Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036469.1 Olea europaea HOM05D001562 ORTHO05D001437 3.9e-111 405.2 271 100.0
Oeu039190.1 Olea europaea HOM05D001562 ORTHO05D001437 2.7e-64 249.6 292 65.1
SalBow1G3436 Salvia bowleyana HOM05D001562 ORTHO05D001437 1.4e-28 131.0 291 50.9
Nitab4.5_0001296g0060 Nicotiana tabacum HOM05D001562 ORTHO05D001437 6.0e-27 125.6 295 48.1
TAR633G0613 Trochodendron aralioides HOM05D001562 ORTHO05D001437 1.7e-26 124.0 300 49.7
QL07p016005 Quercus lobata HOM05D001562 ORTHO05D001437 1.1e-25 121.3 297 43.8
Dinv14556 Davidia involucrata HOM05D001562 ORTHO05D001437 8.1e-24 115.2 289 45.0
TWI34G0920 Tripterygium wilfordii HOM05D001562 ORTHO05D001437 1.1e-23 114.8 301 46.5
MSTRG.26199 Avicennia marina HOM05D001562 ORTHO05D001437 1.4e-23 114.4 292 47.3
MSTRG.6265 Avicennia marina HOM05D001562 ORTHO05D001437 2.4e-23 113.6 165 53.9
Cfa019883 Carpinus fangiana HOM05D001562 ORTHO05D001437 5.2e-23 112.5 301 42.5
Peaxi162Scf00827g00063 Petunia axillaris HOM05D001562 ORTHO05D001437 1.5e-22 110.9 299 44.8
Hma1.2p1_0165F.1_g073360 Hydrangea macrophylla HOM05D001562 ORTHO05D001437 2.6e-22 110.2 298 50.7
Haze_20368 Corylus avellana HOM05D001562 ORTHO05D001437 4.4e-22 109.4 300 43.3
Nn2g14206 Nelumbo nucifera HOM05D001562 ORTHO05D001437 4.4e-22 109.4 303 53.1
Solyc11g012740.2 Solanum lycopersicum HOM05D001562 ORTHO05D001437 2.2e-21 107.1 298 37.2
Sopen11g007480 Solanum pennellii HOM05D001562 ORTHO05D001437 6.4e-21 105.5 298 36.9
Duzib177G1059 Durio zibethinus HOM05D001562 ORTHO05D001437 2.4e-20 103.6 307 45.6
Prupe.7G025900 Prunus persica HOM05D001562 ORTHO05D001437 3.2e-20 103.2 305 43.9
CiPaw.09G053200 Carya illinoinensis HOM05D001562 ORTHO05D001437 1.2e-19 101.3 298 42.6
Eucgr.A02162 Eucalyptus grandis HOM05D001562 ORTHO05D001437 2.1e-19 100.5 309 43.7
TWI32G0837 Tripterygium wilfordii HOM05D001562 ORTHO05D001437 2.7e-19 100.1 301 43.9
Glyma.03G004900 Glycine max HOM05D001562 ORTHO05D001437 1.0e-18 98.2 192 38.5
MD14G1012500 Malus domestica HOM05D001562 ORTHO05D001437 1.0e-18 98.2 297 41.8
DCAR_013503 Daucus carota HOM05D001562 ORTHO05D001437 1.7e-18 97.4 183 45.4
Manes.09G134600 Manihot esculenta HOM05D001562 ORTHO05D001437 1.7e-18 97.4 306 44.1
EL10Ac5g11646 Beta vulgaris HOM05D001562 ORTHO05D001437 1.1e-17 94.7 180 40.6
Atru.chr2.1611 Acer truncatum HOM05D001562 ORTHO05D001437 1.9e-17 94.0 301 43.5
CsaV3_3G039620 Cucumis sativus L. HOM05D001562 ORTHO05D001437 9.6e-17 91.7 189 38.6
Duzib128G1788 Durio zibethinus HOM05D001562 ORTHO05D001437 9.6e-17 91.7 305 43.9
Migut.K00188 Erythranthe guttata HOM05D001562 ORTHO05D001437 1.6e-16 90.9 290 44.5
RcHm_v2.0_Chr3g0495551 Rosa chinensis HOM05D001562 ORTHO05D001437 2.1e-16 90.5 298 41.6
VMungo1383G0082 Vigna mungo HOM05D001562 ORTHO05D001437 2.1e-16 90.5 188 39.4
CANSAT64G1075 Cannabis sativa HOM05D001562 ORTHO05D001437 3.6e-16 89.7 188 42.0
RhsimUnG0023000 Rhododendron simsii HOM05D001562 ORTHO05D001437 3.6e-16 89.7 170 48.2
Lalb_Chr06g0174171 Lupinus albus HOM05D001562 ORTHO05D001437 8.1e-16 88.6 293 38.2
ClCG10G016720 Citrullus lanatus HOM05D001562 ORTHO05D001437 1.4e-15 87.8 189 38.6
Ciclev10031118m.g Citrus clementina HOM05D001562 ORTHO05D001437 1.8e-15 87.4 313 41.5
Aqoxy1G00005 Aquilegia oxysepala HOM05D001562 ORTHO05D001437 3.1e-15 86.7 316 44.0
CSS0049266 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 3.1e-15 86.7 274 48.2
DCAR_016950 Daucus carota HOM05D001562 ORTHO05D001437 3.1e-15 86.7 287 34.5
AUR62037076 Chenopodium quinoa HOM05D001562 ORTHO05D001437 5.3e-15 85.9 179 39.1
Glyma.05G087600 Glycine max HOM05D001562 ORTHO05D001437 5.3e-15 85.9 295 38.6
