Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036352.1 Olea europaea HOM05D001435 ORTHO05D001304 1.4e-57 226.1 117 100.0
Oeu057698.1 Olea europaea HOM05D001435 ORTHO05D001304 4.4e-27 124.8 120 65.8
SalBow4G2002 Salvia bowleyana HOM05D001435 ORTHO05D001304 4.4e-27 124.8 123 65.0
MSTRG.25937 Avicennia marina HOM05D001435 ORTHO05D001304 7.0e-25 117.5 128 60.9
MSTRG.14044 Avicennia marina HOM05D001435 ORTHO05D001304 2.7e-24 115.5 126 61.9
MSTRG.11673 Avicennia marina HOM05D001435 ORTHO05D001304 7.8e-24 114.0 127 58.3
Migut.A00156 Erythranthe guttata HOM05D001435 ORTHO05D001304 5.0e-23 111.3 122 59.0
Lj7A282T45 Lonicera japonica HOM05D001435 ORTHO05D001304 2.1e-21 105.9 122 54.1
CSS0005800 Camellia sinensis var. sinensis HOM05D001435 ORTHO05D001304 3.6e-21 105.1 109 56.0
SGA_v2.0_scaffold169G38680 Striga asiatica HOM05D001435 ORTHO05D001304 3.6e-21 105.1 119 58.0
SalBow1G0862 Salvia bowleyana HOM05D001435 ORTHO05D001304 1.4e-20 103.2 116 57.8
Nitab4.5_0006311g0010 Nicotiana tabacum HOM05D001435 ORTHO05D001304 1.8e-20 102.8 116 56.9
Hma1.2p1_1266F.1_g271400 Hydrangea macrophylla HOM05D001435 ORTHO05D001304 5.2e-20 101.3 91 63.7
Actinidia30299 Actinidia chinensis HOM05D001435 ORTHO05D001304 1.2e-19 100.1 90 62.2
Haze_18219 Corylus avellana HOM05D001435 ORTHO05D001304 1.5e-19 99.8 99 57.6
CSS0047607 Camellia sinensis var. sinensis HOM05D001435 ORTHO05D001304 2.0e-19 99.4 89 64.0
Oeu029403.1 Olea europaea HOM05D001435 ORTHO05D001304 9.8e-19 97.1 120 56.7
Dinv27963 Davidia involucrata HOM05D001435 ORTHO05D001304 1.3e-18 96.7 106 56.6
Actinidia01205 Actinidia chinensis HOM05D000927 ORTHO05D000850 2.2e-18 95.9 91 59.3
Rhsim11G0047300 Rhododendron simsii HOM05D001435 ORTHO05D001304 2.2e-18 95.9 89 62.9
ClCG05G017720 Citrullus lanatus HOM05D001435 ORTHO05D001304 1.1e-17 93.6 107 53.3
Prupe.1G415100 Prunus persica HOM05D001435 ORTHO05D001304 1.1e-17 93.6 125 50.4
Gorai.001G023800 Gossypium raimondii HOM05D001435 ORTHO05D001304 1.4e-17 93.2 109 52.3
Cfa017930 Carpinus fangiana HOM05D001435 ORTHO05D001304 1.9e-17 92.8 103 57.3
Gohir.D07G023100 Gossypium hirsutum HOM05D001435 ORTHO05D001304 1.9e-17 92.8 109 52.3
arahy.Tifrunner.gnm1.ann1.BT0S58 Arachis hypogaea HOM05D001435 ORTHO05D001304 4.1e-17 91.7 115 52.2
arahy.Tifrunner.gnm1.ann1.R3WVNU Arachis hypogaea HOM05D001435 ORTHO05D001304 4.1e-17 91.7 115 52.2
COL.COLO4_21025 Corchorus olitorius HOM05D001435 ORTHO05D001304 7.0e-17 90.9 118 51.7
FAN15G3292 Fragaria x ananassa HOM05D001435 ORTHO05D001304 7.0e-17 90.9 116 54.3
FAN27G2292 Fragaria x ananassa HOM05D001435 ORTHO05D001304 7.0e-17 90.9 116 54.3
FAN20G1683 Fragaria x ananassa HOM05D001435 ORTHO05D001304 9.2e-17 90.5 116 54.3
