Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036414.1 Olea europaea HOM05D004257 ORTHO05D005202 1.2e-64 249.6 123 100.0
PGSC0003DMG402031052 Solanum tuberosum HOM05D004257 ORTHO05D005202 1.3e-58 229.6 123 91.1
CAN.G637.23 Capsicum annuum HOM05D004257 ORTHO05D005202 3.9e-58 228.0 123 90.2
Nitab4.5_0004454g0010 Nicotiana tabacum HOM05D004257 ORTHO05D005202 3.9e-58 228.0 123 91.1
Solyc03g098140.3 Solanum lycopersicum HOM05D004257 ORTHO05D005202 3.9e-58 228.0 123 90.2
Sopen03g028840 Solanum pennellii HOM05D004257 ORTHO05D005202 3.9e-58 228.0 123 90.2
Dinv06012 Davidia involucrata HOM05D004257 ORTHO05D005202 8.7e-58 226.9 123 90.2
CSS0006901 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.1e-57 226.5 123 87.8
CSS0016221 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.1e-57 226.5 123 87.8
CSS0045427 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.5e-57 226.1 123 89.4
CSS0049630 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.5e-57 226.1 123 89.4
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 1.5e-57 226.1 122 91.8
Potri.005G225700 Populus trichocarpa HOM05D004257 ORTHO05D005202 1.5e-57 226.1 123 88.6
Aqoxy2G03662 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 1.9e-57 225.7 123 87.8
FAN27G2888 Fragaria x ananassa HOM05D004257 ORTHO05D005202 2.5e-57 225.3 123 88.6
Hma1.2p1_0075F.1_g039210 Hydrangea macrophylla HOM05D004257 ORTHO05D005202 2.5e-57 225.3 123 90.2
MBI07_g16916_MAGBIO Magnolia biondii HOM05D004257 ORTHO05D005202 3.3e-57 224.9 123 88.6
Potri.002G037400 Populus trichocarpa HOM05D004257 ORTHO05D005202 3.3e-57 224.9 123 87.8
Aa31sc35G30 Aethionema arabicum HOM05D004257 ORTHO05D005202 4.3e-57 224.6 123 88.6
TAR365G0817 Trochodendron aralioides HOM05D004257 ORTHO05D005202 4.3e-57 224.6 123 90.2
Ah.04g163130 Amaranthus hybridus HOM05D004257 ORTHO05D005202 5.6e-57 224.2 123 87.8
MSTRG.23192 Avicennia marina HOM05D004257 ORTHO05D005202 5.6e-57 224.2 123 90.2
SGA_v2.0_scaffold90G27780 Striga asiatica HOM05D004257 ORTHO05D005202 5.6e-57 224.2 123 89.4
Sabra02G0030200 Salix brachista HOM05D004257 ORTHO05D005202 7.3e-57 223.8 123 87.0
CARHR164610 Cardamine hirsuta HOM05D004257 ORTHO05D005202 9.6e-57 223.4 123 87.0
Migut.O00233 Erythranthe guttata HOM05D004257 ORTHO05D005202 9.6e-57 223.4 123 87.8
RcHm_v2.0_Chr6g0287891 Rosa chinensis HOM05D004257 ORTHO05D005202 9.6e-57 223.4 123 87.8
Thecc.01G256600 Theobroma cacao HOM05D004257 ORTHO05D005202 9.6e-57 223.4 123 87.0
CSS0001153 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.2e-56 223.0 123 88.6
FvH4_2g21300 Fragaria vesca HOM05D004257 ORTHO05D005202 1.2e-56 223.0 123 87.8
FAN24G1061 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.2e-56 223.0 123 87.8