PGR042G2556 Punica granatum HOM05D001562 ORTHO05D001437 5.3e-15 85.9 314 31.2
Thecc.05G236800 Theobroma cacao HOM05D001562 ORTHO05D001437 6.9e-15 85.5 190 46.8
Lalb_Chr21g0317331 Lupinus albus HOM05D001562 ORTHO05D001437 9.0e-15 85.1 188 36.2
CiPaw.10G044900 Carya illinoinensis HOM05D001562 ORTHO05D001437 1.2e-14 84.7 271 48.3
Psat1g088240 Pisum sativum HOM05D001562 ORTHO05D001437 1.2e-14 84.7 189 41.8
MD12G1014900 Malus domestica HOM05D001562 ORTHO05D001437 7.6e-14 82.0 300 40.3
MELO3C009704.2 Cucumis melo HOM05D001562 ORTHO05D001437 1.7e-13 80.9 301 40.9
Ca_04454_v3 Cicer arietinum L. HOM05D001562 ORTHO05D001437 2.2e-13 80.5 191 38.7
Sed0017141 Sechium edule HOM05D001562 ORTHO05D001437 2.9e-13 80.1 170 41.2
Glyma.19G121100 Glycine max HOM05D001562 ORTHO05D001437 3.8e-13 79.7 190 42.1
Phvul.001G102901 Phaseolus vulgaris HOM05D001562 ORTHO05D001437 6.4e-13 79.0 189 39.2
COL.COLO4_33469 Corchorus olitorius HOM05D001562 ORTHO05D001437 8.4e-13 78.6 310 44.5
Duzib106G1733 Durio zibethinus HOM05D001562 ORTHO05D001437 8.4e-13 78.6 302 40.4
Sc01g0005840 Simmondsia chinensis HOM05D001562 ORTHO05D001437 8.4e-13 78.6 300 41.0
TPR.G20663 Trifolium pratense HOM05D001562 ORTHO05D001437 1.1e-12 78.2 176 42.6
Sed0010319 Sechium edule HOM05D001562 ORTHO05D001437 1.4e-12 77.8 189 36.0
Cc00_g08630 Coffea canephora HOM05D001562 ORTHO05D001437 1.9e-12 77.4 250 39.6
Medtr6g027180 Medicago truncatula HOM05D001562 ORTHO05D001437 4.2e-12 76.3 299 41.8
arahy.Tifrunner.gnm1.ann1.F8BNUE Arachis hypogaea HOM05D001562 ORTHO05D001437 7.1e-12 75.5 188 37.2
arahy.Tifrunner.gnm1.ann1.UT2HDF Arachis hypogaea HOM05D001562 ORTHO05D001437 7.1e-12 75.5 188 37.2
ECA247G2619 Erigeron canadensis HOM05D001562 ORTHO05D001437 7.1e-12 75.5 168 44.0
Lalb_Chr14g0365071 Lupinus albus HOM05D001562 ORTHO05D001437 1.2e-11 74.7 193 31.6
AUR62036494 Chenopodium quinoa HOM05D001562 ORTHO05D001437 4.6e-11 72.8 166 37.3
FvH4_1g29400 Fragaria vesca HOM05D001562 ORTHO05D001437 1.0e-10 71.6 294 38.1
FAN19G2359 Fragaria x ananassa HOM05D001562 ORTHO05D001437 1.0e-10 71.6 294 38.1
Gohir.D11G238400 Gossypium hirsutum HOM05D001562 ORTHO05D001437 1.3e-10 71.2 318 38.4
Medtr7g087450 Medicago truncatula HOM05D001562 ORTHO05D001437 1.7e-10 70.9 163 34.4
Gorai.007G252400 Gossypium raimondii HOM05D001562 ORTHO05D001437 2.3e-10 70.5 322 38.2
Lsat_1_v5_gn_9_32321 Lactuca sativa HOM05D002043 ORTHO05D002207 2.3e-10 70.5 155 50.3
Psat3g084560 Pisum sativum HOM05D001562 ORTHO05D001437 2.3e-10 70.5 186 31.7
MBI19_g15084_MAGBIO Magnolia biondii HOM05D001562 ORTHO05D001437 5.1e-10 69.3 309 38.5
TPR.G33954 Trifolium pratense HOM05D001562 ORTHO05D001437 6.6e-10 68.9 194 39.7
Gohir.A11G224900 Gossypium hirsutum HOM05D001562 ORTHO05D001437 1.9e-09 67.4 206 38.3
PSO339G4702 Papaver somniferum HOM05D001562 ORTHO05D001437 2.5e-09 67.0 289 47.1
PSO384G0282 Papaver somniferum HOM05D001562 ORTHO05D001437 3.3e-09 66.6 291 46.7
HanXRQChr10g0298571 Helianthus annuus HOM05D001562 ORTHO05D001437 5.6e-09 65.9 173 39.3
Lj1g0001304 Lotus japonicus HOM05D001562 ORTHO05D001437 9.6e-09 65.1 290 33.8
Ca_03432_v3 Cicer arietinum L. HOM05D001562 ORTHO05D001437 1.3e-08 64.7 154 39.0
FAN26G1485 Fragaria x ananassa HOM05D001562 ORTHO05D001437 1.8e-07 60.8 289 37.0
CAN.G1156.18 Capsicum annuum HOM05D001562 ORTHO05D001437 2.4e-07 60.5 98 57.1
FAN23G1244 Fragaria x ananassa HOM05D001562 ORTHO05D001437 6.9e-07 58.9 158 38.6
FAN28G2700 Fragaria x ananassa HOM05D001562 ORTHO05D001437 9.0e-07 58.5 177 36.2
Dinv37043 Davidia involucrata HOM05D001562 ORTHO05D001437 1.5e-06 57.8 195 42.6


User provided reference genes

Program Settings