Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036133.2 Olea europaea HOM05D002224 ORTHO05D002446 2.4e-167 592.0 292 100.0
Oeu002596.1 Olea europaea HOM05D002224 ORTHO05D002446 3.0e-85 319.3 293 61.4
Dinv29900 Davidia involucrata HOM05D002224 ORTHO05D002446 2.2e-75 286.6 292 53.4
SalBow3G3388 Salvia bowleyana HOM05D002224 ORTHO05D002446 6.4e-75 285.0 293 51.2
Cc03_g04990 Coffea canephora HOM05D002224 ORTHO05D002446 5.4e-74 282.0 291 51.2
Thecc.04G247700 Theobroma cacao HOM05D002224 ORTHO05D002446 7.0e-74 281.6 292 53.1
Prupe.1G033200 Prunus persica HOM05D002224 ORTHO05D002446 2.8e-70 269.6 291 51.2
RcHm_v2.0_Chr4g0391041 Rosa chinensis HOM05D002224 ORTHO05D002446 3.1e-69 266.2 291 49.5
COL.COLO4_15805 Corchorus olitorius HOM05D002224 ORTHO05D002446 3.4e-68 262.7 295 51.9
Sabra08G0124600 Salix brachista HOM05D002224 ORTHO05D002446 4.4e-68 262.3 293 51.2
Peaxi162Scf00024g00053 Petunia axillaris HOM05D002224 ORTHO05D002446 5.8e-68 261.9 292 50.7
MSTRG.24697 Avicennia marina HOM05D002224 ORTHO05D002446 1.3e-67 260.8 292 49.0
Gorai.011G171900 Gossypium raimondii HOM05D002224 ORTHO05D002446 1.7e-67 260.4 294 51.0
Gohir.A10G113500 Gossypium hirsutum HOM05D002224 ORTHO05D002446 3.7e-67 259.2 294 51.7
Potri.008G163300 Populus trichocarpa HOM05D002224 ORTHO05D002446 4.9e-67 258.8 293 50.9
Gohir.D02G043000 Gossypium hirsutum HOM05D002224 ORTHO05D002446 8.3e-67 258.1 293 50.2
Gorai.005G047400 Gossypium raimondii HOM05D002224 ORTHO05D002446 1.1e-66 257.7 293 50.5
Cpa.g.sc44.110 Carica papaya HOM05D002224 ORTHO05D002446 2.4e-66 256.5 292 47.6
Gohir.D10G153900 Gossypium hirsutum HOM05D002224 ORTHO05D002446 5.4e-66 255.4 294 50.3
Gohir.A02G036400 Gossypium hirsutum HOM05D002224 ORTHO05D002446 9.2e-66 254.6 292 50.3
Duzib212G0982 Durio zibethinus HOM05D002224 ORTHO05D002446 1.2e-65 254.2 295 50.2
Rhsim04G0189200 Rhododendron simsii HOM05D002224 ORTHO05D002446 1.0e-64 251.1 299 48.5
Atru.chr4.2182 Acer truncatum HOM05D002224 ORTHO05D002446 3.9e-64 249.2 291 46.4
Ciclev10004192m.g Citrus clementina HOM05D002224 ORTHO05D002446 5.0e-64 248.8 290 47.6
Potri.010G075000 Populus trichocarpa HOM05D002224 ORTHO05D002446 8.6e-64 248.1 293 49.5
Nitab4.5_0008399g0010 Nicotiana tabacum HOM05D002224 ORTHO05D002446 4.3e-63 245.7 295 49.2
Duzib052G0795 Durio zibethinus HOM05D002224 ORTHO05D002446 1.2e-62 244.2 293 48.5
MD13G1209100 Malus domestica HOM05D002224 ORTHO05D002446 8.1e-62 241.5 291 46.4
Gorai.006G247200 Gossypium raimondii HOM05D002224 ORTHO05D002446 1.4e-61 240.7 292 47.6
Nitab4.5_0005738g0010 Nicotiana tabacum HOM05D002224 ORTHO05D002446 1.4e-61 240.7 295 48.8
