Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036123.1 Olea europaea HOM05D005650 ORTHO05D007020 3.9e-69 264.6 128 100.0
MSTRG.23341 Avicennia marina HOM05D005650 ORTHO05D007020 6.9e-50 200.7 124 79.8
Actinidia12402 Actinidia chinensis HOM05D005650 ORTHO05D007020 1.3e-48 196.4 127 76.4
CSS0031782 Camellia sinensis var. sinensis HOM05D005650 ORTHO05D007020 3.8e-48 194.9 123 76.4
Dinv26372 Davidia involucrata HOM05D005650 ORTHO05D007020 5.0e-48 194.5 123 77.2
Lj6C735G0 Lonicera japonica HOM05D005650 ORTHO05D007020 1.4e-47 193.0 124 76.6
unitig_21.g20969 Utricularia gibba HOM05D005650 ORTHO05D007020 1.4e-47 193.0 124 74.2
Ciclev10014948m.g Citrus clementina HOM05D005650 ORTHO05D007020 3.2e-47 191.8 123 74.8
Rhsim09G0087900 Rhododendron simsii HOM05D005650 ORTHO05D007020 3.2e-47 191.8 123 75.6
SGA_v2.0_scaffold111G31522 Striga asiatica HOM05D005650 ORTHO05D007020 3.2e-47 191.8 134 71.6
Aqoxy2G00265 Aquilegia oxysepala HOM05D005650 ORTHO05D007020 3.5e-46 188.3 123 72.4
Cc11_g06590 Coffea canephora HOM05D005650 ORTHO05D007020 3.5e-46 188.3 128 73.4
MD13G1018100 Malus domestica HOM05D005650 ORTHO05D007020 3.5e-46 188.3 123 74.8
QL03p037983 Quercus lobata HOM05D005650 ORTHO05D007020 6.1e-46 187.6 123 75.6
GSVIVG01011626001 Vitis vinifera HOM05D005650 ORTHO05D007020 6.1e-46 187.6 127 72.4
TAR622G0850 Trochodendron aralioides HOM05D005650 ORTHO05D007020 7.9e-46 187.2 123 73.2
PSO782G4204 Papaver somniferum HOM05D005650 ORTHO05D007020 1.0e-45 186.8 123 74.0
Aa31LG4G1220 Aethionema arabicum HOM05D005650 ORTHO05D007020 2.3e-45 185.7 124 71.0
MD16G1016000 Malus domestica HOM05D005650 ORTHO05D007020 2.3e-45 185.7 123 73.2
BcaB02g07240 Brassica carinata HOM05D005650 ORTHO05D007020 3.0e-45 185.3 123 70.7
DCAR_023564 Daucus carota HOM05D005650 ORTHO05D007020 3.0e-45 185.3 127 70.1
Nn8g41275 Nelumbo nucifera HOM05D005650 ORTHO05D007020 3.9e-45 184.9 123 74.0
Prupe.7G053000 Prunus persica HOM05D005650 ORTHO05D007020 3.9e-45 184.9 123 73.2
Cpa.g.sc362.1 Carica papaya HOM05D005650 ORTHO05D007020 5.1e-45 184.5 124 73.4
HanXRQChr17g0565991 Helianthus annuus HOM05D005650 ORTHO05D007020 5.1e-45 184.5 124 72.6
PSO063G5777 Papaver somniferum HOM05D005650 ORTHO05D007020 5.1e-45 184.5 123 73.2
AT1G80910 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 6.7e-45 184.1 123 71.5
ECA234G4226 Erigeron canadensis HOM05D005650 ORTHO05D007020 1.1e-44 183.3 124 71.0
arahy.Tifrunner.gnm1.ann1.NIUA4E Arachis hypogaea HOM05D005650 ORTHO05D007020 2.5e-44 182.2 124 70.2
CARHR073550 Cardamine hirsuta HOM05D005650 ORTHO05D007020 2.5e-44 182.2 123 69.1
