097 ORTHO05D005352 3.4e-233 812.0 676 62.6
MSTRG.7991 Avicennia marina HOM05D004097 ORTHO05D005352 8.3e-232 807.4 663 63.0
QL03p053766 Quercus lobata HOM05D004097 ORTHO05D005352 6.8e-226 787.7 658 61.2
Migut.K00711 Erythranthe guttata HOM05D004097 ORTHO05D005352 1.2e-225 786.9 663 61.5
Cc00_g13540 Coffea canephora HOM05D004097 ORTHO05D005352 9.8e-225 783.9 663 61.5
TWI36G0618 Tripterygium wilfordii HOM05D004097 ORTHO05D005352 2.4e-223 779.2 659 60.1
GSVIVG01010441001 Vitis vinifera HOM05D004097 ORTHO05D005352 9.2e-223 777.3 666 59.6
SalBow2G2696 Salvia bowleyana HOM05D004097 ORTHO05D005352 5.9e-222 774.6 675 60.0
CiPaw.05G112000 Carya illinoinensis HOM05D004097 ORTHO05D005352 1.3e-221 773.5 654 61.0
Cfa009333 Carpinus fangiana HOM05D004097 ORTHO05D005352 2.9e-221 772.3 656 60.8
CSS0021321 Camellia sinensis var. sinensis HOM05D004097 ORTHO05D005352 5.6e-220 768.1 662 59.1
CSS0033535 Camellia sinensis var. sinensis HOM05D004097 ORTHO05D005352 2.8e-219 765.8 662 58.9
Ciclev10030695m.g Citrus clementina HOM05D004097 ORTHO05D005352 1.0e-218 763.8 664 59.5
RcHm_v2.0_Chr4g0430631 Rosa chinensis HOM05D004097 ORTHO05D005352 1.8e-218 763.1 661 58.9
Sopen05g010470 Solanum pennellii HOM05D004097 ORTHO05D005352 1.2e-217 760.4 664 59.6
TWI18G1202 Tripterygium wilfordii HOM05D004097 ORTHO05D005352 2.0e-217 759.6 646 59.9
CAN.G1548.3 Capsicum annuum HOM05D004097 ORTHO05D005352 2.6e-217 759.2 661 59.0
CAN.G311.73 Capsicum annuum HOM05D004097 ORTHO05D005352 2.6e-217 759.2 661 59.0
COL.COLO4_20377 Corchorus olitorius HOM05D004097 ORTHO05D005352 2.6e-217 759.2 663 59.0
Solyc05g015220.3 Solanum lycopersicum HOM05D004097 ORTHO05D005352 2.6e-217 759.2 664 59.5
TAR629G3065 Trochodendron aralioides HOM05D004097 ORTHO05D005352 2.6e-217 759.2 698 57.7
MD13G1116700 Malus domestica HOM05D004097 ORTHO05D005352 5.8e-217 758.1 662 58.8
PGR102G2071 Punica granatum HOM05D004097 ORTHO05D005352 5.8e-217 758.1 663 58.4
CANSAT01G0794 Cannabis sativa HOM05D004097 ORTHO05D005352 8.3e-216 754.2 659 58.7
Duzib251G0245 Durio zibethinus HOM05D004097 ORTHO05D005352 8.3e-216 754.2 665 58.6
FvH4_4g23960 Fragaria vesca HOM05D004097 ORTHO05D005352 8.3e-216 754.2 661 58.9
FAN17G1448 Fragaria x ananassa HOM05D004097 ORTHO05D005352 5.4e-215 751.5 654 58.7
Gohir.D01G154900 Gossypium hirsutum HOM05D004097 ORTHO05D005352 5.4e-215 751.5 665 58.6
Thecc.02G212500 Theobroma cacao HOM05D004097 ORTHO05D005352 5.4e-215 751.5 663 58.4
Gorai.002G191800 Gossypium raimondii HOM05D004097 ORTHO05D005352 1.2e-214 750.4 665 58.5
Peaxi162Scf00128g01140 Petunia axillaris HOM05D004097 ORTHO05D005352 2.0e-214 749.6 664 58.3
Nn4g22358 Nelumbo nucifera HOM05D004097 ORTHO05D005352 3.5e-214 748.8 666 58.6
FAN12G2099 Fragaria x ananassa HOM05D004097 ORTHO05D005352 6.0e-214 748.0 661 58.4