MSTRG.21894 Avicennia marina HOM05D002224 ORTHO05D002446 1.8e-61 240.4 293 47.1
Gohir.A09G223700 Gossypium hirsutum HOM05D002224 ORTHO05D002446 1.8e-61 240.4 292 47.6
Ca_11941_v3 Cicer arietinum L. HOM05D002224 ORTHO05D002446 3.1e-61 239.6 292 47.9
MD16G1211000 Malus domestica HOM05D002224 ORTHO05D002446 8.9e-61 238.0 294 46.6
FvH4_4g02970 Fragaria vesca HOM05D002224 ORTHO05D002446 2.0e-60 236.9 293 47.1
Gohir.D09G225700 Gossypium hirsutum HOM05D002224 ORTHO05D002446 3.4e-60 236.1 292 46.9
QL06p015924 Quercus lobata HOM05D002224 ORTHO05D002446 4.4e-60 235.7 291 46.0
FAN12G1014 Fragaria x ananassa HOM05D002224 ORTHO05D002446 7.5e-60 235.0 293 46.8
SalBow2G1285 Salvia bowleyana HOM05D002224 ORTHO05D002446 7.5e-60 235.0 293 47.4
FAN17G0240 Fragaria x ananassa HOM05D002224 ORTHO05D002446 2.9e-59 233.0 293 46.8
CiPaw.01G189300 Carya illinoinensis HOM05D002224 ORTHO05D002446 4.9e-59 232.3 291 43.6
Psat6g132600 Pisum sativum HOM05D002224 ORTHO05D002446 6.4e-59 231.9 293 45.4
CiPaw.02G115800 Carya illinoinensis HOM05D002224 ORTHO05D002446 1.4e-58 230.7 291 44.7
CSS0035478 Camellia sinensis var. sinensis HOM05D002224 ORTHO05D002446 1.9e-58 230.3 300 47.0
Sabra10G0033800 Salix brachista HOM05D002224 ORTHO05D002446 7.1e-58 228.4 293 46.8
CANSAT78G0691 Cannabis sativa HOM05D002224 ORTHO05D002446 1.6e-57 227.3 294 43.9
Psat6g107120 Pisum sativum HOM05D002224 ORTHO05D002446 1.6e-57 227.3 294 46.3
CAN.G1007.9 Capsicum annuum HOM05D002224 ORTHO05D002446 1.0e-56 224.6 294 47.6
arahy.Tifrunner.gnm1.ann1.1XI841 Arachis hypogaea HOM05D002224 ORTHO05D002446 1.3e-56 224.2 293 43.3
FAN22G0018 Fragaria x ananassa HOM05D002224 ORTHO05D002446 3.0e-56 223.0 294 45.2
PGSC0003DMG401016322 Solanum tuberosum HOM05D002224 ORTHO05D002446 1.1e-55 221.1 292 45.2
TPR.G26447 Trifolium pratense HOM05D002224 ORTHO05D002446 1.1e-55 221.1 275 46.9
Medtr1g073790 Medicago truncatula HOM05D002224 ORTHO05D002446 1.5e-55 220.7 293 44.0
Lalb_Chr21g0312421 Lupinus albus HOM05D002224 ORTHO05D002446 2.5e-55 219.9 293 43.7
Glyma.10G008700 Glycine max HOM05D002224 ORTHO05D002446 3.3e-55 219.5 291 43.6
VMungo0720G3056 Vigna mungo HOM05D002224 ORTHO05D002446 4.3e-55 219.2 292 44.2
arahy.Tifrunner.gnm1.ann1.E2XQ4Y Arachis hypogaea HOM05D002224 ORTHO05D002446 7.3e-55 218.4 293 42.7
Lj5g0007272 Lotus japonicus HOM05D002224 ORTHO05D002446 7.3e-55 218.4 292 43.2
Sopen03g001460 Solanum pennellii HOM05D002224 ORTHO05D002446 7.3e-55 218.4 296 46.3
Actinidia05459 Actinidia chinensis HOM05D002224 ORTHO05D002446 1.2e-54 217.6 285 46.0
Glyma.20G202100 Glycine max HOM05D002224 ORTHO05D002446 1.2e-54 217.6 292 44.5