Peaxi162Scf00171g00722 Petunia axillaris HOM05D004257 ORTHO05D005202 1.2e-56 223.0 123 89.4
FAN20G1479 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.6e-56 222.6 123 87.8
Ciclev10021043m.g Citrus clementina HOM05D004257 ORTHO05D005202 2.1e-56 222.2 123 87.8
COL.COLO4_04031 Corchorus olitorius HOM05D004257 ORTHO05D005202 2.1e-56 222.2 123 87.0
QL09p039362 Quercus lobata HOM05D004257 ORTHO05D005202 2.8e-56 221.9 122 86.9
Sc09g0004250 Simmondsia chinensis HOM05D004257 ORTHO05D005202 2.8e-56 221.9 123 87.8
Cc04_g09710 Coffea canephora HOM05D004257 ORTHO05D005202 4.7e-56 221.1 123 87.0
Eucgr.K03257 Eucalyptus grandis HOM05D004257 ORTHO05D005202 4.7e-56 221.1 123 86.2
Manes.12G033300 Manihot esculenta HOM05D004257 ORTHO05D005202 4.7e-56 221.1 123 86.2
Actinidia38939 Actinidia chinensis HOM05D004257 ORTHO05D005202 6.2e-56 220.7 123 86.2
CiPaw.03G265600 Carya illinoinensis HOM05D004257 ORTHO05D005202 6.2e-56 220.7 123 86.2
THA.LOC104825258 Tarenaya hassleriana HOM05D004257 ORTHO05D005202 8.1e-56 220.3 123 87.0
Atru.chr5.1712 Acer truncatum HOM05D004257 ORTHO05D005202 1.1e-55 219.9 123 87.0
BcaC02g09050 Brassica carinata HOM05D004257 ORTHO05D005202 1.1e-55 219.9 123 85.4
BcaC08g44693 Brassica carinata HOM05D004257 ORTHO05D005202 1.1e-55 219.9 123 86.2
C04p37820 Brassica napus HOM05D004257 ORTHO05D005202 1.1e-55 219.9 123 85.4
C06p22290 Brassica napus HOM05D004257 ORTHO05D005202 1.1e-55 219.9 123 86.2
BolC4t25358H Brassica oleracea HOM05D004257 ORTHO05D005202 1.1e-55 219.9 123 85.4
BolC6t37415H Brassica oleracea HOM05D004257 ORTHO05D005202 1.1e-55 219.9 123 86.2
Psat3g056800 Pisum sativum HOM05D004257 ORTHO05D005202 1.1e-55 219.9 123 86.2
PGR044G0150 Punica granatum HOM05D004257 ORTHO05D005202 1.1e-55 219.9 123 86.2
Hund06906 Selenicereus undatus HOM05D004257 ORTHO05D005202 1.1e-55 219.9 123 86.2
AL5G35770 Arabidopsis lyrata HOM05D004257 ORTHO05D005202 1.4e-55 219.5 123 86.2
Nn3g19680 Nelumbo nucifera HOM05D004257 ORTHO05D005202 1.4e-55 219.5 123 87.0
BcaB02g07726 Brassica carinata HOM05D004257 ORTHO05D005202 1.8e-55 219.2 123 86.2
A07p22230 Brassica napus HOM05D004257 ORTHO05D005202 1.8e-55 219.2 123 86.2
Carub.0005s2129 Capsella rubella HOM05D004257 ORTHO05D005202 1.8e-55 219.2 123 86.2
Cfa002439 Carpinus fangiana HOM05D004257 ORTHO05D005202 1.8e-55 219.2 123 86.2
Haze_24645 Corylus avellana HOM05D004257 ORTHO05D005202 1.8e-55 219.2 123 86.2
Duzib138G0002 Durio zibethinus HOM05D004257 ORTHO05D005202 1.8e-55 219.2 123 87.8
Lj5A229T68 Lonicera japonica HOM05D004257 ORTHO05D005202 1.8e-55 219.2 123 87.8
HanXRQChr17g0542071 Helianthus annuus HOM05D004257 ORTHO05D005202 2.4e-55 218.8 123 87.0