Hma1.2p1_0192F.1_g083470 Hydrangea macrophylla HOM05D005650 ORTHO05D007020 2.5e-44 182.2 123 72.4
C06p29600 Brassica napus HOM05D005650 ORTHO05D007020 3.3e-44 181.8 123 69.1
A07p26920 Brassica napus HOM05D005650 ORTHO05D007020 4.3e-44 181.4 123 69.1
Carub.0002s2663 Capsella rubella HOM05D005650 ORTHO05D007020 7.4e-44 180.6 123 69.1
BcaC08g45346 Brassica carinata HOM05D005650 ORTHO05D007020 9.7e-44 180.3 123 68.3
Glyma.05G240900 Glycine max HOM05D005650 ORTHO05D007020 9.7e-44 180.3 123 69.9
Atru.chr11.825 Acer truncatum HOM05D005650 ORTHO05D007020 1.3e-43 179.9 127 68.5
arahy.Tifrunner.gnm1.ann1.L5UDEC Arachis hypogaea HOM05D005650 ORTHO05D007020 1.3e-43 179.9 127 69.3
Manes.15G123300 Manihot esculenta HOM05D005650 ORTHO05D007020 1.3e-43 179.9 123 70.7
AT1G16020 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 2.2e-43 179.1 127 69.3
CAN.G1206.2 Capsicum annuum HOM05D005650 ORTHO05D007020 2.2e-43 179.1 123 74.0
Solyc02g062110.4 Solanum lycopersicum HOM05D005650 ORTHO05D007020 2.2e-43 179.1 124 73.4
Thhalv10007433m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 2.8e-43 178.7 123 69.9
Thhalv10018445m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 2.8e-43 178.7 123 69.1
Gohir.A03G112000 Gossypium hirsutum HOM05D005650 ORTHO05D007020 2.8e-43 178.7 123 70.7
Lj4g0026003 Lotus japonicus HOM05D005650 ORTHO05D007020 2.8e-43 178.7 123 69.9
AL1G28180 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 3.7e-43 178.3 127 69.3
Nitab4.5_0000188g0130 Nicotiana tabacum HOM05D005650 ORTHO05D007020 3.7e-43 178.3 128 72.7
Nitab4.5_0002337g0070 Nicotiana tabacum HOM05D005650 ORTHO05D007020 3.7e-43 178.3 128 72.7
Sabra08G0104500 Salix brachista HOM05D005650 ORTHO05D007020 4.8e-43 177.9 123 69.9
Sopen02g013060 Solanum pennellii HOM05D005650 ORTHO05D007020 6.3e-43 177.6 124 72.6
Potri.008G137000 Populus trichocarpa HOM05D005650 ORTHO05D007020 8.2e-43 177.2 123 68.3
Thecc.02G307700 Theobroma cacao HOM05D005650 ORTHO05D007020 8.2e-43 177.2 127 70.1
VMungo0251G0664 Vigna mungo HOM05D005650 ORTHO05D007020 8.2e-43 177.2 124 70.2
VMungo1127G0110 Vigna mungo HOM05D005650 ORTHO05D007020 8.2e-43 177.2 123 69.1
Cfa015047 Carpinus fangiana HOM05D005650 ORTHO05D007020 1.1e-42 176.8 123 71.5
Duzib251G0272 Durio zibethinus HOM05D005650 ORTHO05D007020 1.1e-42 176.8 127 69.3
AL2G40470 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 1.4e-42 176.4 123 69.1
CARHR016520 Cardamine hirsuta HOM05D005650 ORTHO05D007020 1.4e-42 176.4 122 69.7
Sed0001111 Sechium edule HOM05D005650 ORTHO05D007020 1.4e-42 176.4 123 67.5
