Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 0.0e+00 1211.4 607 100.0
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 2.4e-278 961.8 605 78.0
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 2.5e-275 951.8 592 78.2
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 3.4e-272 941.4 589 78.1
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 2.2e-271 938.7 589 77.8
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 1.9e-270 935.6 588 76.9
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 7.1e-270 933.7 602 75.2
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 6.6e-268 927.2 602 75.4
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 7.3e-267 923.7 606 75.7
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 1.6e-266 922.5 606 75.6
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 8.1e-266 920.2 591 76.1
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 1.4e-265 919.5 592 76.0
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 9.0e-265 916.8 592 76.5
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 2.0e-264 915.6 592 76.2
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 3.4e-264 914.8 587 76.8
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 7.6e-264 913.7 608 73.7
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 7.6e-264 913.7 608 72.7
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 9.9e-264 913.3 608 72.7
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 1.7e-263 912.5 592 75.7
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 2.9e-263 911.8 608 72.7
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 4.9e-263 911.0 592 75.8
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 8.4e-263 910.2 589 75.7
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 8.4e-263 910.2 608 73.5
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 1.4e-262 909.4 602 73.3
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 3.2e-262 908.3 603 74.5
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 4.6e-261 904.4 573 75.9
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 5.6e-259 897.5 600 74.2
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 5.6e-259 897.5 591 73.8
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 1.6e-258 896.0 609 72.9
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 3.6e-258 894.8 586 75.6
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 1.2e-256 889.8 608 72.4
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 5.8e-256 887.5 572 76.2
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 6.4e-255 884.0 609 73.9
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 5.4e-254 880.9 618 72.0
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 1.0e-252 876.7 588 73.5
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 3.0e-252 875.2 608 71.5
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 3.3e-251 871.7 611 70.4
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 5.6e-251 870.9 606 71.8
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 5.6e-251 870.9 611 70.0
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 9.6e-251 870.2 595 71.3
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 4.8e-250 867.8 613 70.0
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 6.2e-250 867.5 595 71.8
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.8e-249 865.9 611 69.9
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 1.5e-248 862.8 607 69.9
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 7.6e-248 860.5 611 69.2
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 7.6e-248 860.5 603 69.7
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 1.7e-247 859.4 602 69.9
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 2.9e-247 858.6 611 69.2
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 1.1e-246 856.7 589 71.0
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 1.4e-246 856.3 589 71.1
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 2.4e-246 855.5 590 70.5
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 3.2e-246 855.1 602 69.3
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 4.2e-246 854.7 611 69.1
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 5.5e-246 854.4 610 69.8
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 7.1e-246 854.0 589 70.1
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 8.7e-244 847.0 591 70.6
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 1.5e-243 846.3 595 71.9
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 2.5e-243 845.5 599 69.1
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 1.3e-242 843.2 592 69.9
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 1.1e-241 840.1 599 67.9
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 1.5e-240 836.3 599 67.4
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 3.4e-240 835.1 600 70.0
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 3.4e-240 835.1 600 68.3
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 1.0e-239 833.6 599 67.6
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 4.9e-239 831.2 601 67.6
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 6.5e-239 830.9 600 68.3
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 1.1e-238 830.1 593 71.7
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 1.1e-238 830.1 592 70.6
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 4.6e-237 824.7 598 69.4
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 1.8e-236 822.8 595 68.9
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 4.2e-230 801.6 590 69.2
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 5.5e-230 801.2 592 66.9
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 5.1e-228 794.7 592 66.7
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 1.5e-227 793.1 597 66.2
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 2.5e-227 792.3 593 67.1
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 1.4e-225 786.6 596 64.8
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 3.1e-225 785.4 597 65.7
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 5.9e-224 781.2 591 67.2
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 1.7e-223 779.6 601 65.9
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 6.5e-223 777.7 595 64.2
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 1.9e-222 776.2 595 64.4
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 2.1e-221 772.7 593 65.9
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 2.7e-221 772.3 597 65.2
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 2.7e-221 772.3 597 65.2
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 6.1e-221 771.2 594 64.6
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 2.4e-217 759.2 593 64.1
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 9.4e-214 747.3 564 66.7
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 2.0e-211 739.6 439 84.3
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 3.8e-207 725.3 590 61.7
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 5.0e-207 724.9 531 67.0
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 5.5e-198 694.9 603 58.2
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.1e-185 654.1 488 67.4
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 5.8e-179 631.7 426 72.3
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 2.4e-177 626.3 415 73.0
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 6.2e-173 611.7 594 53.2
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 5.2e-172 608.6 430 70.2
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 5.8e-171 605.1 398 73.6
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 2.1e-165 586.6 612 50.7
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 3.8e-154 549.3 602 48.3
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 7.1e-145 518.5 592 48.0
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 7.1e-145 518.5 399 64.7
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 1.6e-144 517.3 417 63.3
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 4.2e-129 466.1 422 60.0
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 1.2e-120 438.0 602 42.9
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 1.6e-104 384.4 271 73.1
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 5.7e-102 375.9 734 33.8
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 3.2e-52 210.7 179 58.1
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 1.9e-49 201.4 169 60.4
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 1.5e-41 175.3 214 43.9
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 3.4e-38 164.1 129 61.2
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.5e-25 122.1 113 51.3
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 2.6e-22 111.3 79 73.4
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 5.1e-18 97.1 89 55.1
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 2.2e-13 81.6 43 81.4
TWI09G1537 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 6.7e-10 70.1 40 77.5
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 1.9e-09 68.6 47 70.2
SMO165G0130 Selaginella moellendorffii HOM05D000740 ORTHO05D007141 5.3e-07 60.5 223 26.5


User provided reference genes

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