RcHm_v2.0_Chr6g0310471 Rosa chinensis HOM05D001435 ORTHO05D001304 9.2e-17 90.5 116 54.3
MELO3C016856.2 Cucumis melo HOM05D001435 ORTHO05D001304 1.2e-16 90.1 107 50.5
VMungo1309G0835 Vigna mungo HOM05D001435 ORTHO05D001304 1.2e-16 90.1 121 50.4
QL02p001657 Quercus lobata HOM05D001435 ORTHO05D001304 1.6e-16 89.7 115 52.2
FvH4_2g32200 Fragaria vesca HOM05D001435 ORTHO05D001304 2.1e-16 89.4 117 54.7
FAN24G1394 Fragaria x ananassa HOM05D001435 ORTHO05D001304 2.1e-16 89.4 117 54.7
Glyma.06G050600 Glycine max HOM05D001435 ORTHO05D001304 2.1e-16 89.4 110 54.5
Gohir.A07G022148 Gossypium hirsutum HOM05D001435 ORTHO05D001304 2.1e-16 89.4 117 48.7
Migut.E01554 Erythranthe guttata HOM05D001435 ORTHO05D001304 2.7e-16 89.0 130 50.0
Gohir.A05G044000 Gossypium hirsutum HOM05D001435 ORTHO05D001304 2.7e-16 89.0 116 49.1
vmacro00167 Vaccinium macrocarpon HOM05D001435 ORTHO05D001304 4.6e-16 88.2 89 57.3
CsaV3_4G035460 Cucumis sativus L. HOM05D001435 ORTHO05D001304 6.0e-16 87.8 107 49.5
Cc08_g10310 Coffea canephora HOM05D001435 ORTHO05D001304 1.0e-15 87.0 123 52.8
Gohir.D05G045600 Gossypium hirsutum HOM05D001435 ORTHO05D001304 1.0e-15 87.0 116 48.3
Phvul.009G075900 Phaseolus vulgaris HOM05D001435 ORTHO05D001304 1.7e-15 86.3 121 48.8
Duzib150G0044 Durio zibethinus HOM05D001435 ORTHO05D001304 2.3e-15 85.9 120 48.3
Glyma.04G050000 Glycine max HOM05D001435 ORTHO05D001304 2.3e-15 85.9 114 50.9
Gorai.009G047000 Gossypium raimondii HOM05D001435 ORTHO05D001304 2.3e-15 85.9 116 48.3
Manes.03G046400 Manihot esculenta HOM05D001435 ORTHO05D001304 2.3e-15 85.9 106 50.9
Manes.16G077700 Manihot esculenta HOM05D001435 ORTHO05D001304 2.3e-15 85.9 107 48.6
Sed0022728 Sechium edule HOM05D001435 ORTHO05D001304 2.3e-15 85.9 111 49.5
Thecc.09G050800 Theobroma cacao HOM05D001435 ORTHO05D001304 3.9e-15 85.1 112 49.1
PGR044G0779 Punica granatum HOM05D001435 ORTHO05D001304 5.1e-15 84.7 109 51.4
CANSAT25G0463 Cannabis sativa HOM05D001435 ORTHO05D001304 6.6e-15 84.3 121 48.8
MELO3C010764.2 Cucumis melo HOM05D001435 ORTHO05D001304 2.5e-14 82.4 103 48.5
TWI63G1359 Tripterygium wilfordii HOM05D001435 ORTHO05D001304 2.5e-14 82.4 109 49.5
GSVIVG01035342001 Vitis vinifera HOM05D001435 ORTHO05D001304 4.3e-14 81.6 89 55.1
Sed0000349 Sechium edule HOM05D001435 ORTHO05D001304 7.3e-14 80.9 116 45.7
Sed0009703 Sechium edule HOM05D001435 ORTHO05D001304 7.3e-14 80.9 116 45.7
Duzib168G0652 Durio zibethinus HOM05D001435 ORTHO05D001304 1.2e-13 80.1 109 46.8
Lalb_Chr14g0367871 Lupinus albus HOM05D001435 ORTHO05D001304 1.2e-13 80.1 125 44.8
Ah.10g034610 Amaranthus hybridus HOM05D000927 ORTHO05D000850 1.6e-13 79.7 91 53.8