Solyc03g005430.4 Solanum lycopersicum HOM05D002224 ORTHO05D002446 2.8e-54 216.5 296 45.9
Oeu058878.1 Olea europaea HOM05D002224 ORTHO05D002446 6.2e-54 215.3 294 48.3
CAN.G638.71 Capsicum annuum HOM05D002224 ORTHO05D002446 1.1e-53 214.5 295 46.8
Glyma.10G188600 Glycine max HOM05D002224 ORTHO05D002446 1.4e-53 214.2 292 43.5
Nitab4.5_0003331g0070 Nicotiana tabacum HOM05D002224 ORTHO05D002446 1.4e-53 214.2 294 45.9
Nitab4.5_0000436g0070 Nicotiana tabacum HOM05D002224 ORTHO05D002446 1.8e-53 213.8 294 45.9
Medtr1g044450 Medicago truncatula HOM05D002224 ORTHO05D002446 2.3e-53 213.4 308 44.2
Phvul.007G271500 Phaseolus vulgaris HOM05D002224 ORTHO05D002446 3.1e-53 213.0 294 43.5
Lalb_Chr02g0150611 Lupinus albus HOM05D002224 ORTHO05D002446 4.0e-53 212.6 292 42.5
Ca_11949_v3 Cicer arietinum L. HOM05D002224 ORTHO05D002446 8.9e-53 211.5 292 44.5
MELO3C006460.2 Cucumis melo HOM05D002224 ORTHO05D002446 8.9e-53 211.5 292 45.2
Sopen06g018860 Solanum pennellii HOM05D002224 ORTHO05D002446 1.2e-52 211.1 292 43.8
TPR.G28750 Trifolium pratense HOM05D002224 ORTHO05D002446 1.2e-52 211.1 300 43.3
VMungo0720G0464 Vigna mungo HOM05D002224 ORTHO05D002446 2.6e-52 209.9 292 43.2
DCAR_002341 Daucus carota HOM05D002224 ORTHO05D002446 4.4e-52 209.1 312 39.7
Lalb_Chr03g0037041 Lupinus albus HOM05D002224 ORTHO05D002446 4.4e-52 209.1 295 43.7
vmacro08439 Vaccinium macrocarpon HOM05D002224 ORTHO05D002446 4.4e-52 209.1 298 43.6
Solyc06g053750.3 Solanum lycopersicum HOM05D002224 ORTHO05D002446 7.6e-52 208.4 292 43.5
DCAR_027286 Daucus carota HOM05D002224 ORTHO05D002446 1.7e-51 207.2 315 41.0
Glyma.20G086700 Glycine max HOM05D002224 ORTHO05D002446 1.7e-51 207.2 293 42.7
Sopen09g032480 Solanum pennellii HOM05D002224 ORTHO05D002446 1.7e-51 207.2 294 45.2
PGSC0003DMG400017192 Solanum tuberosum HOM05D002224 ORTHO05D002446 2.2e-51 206.8 292 44.9
CsaV3_3G012500 Cucumis sativus L. HOM05D002224 ORTHO05D002446 2.9e-51 206.5 292 44.5
arahy.Tifrunner.gnm1.ann1.P060ZG Arachis hypogaea HOM05D002224 ORTHO05D002446 3.8e-51 206.1 291 42.6
TWI73G0813 Tripterygium wilfordii HOM05D002224 ORTHO05D002446 3.2e-50 203.0 293 42.7
AUR62002254 Chenopodium quinoa HOM05D002224 ORTHO05D002446 5.4e-50 202.2 292 42.1
Phvul.007G129700 Phaseolus vulgaris HOM05D002224 ORTHO05D002446 5.4e-50 202.2 290 43.1
TWI09G1092 Tripterygium wilfordii HOM05D002224 ORTHO05D002446 5.4e-50 202.2 294 43.5
AUR62015466 Chenopodium quinoa HOM05D002224 ORTHO05D002446 7.1e-50 201.8 293 43.0
Lj6g0016969 Lotus japonicus HOM05D002224 ORTHO05D002446 7.1e-50 201.8 294 42.5
Rhsim02G0034400 Rhododendron simsii HOM05D002224 ORTHO05D002446 1.6e-49 200.7 289 44.3