AUR62004833 Chenopodium quinoa HOM05D004257 ORTHO05D005202 3.1e-55 218.4 121 86.8
Medtr7g097060 Medicago truncatula HOM05D004257 ORTHO05D005202 3.1e-55 218.4 123 86.2
AUR62040921 Chenopodium quinoa HOM05D004257 ORTHO05D005202 4.0e-55 218.0 121 86.8
ClCG07G001120 Citrullus lanatus HOM05D004257 ORTHO05D005202 4.0e-55 218.0 123 86.2
arahy.Tifrunner.gnm1.ann1.63G7RJ Arachis hypogaea HOM05D004257 ORTHO05D005202 5.2e-55 217.6 123 82.9
arahy.Tifrunner.gnm1.ann1.BG7UA0 Arachis hypogaea HOM05D004257 ORTHO05D005202 5.2e-55 217.6 123 82.9
Thhalv10010498m.g Eutrema salsugineum HOM05D004257 ORTHO05D005202 5.2e-55 217.6 123 84.6
Sed0014699 Sechium edule HOM05D004257 ORTHO05D005202 5.2e-55 217.6 123 86.2
A04p05160 Brassica napus HOM05D004257 ORTHO05D005202 6.9e-55 217.2 123 85.4
BraA04t16226Z Brassica rapa HOM05D004257 ORTHO05D005202 6.9e-55 217.2 123 85.4
FAN15G2746 Fragaria x ananassa HOM05D004257 ORTHO05D005202 6.9e-55 217.2 123 86.2
Prupe.8G222200 Prunus persica HOM05D004257 ORTHO05D005202 9.0e-55 216.9 123 85.4
Duzib133G1463 Durio zibethinus HOM05D004257 ORTHO05D005202 1.2e-54 216.5 123 85.4
Gorai.001G178500 Gossypium raimondii HOM05D004257 ORTHO05D005202 1.2e-54 216.5 123 87.0
AT3G54690 Arabidopsis thaliana HOM05D004257 ORTHO05D005202 1.5e-54 216.1 123 85.4
Gohir.D11G137300 Gossypium hirsutum HOM05D004257 ORTHO05D005202 1.5e-54 216.1 124 86.3
GSVIVG01028350001 Vitis vinifera HOM05D004257 ORTHO05D005202 1.5e-54 216.1 123 85.4
Ca_08681_v3 Cicer arietinum L. HOM05D004257 ORTHO05D005202 2.0e-54 215.7 123 84.6
TWI12G0832 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 2.0e-54 215.7 123 85.4
vmacro10363 Vaccinium macrocarpon HOM05D004257 ORTHO05D005202 2.0e-54 215.7 130 83.8
Glyma.19G165400 Glycine max HOM05D004257 ORTHO05D005202 2.6e-54 215.3 123 82.1
Gohir.A11G131450 Gossypium hirsutum HOM05D004257 ORTHO05D005202 2.6e-54 215.3 124 86.3
Sed0007154 Sechium edule HOM05D004257 ORTHO05D005202 2.6e-54 215.3 123 84.6
Gohir.A07G149400 Gossypium hirsutum HOM05D004257 ORTHO05D005202 3.4e-54 214.9 123 86.2
Gohir.D07G155600 Gossypium hirsutum HOM05D004257 ORTHO05D005202 3.4e-54 214.9 123 86.2
TPR.G7131 Trifolium pratense HOM05D004257 ORTHO05D005202 3.4e-54 214.9 123 85.4
Gorai.007G147100 Gossypium raimondii HOM05D004257 ORTHO05D005202 4.4e-54 214.5 124 85.5
BcaB02g08451 Brassica carinata HOM05D004257 ORTHO05D005202 5.8e-54 214.2 123 83.7
TAR362G0002 Trochodendron aralioides HOM05D004257 ORTHO05D005202 5.8e-54 214.2 123 87.0
Lsat_1_v5_gn_3_39581 Lactuca sativa HOM05D004257 ORTHO05D005202 9.9e-54 213.4 123 84.6
MD05G1195500 Malus domestica HOM05D004257 ORTHO05D005202 9.9e-54 213.4 123 84.6