MD16G1117400 Malus domestica HOM05D004097 ORTHO05D005352 7.8e-214 747.7 662 58.3
Gohir.A01G155000 Gossypium hirsutum HOM05D004097 ORTHO05D005352 1.0e-213 747.3 663 58.7
FAN07G0057 Fragaria x ananassa HOM05D004097 ORTHO05D005352 1.3e-213 746.9 661 57.9
Rhsim12G0102000 Rhododendron simsii HOM05D004097 ORTHO05D005352 1.7e-213 746.5 779 52.0
Potri.010G059000 Populus trichocarpa HOM05D004097 ORTHO05D005352 3.0e-213 745.7 652 58.3
Manes.13G018100 Manihot esculenta HOM05D004097 ORTHO05D005352 8.6e-213 744.2 662 58.2
Dinv14824 Davidia involucrata HOM05D004097 ORTHO05D005352 7.3e-212 741.1 616 62.0
Prupe.1G228800 Prunus persica HOM05D004097 ORTHO05D005352 6.2e-211 738.0 662 57.6
Duzib248G1376 Durio zibethinus HOM05D004097 ORTHO05D005352 8.0e-211 737.6 665 57.7
Lj4g0020055 Lotus japonicus HOM05D004097 ORTHO05D005352 5.2e-210 734.9 659 56.8
Hma1.2p1_0668F.1_g200000 Hydrangea macrophylla HOM05D004097 ORTHO05D005352 6.8e-210 734.6 629 59.5
EL10Ac6g13480 Beta vulgaris HOM05D004097 ORTHO05D005352 2.0e-209 733.0 663 57.5
Hund25455 Selenicereus undatus HOM05D004097 ORTHO05D005352 4.4e-209 731.9 662 56.6
HanXRQChr17g0540261 Helianthus annuus HOM05D004097 ORTHO05D005352 9.8e-209 730.7 660 57.6
Eucgr.B03480 Eucalyptus grandis HOM05D004097 ORTHO05D005352 2.2e-208 729.6 624 59.1
Aqoxy5G03417 Aquilegia oxysepala HOM05D004097 ORTHO05D005352 1.1e-207 727.2 628 59.4
ECA246G4064 Erigeron canadensis HOM05D004097 ORTHO05D005352 5.4e-207 724.9 659 57.5
SGA_v2.0_scaffold130G34253 Striga asiatica HOM05D004097 ORTHO05D005352 1.2e-206 723.8 662 58.2
TPR.G17087 Trifolium pratense HOM05D004097 ORTHO05D005352 2.1e-206 723.0 663 55.7
ClCG11G013780 Citrullus lanatus HOM05D004097 ORTHO05D005352 6.6e-205 718.0 663 56.3
CsaV3_5G030370 Cucumis sativus L. HOM05D004097 ORTHO05D005352 6.6e-205 718.0 663 56.1
MELO3C011876.2 Cucumis melo HOM05D004097 ORTHO05D005352 1.5e-204 716.8 663 56.0
Medtr8g080360 Medicago truncatula HOM05D004097 ORTHO05D005352 7.3e-204 714.5 626 56.9
VMungo0251G0768 Vigna mungo HOM05D004097 ORTHO05D005352 7.3e-204 714.5 658 55.3
Sed0007371 Sechium edule HOM05D004097 ORTHO05D005352 9.5e-204 714.1 663 57.5
Psat7g078160 Pisum sativum HOM05D004097 ORTHO05D005352 1.2e-203 713.8 626 57.0
Ca_18044_v3 Cicer arietinum L. HOM05D004097 ORTHO05D005352 1.6e-203 713.4 622 56.9
Actinidia20697 Actinidia chinensis HOM05D004097 ORTHO05D005352 2.3e-202 709.5 613 58.9
Glyma.05G146500 Glycine max HOM05D004097 ORTHO05D005352 2.3e-202 709.5 666 54.5
Sabra10G0046600 Salix brachista HOM05D004097 ORTHO05D005352 6.8e-202 708.0 654 56.6
Phvul.002G174800 Phaseolus vulgaris HOM05D004097 ORTHO05D005352 2.6e-201 706.1 656 54.3
Lalb_Chr13g0294221 Lupinus albus HOM05D004097 ORTHO05D005352 7.5e-201 704.5 664 55.0
arahy.Tifrunner.gnm1.ann1.11CB4V Arachis hypogaea HOM05D004097 ORTHO05D005352 2.2e-200 703.0 659 54.2