arahy.Tifrunner.gnm1.ann1.V2K6XN Arachis hypogaea HOM05D002224 ORTHO05D002446 3.5e-49 199.5 289 40.5
DCAR_030728 Daucus carota HOM05D002224 ORTHO05D002446 4.6e-49 199.1 314 39.2
Lalb_Chr19g0128431 Lupinus albus HOM05D002224 ORTHO05D002446 6.0e-49 198.7 292 41.4
Lj3A795G23 Lonicera japonica HOM05D002224 ORTHO05D002446 3.0e-48 196.4 302 42.7
Peaxi162Scf00019g00284 Petunia axillaris HOM05D002224 ORTHO05D002446 3.0e-48 196.4 293 42.0
TWI53G1239 Tripterygium wilfordii HOM05D002224 ORTHO05D002446 5.1e-48 195.7 291 43.3
TWI53G1395 Tripterygium wilfordii HOM05D002224 ORTHO05D002446 5.1e-48 195.7 291 43.3
ClCG05G004530 Citrullus lanatus HOM05D002224 ORTHO05D002446 6.6e-48 195.3 292 44.5
Manes.15G037500 Manihot esculenta HOM05D002224 ORTHO05D002446 1.2e-46 191.0 293 38.9
TAR362G0167 Trochodendron aralioides HOM05D002224 ORTHO05D002446 1.4e-45 187.6 294 42.2
Eucgr.H03150 Eucalyptus grandis HOM05D002224 ORTHO05D002446 4.0e-45 186.0 291 38.5
Nn1g02667 Nelumbo nucifera HOM05D002224 ORTHO05D002446 5.2e-45 185.7 294 40.8
Sed0000078 Sechium edule HOM05D002224 ORTHO05D002446 2.0e-44 183.7 293 43.3
Manes.03G168200 Manihot esculenta HOM05D002224 ORTHO05D002446 3.4e-44 183.0 292 39.0
Hund11858 Selenicereus undatus HOM05D002224 ORTHO05D002446 4.4e-44 182.6 293 39.6
Hund04557 Selenicereus undatus HOM05D002224 ORTHO05D002446 1.3e-43 181.0 293 39.2
EL10Ac3g05897 Beta vulgaris HOM05D002224 ORTHO05D002446 2.2e-43 180.3 295 38.6
Nn3g19583 Nelumbo nucifera HOM05D002224 ORTHO05D002446 8.4e-43 178.3 298 40.3
HanXRQChr13g0424301 Helianthus annuus HOM05D002224 ORTHO05D002446 2.1e-41 173.7 284 40.1
TAR633G1794 Trochodendron aralioides HOM05D002224 ORTHO05D002446 1.0e-40 171.4 323 38.7
TAR365G0712 Trochodendron aralioides HOM05D002224 ORTHO05D002446 5.1e-40 169.1 298 38.9
ECA240G1645 Erigeron canadensis HOM05D002224 ORTHO05D002446 1.9e-39 167.2 295 41.0
vmacro15416 Vaccinium macrocarpon HOM05D002224 ORTHO05D002446 1.9e-39 167.2 233 43.8
PGR004G2419 Punica granatum HOM05D002224 ORTHO05D002446 2.8e-38 163.3 295 37.3
HanXRQChr03g0092341 Helianthus annuus HOM05D002224 ORTHO05D002446 4.8e-38 162.5 297 37.7
Gorai.002G024900 Gossypium raimondii HOM05D002224 ORTHO05D002446 1.4e-37 161.0 289 39.8
MBI11_g40184_MAGBIO Magnolia biondii HOM05D002224 ORTHO05D002446 2.0e-36 157.1 292 37.0
Haze_11315 Corylus avellana HOM05D002224 ORTHO05D002446 2.6e-36 156.8 241 41.9
Lj6C657T15 Lonicera japonica HOM05D002224 ORTHO05D002446 1.3e-35 154.5 291 37.1
Sc13g0005120 Simmondsia chinensis HOM05D002224 ORTHO05D002446 8.4e-35 151.8 296 37.8
ECA233G3249 Erigeron canadensis HOM05D002224 ORTHO05D002446 1.4e-34 151.0 295 39.0