CANSAT35G1745 Cannabis sativa HOM05D004257 ORTHO05D005202 1.3e-53 213.0 123 84.6
MELO3C012874.2 Cucumis melo HOM05D004257 ORTHO05D005202 1.3e-53 213.0 123 84.6
CsaV3_3G022160 Cucumis sativus L. HOM05D004257 ORTHO05D005202 1.3e-53 213.0 123 84.6
Lalb_Chr01g0019631 Lupinus albus HOM05D004257 ORTHO05D005202 1.3e-53 213.0 123 82.1
PSO832G0932 Papaver somniferum HOM05D004257 ORTHO05D005202 1.3e-53 213.0 123 82.9
TWI18G0956 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 1.3e-53 213.0 123 83.7
CANSAT01G0143 Cannabis sativa HOM05D004257 ORTHO05D005202 1.7e-53 212.6 123 83.7
CiPaw.04G187400 Carya illinoinensis HOM05D004257 ORTHO05D005202 1.7e-53 212.6 123 82.9
Sp5g07760 Schrenkiella parvula HOM05D004257 ORTHO05D005202 1.7e-53 212.6 123 83.7
MSTRG.11529 Avicennia marina HOM05D004257 ORTHO05D005202 2.2e-53 212.2 115 88.7
MD10G1182800 Malus domestica HOM05D004257 ORTHO05D005202 2.9e-53 211.8 123 83.7
unitig_0.g1405 Utricularia gibba HOM05D004257 ORTHO05D005202 2.9e-53 211.8 123 85.4
unitig_61.g26464 Utricularia gibba HOM05D004257 ORTHO05D005202 2.9e-53 211.8 123 83.7
DCAR_014267 Daucus carota HOM05D004257 ORTHO05D005202 3.8e-53 211.5 123 82.9
PSO210G0560 Papaver somniferum HOM05D004257 ORTHO05D005202 4.9e-53 211.1 123 82.1
VMungo1383G3387 Vigna mungo HOM05D004257 ORTHO05D005202 4.9e-53 211.1 123 80.5
Phvul.001G161500 Phaseolus vulgaris HOM05D004257 ORTHO05D005202 6.4e-53 210.7 123 81.3
SGA_v2.0_scaffold25G10776 Striga asiatica HOM05D004257 ORTHO05D005202 8.4e-53 210.3 143 76.9
Aqoxy5G00217 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 1.1e-52 209.9 123 83.7
DCAR_010071 Daucus carota HOM05D004257 ORTHO05D005202 1.1e-52 209.9 123 81.3
ECA246G4101 Erigeron canadensis HOM05D004257 ORTHO05D005202 1.4e-52 209.5 123 83.7
Lj1g0005279 Lotus japonicus HOM05D004257 ORTHO05D005202 3.2e-52 208.4 123 80.5
PSO675G6112 Papaver somniferum HOM05D004257 ORTHO05D005202 4.2e-52 208.0 123 80.5
PSO675G8755 Papaver somniferum HOM05D004257 ORTHO05D005202 4.2e-52 208.0 123 80.5
CDE02G1046 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 5.4e-52 207.6 123 80.5
SEGI_04972 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 5.4e-52 207.6 122 79.5
Zm00001eb207770 Zea mays HOM05D004257 ORTHO05D005202 7.1e-52 207.2 123 79.7
Os02g0158300 Oryza sativa ssp. japonica HOM05D004257 ORTHO05D005202 1.2e-51 206.5 123 79.7
PSO675G8702 Papaver somniferum HOM05D004257 ORTHO05D005202 1.2e-51 206.5 123 79.7
Nitab4.5_0000936g0060 Nicotiana tabacum HOM05D004257 ORTHO05D005202 2.1e-51 205.7 109 90.8
ATR0736G010 Amborella trichopoda HOM05D004257 ORTHO05D005202 2.7e-51 205.3 123 78.9
Actinidia34751 Actinidia chinensis HOM05D000378 ORTHO05D005202 6.0e-51 204.1 109 89.0