PSO017G2193 Papaver somniferum HOM05D004097 ORTHO05D005352 2.2e-200 703.0 661 55.7
PSO478G3686 Papaver somniferum HOM05D004097 ORTHO05D005352 8.3e-200 701.0 661 55.4
THA.LOC104807884 Tarenaya hassleriana HOM05D004097 ORTHO05D005352 1.3e-197 693.7 656 54.0
arahy.Tifrunner.gnm1.ann1.7LT28F Arachis hypogaea HOM05D004097 ORTHO05D005352 2.3e-197 693.0 663 53.5
Carub.0002s1382 Capsella rubella HOM05D004097 ORTHO05D005352 6.6e-197 691.4 664 54.5
Sp5g22470 Schrenkiella parvula HOM05D004097 ORTHO05D005352 1.5e-196 690.3 661 54.3
Glyma.05G146400 Glycine max HOM05D004097 ORTHO05D005352 2.5e-196 689.5 662 53.5
MBI11_g07450_MAGBIO Magnolia biondii HOM05D004097 ORTHO05D005352 2.5e-196 689.5 662 54.5
Lalb_Chr13g0294231 Lupinus albus HOM05D004097 ORTHO05D005352 5.6e-196 688.3 662 53.2
AT1G67490 Arabidopsis thaliana HOM05D004097 ORTHO05D005352 9.5e-196 687.6 661 53.7
C06p38670 Brassica napus HOM05D004097 ORTHO05D005352 6.2e-195 684.9 665 54.6
BraA07t30877Z Brassica rapa HOM05D004097 ORTHO05D005352 4.0e-194 682.2 665 53.8
A07p32530 Brassica napus HOM05D004097 ORTHO05D005352 5.2e-194 681.8 665 53.8
TPR.G17069 Trifolium pratense HOM05D004097 ORTHO05D005352 1.2e-193 680.6 659 52.8
BolC6t38956H Brassica oleracea HOM05D004097 ORTHO05D005352 2.0e-193 679.9 665 53.7
ATR0561G059 Amborella trichopoda HOM05D004097 ORTHO05D005352 5.8e-193 678.3 650 54.0
AL2G26080 Arabidopsis lyrata HOM05D004097 ORTHO05D005352 4.9e-192 675.2 693 51.5
Psat7g078280 Pisum sativum HOM05D004097 ORTHO05D005352 5.4e-191 671.8 666 52.7
Aa31sc781G10 Aethionema arabicum HOM05D004097 ORTHO05D005352 2.1e-190 669.8 679 53.2
Lsat_1_v5_gn_3_29780 Lactuca sativa HOM05D004097 ORTHO05D005352 1.5e-188 663.7 662 53.5
Medtr8g080290 Medicago truncatula HOM05D004097 ORTHO05D005352 2.5e-188 662.9 657 51.9
Ah.02g130710 Amaranthus hybridus HOM05D004097 ORTHO05D005352 4.3e-188 662.1 659 52.2
Thhalv10018104m.g Eutrema salsugineum HOM05D004097 ORTHO05D005352 1.4e-186 657.1 700 50.9
AUR62005598 Chenopodium quinoa HOM05D004097 ORTHO05D005352 2.4e-186 656.4 678 51.3
Os01g0921200 Oryza sativa ssp. japonica HOM05D004097 ORTHO05D005352 9.0e-186 654.4 627 52.6
HPP92_023192 Vanilla planifolia HOM05D004097 ORTHO05D005352 2.6e-185 652.9 622 53.5
Zm00001eb143210 Zea mays HOM05D004097 ORTHO05D005352 1.3e-184 650.6 629 53.3
CARHR026770 Cardamine hirsuta HOM05D004097 ORTHO05D005352 8.4e-184 647.9 658 51.8
AL1G40600 Arabidopsis lyrata HOM05D004097 ORTHO05D005352 5.1e-181 638.6 663 51.3
Thhalv10006835m.g Eutrema salsugineum HOM05D004097 ORTHO05D005352 5.1e-181 638.6 662 51.1
Sp1g23450 Schrenkiella parvula HOM05D004097 ORTHO05D005352 3.3e-180 636.0 660 51.2
BcaC06g35272 Brassica carinata HOM05D004097 ORTHO05D005352 1.3e-179 634.0 661 50.7
AT1G24320 Arabidopsis thaliana HOM05D004097 ORTHO05D005352 2.8e-179 632.9 658 51.5
C07p17980 Brassica napus HOM05D004097 ORTHO05D005352 1.1e-178 630.9 661 50.7