GSVIVG01018133001 Vitis vinifera HOM05D002224 ORTHO05D002446 2.1e-33 147.1 294 37.4
Sc25g0004120 Simmondsia chinensis HOM05D002224 ORTHO05D002446 2.7e-33 146.7 293 36.2
SGA_v2.0_scaffold308G48105 Striga asiatica HOM05D002224 ORTHO05D002446 2.7e-33 146.7 285 38.9
Actinidia08435 Actinidia chinensis HOM05D002224 ORTHO05D002446 1.3e-30 137.9 126 52.4
Aqoxy5G00291 Aquilegia oxysepala HOM05D002224 ORTHO05D002446 3.2e-26 123.2 309 34.0
unitig_748.g8318 Utricularia gibba HOM05D002224 ORTHO05D002446 1.0e-24 118.2 296 32.1
Lsat_1_v5_gn_3_122660 Lactuca sativa HOM05D002224 ORTHO05D002446 1.8e-24 117.5 175 41.7
PSO210G1885 Papaver somniferum HOM05D002224 ORTHO05D002446 8.7e-24 115.2 319 32.6
PSO832G3587 Papaver somniferum HOM05D002224 ORTHO05D002446 2.5e-23 113.6 318 32.7
Actinidia04472 Actinidia chinensis HOM05D002224 ORTHO05D030959 4.3e-23 112.8 122 50.0
Migut.G00445 Erythranthe guttata HOM05D002224 ORTHO05D002446 9.6e-23 111.7 316 32.0
Ah.07g207460 Amaranthus hybridus HOM05D002224 ORTHO05D002446 2.8e-22 110.2 294 33.3
SHI00617 Sapria himalayana HOM05D002224 ORTHO05D002446 1.1e-21 108.2 289 32.5
unitig_748.g7317 Utricularia gibba HOM05D002224 ORTHO05D002446 4.0e-21 106.3 294 29.3
CDE07G0985 Ceratophyllum demersum HOM05D002224 ORTHO05D002446 1.1e-18 98.2 283 30.7
Aqoxy2G03594 Aquilegia oxysepala HOM05D002224 ORTHO05D002446 1.2e-17 94.7 275 26.9
THA.LOC104801093 Tarenaya hassleriana HOM05D002224 ORTHO05D002446 2.7e-17 93.6 250 32.4
THA.LOC104815986 Tarenaya hassleriana HOM05D002224 ORTHO05D002446 2.7e-17 93.6 295 30.5
PGSC0003DMG401017193 Solanum tuberosum HOM05D000243 ORTHO05D018895 1.3e-16 91.3 161 41.0
PGSC0003DMG402017193 Solanum tuberosum HOM05D000243 ORTHO05D018895 1.3e-16 91.3 161 41.0
AT5G43560 Arabidopsis thaliana HOM05D002224 ORTHO05D002446 5.1e-16 89.4 295 29.5
Sopen09g032470 Solanum pennellii HOM05D000243 ORTHO05D018895 5.1e-16 89.4 172 40.1
Nitab4.5_0001418g0030 Nicotiana tabacum HOM05D000243 ORTHO05D018895 8.7e-16 88.6 161 39.1
Nitab4.5_0005738g0030 Nicotiana tabacum HOM05D002224 ORTHO05D030959 1.1e-15 88.2 120 44.2
TAR636G2710 Trochodendron aralioides HOM05D002224 ORTHO05D002446 3.3e-15 86.7 188 39.9
Solyc09g089550.4 Solanum lycopersicum HOM05D000243 ORTHO05D018895 5.7e-15 85.9 172 38.4
Sp2g08380 Schrenkiella parvula HOM05D002224 ORTHO05D002446 2.8e-14 83.6 290 28.6
A08p37000 Brassica napus HOM05D002224 ORTHO05D002446 1.4e-13 81.3 222 31.5
BraA08t35600Z Brassica rapa HOM05D002224 ORTHO05D002446 1.4e-13 81.3 222 31.5
Sp1g03110 Schrenkiella parvula HOM05D002224 ORTHO05D002446 2.4e-13 80.5 307 28.7
Gohir.A01G024400 Gossypium hirsutum HOM05D002224 ORTHO05D002446 4.1e-13 79.7 155 36.1