CAN.G65.83 Capsicum annuum HOM05D004257 ORTHO05D005202 1.3e-50 203.0 110 87.3
HPP92_017366 Vanilla planifolia HOM05D004257 ORTHO05D005202 1.3e-50 203.0 123 79.7
Zm00001eb232580 Zea mays HOM05D004257 ORTHO05D005202 1.3e-50 203.0 123 77.2
Cpa.g.sc473.3 Carica papaya HOM05D004257 ORTHO05D005202 1.1e-49 199.9 109 86.2
HPP92_010358 Vanilla planifolia HOM05D004257 ORTHO05D005202 9.6e-49 196.8 123 78.0
AagrBONN_evm.TU.Sc2ySwM_344.3818 Anthoceros agrestis HOM05D004257 ORTHO05D005202 8.4e-45 183.7 123 71.5
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 8.4e-45 183.7 123 74.8
AagrBONN_evm.TU.Sc2ySwM_344.1200 Anthoceros agrestis HOM05D004257 ORTHO05D005202 1.1e-44 183.3 123 71.5
Mapoly0023s0132 Marchantia polymorpha HOM05D004257 ORTHO05D005202 1.9e-44 182.6 123 70.7
SMO367G0216 Selaginella moellendorffii HOM05D004257 ORTHO05D005202 9.3e-44 180.3 123 70.7
BraA07t29902Z Brassica rapa HOM05D004257 ORTHO05D005202 4.6e-43 177.9 123 76.4
AagrBONN_evm.TU.Sc2ySwM_228.5393 Anthoceros agrestis HOM05D004257 ORTHO05D005202 8.7e-42 173.7 123 67.5
BcaC05g28242 Brassica carinata HOM05D004257 ORTHO05D005202 1.9e-41 172.6 123 74.0
BolC5t33007H Brassica oleracea HOM05D004257 ORTHO05D005202 1.9e-41 172.6 123 74.0
Pp3c5_14840 Physcomitrium patens HOM05D004257 ORTHO05D005202 6.4e-37 157.5 123 65.0
CBR_g20340 Chara braunii HOM05D004257 ORTHO05D005202 1.3e-34 149.8 128 58.6
CDE04G1210 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 1.8e-34 149.4 81 85.2
Pp3c23_13620 Physcomitrium patens HOM05D004257 ORTHO05D005202 3.0e-34 148.7 123 58.5
Pp3c24_11040 Physcomitrium patens HOM05D004257 ORTHO05D005202 9.0e-31 137.1 122 58.2
SalBow5G3197 Salvia bowleyana HOM05D004257 ORTHO05D005202 2.0e-30 136.0 71 90.1
SalBow5G4297 Salvia bowleyana HOM05D004257 ORTHO05D005202 2.0e-30 136.0 71 90.1
BcaC07g39794 Brassica carinata HOM05D004257 ORTHO05D005202 4.2e-28 128.3 120 57.5
Lsat_1_v5_gn_8_28701 Lactuca sativa HOM05D004257 ORTHO05D005202 2.7e-27 125.6 92 69.6
EL10Ac4g09003 Beta vulgaris HOM05D004257 ORTHO05D005202 2.3e-26 122.5 70 84.3
C08p29840 Brassica napus HOM05D004257 ORTHO05D005202 4.3e-25 118.2 74 78.4
BolC8t50595H Brassica oleracea HOM05D004257 ORTHO05D005202 4.3e-25 118.2 74 78.4
Peaxi162Scf00643g00656 Petunia axillaris HOM05D004257 ORTHO05D005202 1.5e-22 109.8 66 81.8
EL10Ac4g09002 Beta vulgaris HOM05D004257 ORTHO05D005202 9.3e-20 100.5 53 86.8
BcaB01g01067 Brassica carinata HOM05D004257 ORTHO05D092693 1.1e-15 87.0 78 56.4
C05p42800 Brassica napus HOM05D004257 ORTHO05D005202 8.8e-10 67.4 31 96.8
Lsat_1_v5_gn_6_26721 Lactuca sativa HOM05D004257 ORTHO05D230427 4.8e-08 61.6 42 76.2


User provided reference genes

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