Duzib248G0273 Durio zibethinus HOM05D005650 ORTHO05D007020 1.8e-42 176.0 123 69.9
Gohir.D02G136500 Gossypium hirsutum HOM05D005650 ORTHO05D007020 1.8e-42 176.0 127 69.3
Gorai.005G152600 Gossypium raimondii HOM05D005650 ORTHO05D007020 1.8e-42 176.0 127 69.3
RcHm_v2.0_Chr4g0442431 Rosa chinensis HOM05D005650 ORTHO05D007020 1.8e-42 176.0 123 70.7
Sp5g34830 Schrenkiella parvula HOM05D005650 ORTHO05D007020 1.8e-42 176.0 123 68.3
PGR004G1106 Punica granatum HOM05D005650 ORTHO05D007020 2.4e-42 175.6 128 70.3
Aa31LG7G600 Aethionema arabicum HOM05D005650 ORTHO05D007020 5.3e-42 174.5 123 66.7
Glyma.08G047900 Glycine max HOM05D005650 ORTHO05D007020 5.3e-42 174.5 127 66.9
Hund07852 Selenicereus undatus HOM05D005650 ORTHO05D007020 5.3e-42 174.5 123 69.1
TPR.G19250 Trifolium pratense HOM05D005650 ORTHO05D007020 5.3e-42 174.5 123 68.3
BolC6t38125H Brassica oleracea HOM05D005650 ORTHO05D007020 6.9e-42 174.1 134 64.2
BraA07t30337Z Brassica rapa HOM05D005650 ORTHO05D007020 6.9e-42 174.1 134 63.4
CiPaw.06G055300 Carya illinoinensis HOM05D005650 ORTHO05D007020 6.9e-42 174.1 123 68.3
CsaV3_5G014540 Cucumis sativus L. HOM05D005650 ORTHO05D007020 6.9e-42 174.1 123 67.5
Eucgr.B02693 Eucalyptus grandis HOM05D005650 ORTHO05D007020 6.9e-42 174.1 127 67.7
Psat4g004560 Pisum sativum HOM05D005650 ORTHO05D007020 6.9e-42 174.1 123 69.1
SalBow3G3602 Salvia bowleyana HOM05D005650 ORTHO05D007020 6.9e-42 174.1 138 65.9
Phvul.011G008500 Phaseolus vulgaris HOM05D005650 ORTHO05D007020 9.0e-42 173.7 123 69.1
Lsat_1_v5_gn_4_23420 Lactuca sativa HOM05D005650 ORTHO05D007020 1.2e-41 173.3 128 66.4
THA.LOC104814015 Tarenaya hassleriana HOM05D005650 ORTHO05D007020 1.5e-41 172.9 123 68.3
AUR62035393 Chenopodium quinoa HOM05D005650 ORTHO05D007020 2.0e-41 172.6 123 67.5
AUR62036082 Chenopodium quinoa HOM05D005650 ORTHO05D007020 2.0e-41 172.6 123 67.5
Sc14g0006580 Simmondsia chinensis HOM05D005650 ORTHO05D007020 2.0e-41 172.6 123 67.5
Carub.0001s1582 Capsella rubella HOM05D005650 ORTHO05D007020 2.6e-41 172.2 123 67.5
FvH4_4g33280 Fragaria vesca HOM05D005650 ORTHO05D007020 4.5e-41 171.4 123 69.1
Medtr8g105900 Medicago truncatula HOM05D005650 ORTHO05D007020 4.5e-41 171.4 127 66.9
TWI74G1652 Tripterygium wilfordii HOM05D005650 ORTHO05D007020 7.7e-41 170.6 127 68.5
FAN07G2273 Fragaria x ananassa HOM05D005650 ORTHO05D007020 1.0e-40 170.2 123 69.9
Sp1g14330 Schrenkiella parvula HOM05D005650 ORTHO05D007020 1.3e-40 169.9 130 66.9
Haze_10848 Corylus avellana HOM05D005650 ORTHO05D007020 2.9e-40 168.7 127 68.5
CANSAT78G2020 Cannabis sativa HOM05D005650 ORTHO05D007020 3.8e-40 168.3 127 68.5