A09p67930 Brassica napus HOM05D002224 ORTHO05D002446 4.5e-12 76.3 185 32.4
BraA09t42128Z Brassica rapa HOM05D002224 ORTHO05D002446 5.9e-12 75.9 185 32.4
HPP92_010253 Vanilla planifolia HOM05D002224 ORTHO05D002446 5.9e-12 75.9 304 25.7
Thhalv10006644m.g Eutrema salsugineum HOM05D002224 ORTHO05D002446 7.6e-12 75.5 303 27.7
BolC8t52764H Brassica oleracea HOM05D002224 ORTHO05D002446 1.3e-11 74.7 185 31.9
BcaC07g42175 Brassica carinata HOM05D002224 ORTHO05D002446 1.7e-11 74.3 185 32.4
C08p52350 Brassica napus HOM05D002224 ORTHO05D002446 1.7e-11 74.3 185 32.4
Aa31LG5G3630 Aethionema arabicum HOM05D002224 ORTHO05D002446 2.2e-11 73.9 298 27.9
BcaC07g42194 Brassica carinata HOM05D002224 ORTHO05D002446 3.8e-11 73.2 275 29.8
SGA_v2.0_scaffold79G25653 Striga asiatica HOM05D002224 ORTHO05D002446 5.0e-11 72.8 192 31.2
BolC5t29028H Brassica oleracea HOM05D002224 ORTHO05D002446 1.1e-10 71.6 301 26.2
C08p01010 Brassica napus HOM05D002224 ORTHO05D002446 2.5e-10 70.5 310 28.7
C05p02490 Brassica napus HOM05D002224 ORTHO05D002446 3.2e-10 70.1 301 26.2
A10p02700 Brassica napus HOM05D002224 ORTHO05D002446 7.2e-10 68.9 186 30.1
BolC8t46901H Brassica oleracea HOM05D002224 ORTHO05D002446 7.2e-10 68.9 314 28.3
BraA10t42539Z Brassica rapa HOM05D002224 ORTHO05D002446 7.2e-10 68.9 186 30.1
CAN.G1867.2 Capsicum annuum HOM05D002224 ORTHO05D002446 7.2e-10 68.9 141 36.2
AL8G16740 Arabidopsis lyrata HOM05D002224 ORTHO05D002446 2.7e-09 67.0 286 28.3
BcaC07g36918 Brassica carinata HOM05D002224 ORTHO05D002446 1.0e-08 65.1 202 30.2
AL1G13900 Arabidopsis lyrata HOM05D002224 ORTHO05D002446 1.3e-08 64.7 302 27.2
Os12g0597200 Oryza sativa ssp. japonica HOM05D002224 ORTHO05D002446 1.3e-08 64.7 309 25.9
Os01g0775300 Oryza sativa ssp. japonica HOM05D002224 ORTHO05D002446 3.0e-08 63.5 166 30.1
BcaC06g31689 Brassica carinata HOM05D002224 ORTHO05D002446 3.9e-08 63.2 186 30.6
Actinidia08434 Actinidia chinensis HOM05D002224 ORTHO05D002446 6.7e-08 62.4 129 38.8
Zm00001eb292350 Zea mays HOM05D002224 ORTHO05D002446 6.7e-08 62.4 180 28.9
AL8G43430 Arabidopsis lyrata HOM05D002224 ORTHO05D002446 8.7e-08 62.0 289 27.3
AT1G04300 Arabidopsis thaliana HOM05D002224 ORTHO05D002446 1.9e-07 60.8 309 28.8
CAN.G1007.6 Capsicum annuum HOM05D002224 ORTHO05D030959 2.5e-07 60.5 86 43.0
Carub.0001s0349 Capsella rubella HOM05D002224 ORTHO05D002446 7.4e-07 58.9 305 27.9
Gohir.D01G022400 Gossypium hirsutum HOM05D002224 ORTHO05D002446 1.3e-06 58.2 155 32.3
Zm00001eb030950 Zea mays HOM05D002224 ORTHO05D002446 1.6e-06 57.8 294 26.2


User provided reference genes

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