BcaB03g13996 Brassica carinata HOM05D004097 ORTHO05D005352 2.4e-178 629.8 663 50.7
DCAR_031191 Daucus carota HOM05D004097 ORTHO05D005352 2.4e-178 629.8 657 51.9
PSO675G1898 Papaver somniferum HOM05D004097 ORTHO05D005352 9.9e-177 624.4 662 51.2
BolC7t42308H Brassica oleracea HOM05D004097 ORTHO05D005352 2.2e-176 623.2 656 50.6
Nitab4.5_0005179g0010 Nicotiana tabacum HOM05D004097 ORTHO05D005352 4.6e-174 615.5 664 50.8
A07p12040 Brassica napus HOM05D004097 ORTHO05D005352 6.0e-174 615.1 694 48.3
AUR62024129 Chenopodium quinoa HOM05D004097 ORTHO05D005352 6.0e-174 615.1 629 50.9
SEGI_39835 Sequoiadendron giganteum HOM05D004097 ORTHO05D005352 1.0e-173 614.4 654 49.2
BcaB03g13994 Brassica carinata HOM05D004097 ORTHO05D005352 6.7e-173 611.7 664 49.8
SHI17952 Sapria himalayana HOM05D004097 ORTHO05D005352 1.3e-171 607.4 689 48.5
Aa31LG7G6710 Aethionema arabicum HOM05D004097 ORTHO05D005352 5.3e-170 602.1 621 50.6
BcaB03g15361 Brassica carinata HOM05D004097 ORTHO05D005352 1.1e-167 594.3 668 50.1
CDE05G0715 Ceratophyllum demersum HOM05D004097 ORTHO05D005352 7.1e-167 591.7 641 49.5
DCAR_026468 Daucus carota HOM05D004097 ORTHO05D005352 6.0e-166 588.6 679 48.3
Ca_18045_v3 Cicer arietinum L. HOM05D004097 ORTHO05D005352 1.0e-165 587.8 699 46.4
Atru.chr11.2303 Acer truncatum HOM05D004097 ORTHO05D005352 4.8e-163 578.9 571 55.0
Nitab4.5_0002174g0010 Nicotiana tabacum HOM05D004097 ORTHO05D005352 6.2e-163 578.6 476 60.9
Carub.0001s2575 Capsella rubella HOM05D004097 ORTHO05D005352 1.4e-162 577.4 613 50.7
CARHR060060 Cardamine hirsuta HOM05D004097 ORTHO05D005352 4.5e-161 572.4 509 57.2
Ca_18046_v3 Cicer arietinum L. HOM05D004097 ORTHO05D005352 1.3e-147 527.7 480 56.2
Sp1g06290 Schrenkiella parvula HOM05D004097 ORTHO05D005352 1.0e-144 518.1 617 46.0
Mapoly0071s0095 Marchantia polymorpha HOM05D004097 ORTHO05D005352 2.7e-142 510.0 659 43.2
A10p06090 Brassica napus HOM05D004097 ORTHO05D005352 2.0e-140 503.8 623 45.6
CBR_g11887 Chara braunii HOM05D004097 ORTHO05D005352 3.1e-138 496.5 619 43.1
Sc04g0010030 Simmondsia chinensis HOM05D004097 ORTHO05D005352 5.9e-137 492.3 416 59.9
Pp3c11_13660 Physcomitrium patens HOM05D004097 ORTHO05D005352 1.6e-134 484.2 646 41.3
SMO358G0259 Selaginella moellendorffii HOM05D004097 ORTHO05D005352 5.7e-132 475.7 630 43.2
Haze_12390 Corylus avellana HOM05D004097 ORTHO05D005352 1.3e-131 474.6 368 63.3
Glyma.08G103233 Glycine max HOM05D004097 ORTHO05D005352 4.8e-131 472.6 478 52.3
BolC5t29329H Brassica oleracea HOM05D004097 ORTHO05D005352 2.3e-125 453.8 638 42.0
BcaB02g06725 Brassica carinata HOM05D004097 ORTHO05D005352 1.8e-122 444.1 615 42.8
unitig_22.g6409 Utricularia gibba HOM05D004097 ORTHO05D005352 5.4e-114 416.0 314 63.1
C05p05580 Brassica napus HOM05D004097 ORTHO05D005352 1.1e-111 408.3 570 42.3