ClCG08G016910 Citrullus lanatus HOM05D001435 ORTHO05D001304 2.1e-13 79.3 85 55.3
Lalb_Chr11g0063091 Lupinus albus HOM05D001435 ORTHO05D001304 2.1e-13 79.3 105 48.6
CsaV3_2G025700 Cucumis sativus L. HOM05D001435 ORTHO05D001304 2.8e-13 79.0 109 45.9
TPR.G13008 Trifolium pratense HOM05D001435 ORTHO05D001304 2.8e-13 79.0 126 46.0
Lalb_Chr22g0355981 Lupinus albus HOM05D001435 ORTHO05D001304 6.2e-13 77.8 124 46.0
Duzib187G1149 Durio zibethinus HOM05D001435 ORTHO05D001304 2.3e-12 75.9 119 44.5
TWI34G0225 Tripterygium wilfordii HOM05D001435 ORTHO05D001304 3.1e-12 75.5 103 46.6
Ca_13182_v3 Cicer arietinum L. HOM05D001435 ORTHO05D001304 4.0e-12 75.1 118 44.9
Ciclev10009045m.g Citrus clementina HOM05D001435 ORTHO05D001304 5.2e-12 74.7 103 49.5
Lj1g0027715 Lotus japonicus HOM05D001435 ORTHO05D001304 5.2e-12 74.7 125 43.2
Potri.018G059200 Populus trichocarpa HOM05D001435 ORTHO05D001304 5.2e-12 74.7 94 50.0
DCAR_000780 Daucus carota HOM05D001435 ORTHO05D001304 8.9e-12 73.9 97 49.5
Lalb_Chr08g0245121 Lupinus albus HOM05D001435 ORTHO05D001304 4.4e-11 71.6 123 42.3
Medtr1g016800 Medicago truncatula HOM05D001435 ORTHO05D001304 4.4e-11 71.6 130 43.8
Sc09g0009650 Simmondsia chinensis HOM05D001435 ORTHO05D001304 4.4e-11 71.6 93 47.3
Psat6g018840 Pisum sativum HOM05D001435 ORTHO05D001304 7.5e-11 70.9 121 44.6
Glyma.14G092600 Glycine max HOM05D001435 ORTHO05D001304 1.7e-10 69.7 135 41.5
CiPaw.15G042000 Carya illinoinensis HOM05D001435 ORTHO05D001304 2.2e-10 69.3 100 52.0
Potri.006G233100 Populus trichocarpa HOM05D001435 ORTHO05D001304 8.3e-10 67.4 84 52.4
Glyma.17G230900 Glycine max HOM05D001435 ORTHO05D001304 1.4e-09 66.6 123 40.7
Lsat_1_v5_gn_5_44541 Lactuca sativa HOM05D001435 ORTHO05D001304 9.2e-09 63.9 116 38.8
Nn6g35391 Nelumbo nucifera HOM05D001435 ORTHO05D001304 2.1e-08 62.8 117 36.8
Sabra06G0181600 Salix brachista HOM05D001435 ORTHO05D001304 1.7e-07 59.7 112 39.3
Nn8g38956 Nelumbo nucifera HOM05D000927 ORTHO05D000850 3.0e-07 58.9 95 41.1
THA.LOC104799179 Tarenaya hassleriana HOM05D001435 ORTHO05D001304 3.0e-07 58.9 106 45.3
Eucgr.C03003 Eucalyptus grandis HOM05D001435 ORTHO05D001304 3.9e-07 58.5 91 45.1
TAR383G0608 Trochodendron aralioides HOM05D001435 ORTHO05D001304 3.9e-07 58.5 52 55.8
Aqoxy2G00450 Aquilegia oxysepala HOM05D001435 ORTHO05D001304 2.5e-06 55.8 87 36.8
MBI01_g16590_MAGBIO Magnolia biondii HOM05D001435 ORTHO05D001304 4.3e-06 55.1 52 53.8
Atru.chr7.2022 Acer truncatum HOM05D001435 ORTHO05D001304 5.6e-06 54.7 91 46.2
ATR0737G062 Amborella trichopoda HOM05D001435 ORTHO05D001304 7.3e-06 54.3 68 44.1


User provided reference genes

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