Ah.01g015510 Amaranthus hybridus HOM05D005650 ORTHO05D007020 6.5e-40 167.5 127 65.4
CiPaw.05G158000 Carya illinoinensis HOM05D005650 ORTHO05D007020 1.1e-39 166.8 123 68.3
FAN17G2396 Fragaria x ananassa HOM05D005650 ORTHO05D007020 1.4e-39 166.4 123 66.7
SHI04292 Sapria himalayana HOM05D005650 ORTHO05D007020 1.9e-39 166.0 123 65.0
A09p61060 Brassica napus HOM05D005650 ORTHO05D007020 5.5e-39 164.5 131 65.6
BraA09t41479Z Brassica rapa HOM05D005650 ORTHO05D007020 5.5e-39 164.5 131 65.6
CDE05G1068 Ceratophyllum demersum HOM05D005650 ORTHO05D007020 5.5e-39 164.5 122 64.8
MELO3C026414.2 Cucumis melo HOM05D005650 ORTHO05D007020 6.1e-38 161.0 128 63.3
C08p44650 Brassica napus HOM05D005650 ORTHO05D007020 1.8e-37 159.5 128 64.8
BolC8t52011H Brassica oleracea HOM05D005650 ORTHO05D007020 1.8e-37 159.5 128 64.8
Sed0000862 Sechium edule HOM05D005650 ORTHO05D007020 5.1e-37 157.9 123 61.8
ATR0021G018 Amborella trichopoda HOM05D005650 ORTHO05D007020 6.7e-37 157.5 123 63.4
Os08g0427300 Oryza sativa ssp. japonica HOM05D005650 ORTHO05D007020 3.3e-36 155.2 123 61.8
Zm00001eb179310 Zea mays HOM05D005650 ORTHO05D007020 4.3e-36 154.8 123 61.0
Lalb_Chr14g0362121 Lupinus albus HOM05D005650 ORTHO05D007020 2.0e-33 146.0 123 53.7
Dinv01894 Davidia involucrata HOM05D005650 ORTHO05D007020 4.2e-31 138.3 79 78.5
SEGI_01999 Sequoiadendron giganteum HOM05D005650 ORTHO05D007020 1.2e-30 136.7 123 54.5
BcaB03g14509 Brassica carinata HOM05D005650 ORTHO05D007020 3.7e-27 125.2 124 54.0
C06p32880 Brassica napus HOM05D005650 ORTHO05D007020 3.1e-26 122.1 116 56.9
EL10Ac9g20842 Beta vulgaris HOM05D005650 ORTHO05D007020 7.0e-26 120.9 76 72.4
Mapoly0059s0063 Marchantia polymorpha HOM05D005650 ORTHO05D007020 6.5e-24 114.4 123 45.5
C05p23900 Brassica napus HOM05D005650 ORTHO05D007020 1.6e-22 109.8 128 50.0
Pp3c16_7940 Physcomitrium patens HOM05D005650 ORTHO05D007020 4.7e-22 108.2 128 43.8
AagrBONN_evm.TU.Sc2ySwM_117.2271 Anthoceros agrestis HOM05D005650 ORTHO05D007020 6.3e-19 97.8 123 41.5
SMO146G0258 Selaginella moellendorffii HOM05D005650 ORTHO05D007020 2.4e-18 95.9 123 37.4
HPP92_009689 Vanilla planifolia HOM05D005650 ORTHO05D007020 7.7e-17 90.9 89 50.6
Migut.H02363 Erythranthe guttata HOM05D005650 ORTHO05D007020 1.8e-13 79.7 128 42.2
COL.COLO4_27613 Corchorus olitorius HOM05D005650 ORTHO05D007020 4.5e-09 65.1 51 66.7
C06p53600 Brassica napus HOM05D005650 ORTHO05D040396 9.4e-07 57.4 40 70.0
Peaxi162Scf00439g00528 Petunia axillaris HOM05D005650 ORTHO05D007020 3.6e-06 55.5 124 33.1


User provided reference genes

Program Settings