AagrBONN_evm.TU.Sc2ySwM_344.2645 Anthoceros agrestis HOM05D004097 ORTHO05D005352 4.7e-102 376.3 516 42.1
Phvul.002G174901 Phaseolus vulgaris HOM05D004097 ORTHO05D005352 5.8e-100 369.4 278 60.4
Cre13.g579734 Chlamydomonas reinhardtii HOM05D004097 ORTHO05D005352 3.2e-98 363.6 645 35.7
VMungo0251G3103 Vigna mungo HOM05D004097 ORTHO05D005352 4.1e-90 336.7 364 50.5
VMungo0251G3132 Vigna mungo HOM05D004097 ORTHO05D005352 4.1e-90 336.7 263 61.6
Oeu036881.1 Olea europaea HOM05D004097 ORTHO05D005352 2.0e-84 317.8 158 100.0
Haze_12391 Corylus avellana HOM05D004097 ORTHO05D005352 2.6e-84 317.4 286 59.4
unitig_22.g6408 Utricularia gibba HOM05D004097 ORTHO05D005352 3.2e-74 283.9 278 55.0
Cfa024667 Carpinus fangiana HOM05D004097 ORTHO05D005352 8.1e-62 242.7 590 30.2
Cpa.g.sc43.13 Carica papaya HOM05D004097 ORTHO05D005352 2.6e-52 211.1 208 53.8
Cpa.g.sc43.17 Carica papaya HOM05D004097 ORTHO05D116738 9.6e-47 192.6 100 83.0
Cpa.g.sc1279.1 Carica papaya HOM05D004097 ORTHO05D005352 6.9e-45 186.4 185 51.4
Haze_12355 Corylus avellana HOM05D004097 ORTHO05D005352 4.2e-42 177.2 616 28.2
TWI36G0648 Tripterygium wilfordii HOM05D004097 ORTHO05D005352 7.4e-39 166.4 97 80.4
Nitab4.5_0002174g0020 Nicotiana tabacum HOM05D004097 ORTHO05D005352 9.0e-37 159.5 184 48.4
Glyma.08G103167 Glycine max HOM05D004097 ORTHO05D005352 5.5e-34 150.2 175 45.1
RcHm_v2.0_Chr7g0216361 Rosa chinensis HOM05D004097 ORTHO05D005352 3.6e-33 147.5 197 44.7
Prupe.1G228900 Prunus persica HOM05D004097 ORTHO05D005352 5.9e-28 130.2 163 46.6
MD16G1117300 Malus domestica HOM05D004097 ORTHO05D005352 7.7e-28 129.8 155 45.2
CAN.G49.23 Capsicum annuum HOM05D004097 ORTHO05D005352 1.0e-27 129.4 84 71.4
BraA10t42875Z Brassica rapa HOM05D004097 ORTHO05D108425 4.4e-23 114.0 226 35.8
FAN22G1343 Fragaria x ananassa HOM05D004097 ORTHO05D005352 8.2e-22 109.8 114 50.9
PSO724G1248 Papaver somniferum HOM05D004097 ORTHO05D005352 4.1e-21 107.5 165 41.8
Actinidia15017 Actinidia chinensis HOM05D004097 ORTHO05D055553 2.9e-19 101.3 101 52.5
Actinidia15018 Actinidia chinensis HOM05D004097 ORTHO05D054282 3.8e-19 100.9 81 59.3
Actinidia15016 Actinidia chinensis HOM05D004097 ORTHO05D005352 7.5e-15 86.7 61 62.3
Psat3g154560 Pisum sativum HOM05D001399 ORTHO05D001670 7.5e-15 86.7 84 47.6
TAR624G1259 Trochodendron aralioides HOM05D000428 ORTHO05D009311 3.7e-14 84.3 41 82.9
TAR626G1714 Trochodendron aralioides HOM05D000428 ORTHO05D009311 1.8e-13 82.0 39 87.2
Sabra10G0046700 Salix brachista HOM05D004097 ORTHO05D005352 4.1e-13 80.9 49 81.6
MBI03_g17125_MAGBIO Magnolia biondii HOM05D000089 ORTHO05D000104 1.3e-11 75.9 44 79.5
Psat7g044200 Pisum sativum HOM05D003089 ORTHO05D003544 1.8e-08 65.5 83 43.4
TPR.G36369 Trifolium pratense HOM05D004097 ORTHO05D001670 4.4e-07 60.8 77 44.2


User provided reference genes

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