Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035450.1 Olea europaea HOM05D006474 ORTHO05D007994 7.6e-266 919.8 437 100.0
MSTRG.5932 Avicennia marina HOM05D006474 ORTHO05D007994 1.9e-171 606.3 443 65.9
Migut.J00779 Erythranthe guttata HOM05D006474 ORTHO05D007994 3.0e-169 599.0 377 73.5
Nitab4.5_0004916g0010 Nicotiana tabacum HOM05D006474 ORTHO05D007994 4.4e-165 585.1 442 64.0
Cc01_g11810 Coffea canephora HOM05D006474 ORTHO05D007994 1.7e-164 583.2 372 72.0
Nitab4.5_0000028g0400 Nicotiana tabacum HOM05D006474 ORTHO05D007994 3.2e-163 578.9 372 71.5
SGA_v2.0_scaffold112G31632 Striga asiatica HOM05D006474 ORTHO05D007994 7.1e-163 577.8 461 62.3
GSVIVG01029282001 Vitis vinifera HOM05D006474 ORTHO05D007994 2.1e-162 576.2 370 70.5
RcHm_v2.0_Chr4g0398871 Rosa chinensis HOM05D006474 ORTHO05D007994 5.1e-161 571.6 367 70.3
Glyma.17G057700 Glycine max HOM05D006474 ORTHO05D007994 8.7e-161 570.9 371 69.5
Actinidia38505 Actinidia chinensis HOM05D006474 ORTHO05D007994 1.5e-160 570.1 371 70.4
Medtr4g127130 Medicago truncatula HOM05D006474 ORTHO05D007994 1.9e-160 569.7 369 69.1
SalBow1G1087 Salvia bowleyana HOM05D006474 ORTHO05D007994 4.3e-160 568.5 447 62.0
Ca_21263_v3 Cicer arietinum L. HOM05D006474 ORTHO05D007994 5.6e-160 568.2 379 68.3
Peaxi162Scf00046g00533 Petunia axillaris HOM05D006474 ORTHO05D007994 7.3e-160 567.8 430 63.0
Cpa.g.sc115.63 Carica papaya HOM05D006474 ORTHO05D007994 2.1e-159 566.2 397 66.0
vmacro20800 Vaccinium macrocarpon HOM05D006474 ORTHO05D007994 4.8e-159 565.1 396 67.4
PGSC0003DMG400019888 Solanum tuberosum HOM05D006474 ORTHO05D007994 8.1e-159 564.3 367 70.0
arahy.Tifrunner.gnm1.ann1.HVXZ0P Arachis hypogaea HOM05D006474 ORTHO05D007994 1.1e-158 563.9 368 68.5
Sopen07g004200 Solanum pennellii HOM05D006474 ORTHO05D007994 3.1e-158 562.4 416 64.4
Solyc07g008310.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 4.0e-158 562.0 367 70.3
FAN07G0584 Fragaria x ananassa HOM05D006474 ORTHO05D007994 6.9e-158 561.2 367 69.2
Lalb_Chr07g0180731 Lupinus albus HOM05D006474 ORTHO05D007994 5.8e-157 558.1 364 68.7
HanXRQChr06g0181391 Helianthus annuus HOM05D006474 ORTHO05D007994 7.6e-157 557.8 410 64.1
TWI32G0724 Tripterygium wilfordii HOM05D006474 ORTHO05D007994 1.7e-156 556.6 368 67.4
Lj4g0020492 Lotus japonicus HOM05D006474 ORTHO05D007994 3.8e-156 555.4 386 66.1
QL02p064597 Quercus lobata HOM05D006474 ORTHO05D007994 3.8e-156 555.4 431 62.4
Sc14g0003050 Simmondsia chinensis HOM05D006474 ORTHO05D007994 3.8e-156 555.4 365 69.6
MD13G1241100 Malus domestica HOM05D006474 ORTHO05D007994 6.4e-156 554.7 365 69.0
DCAR_020143 Daucus carota HOM05D006474 ORTHO05D007994 2.4e-155 552.7 366 69.7
TAR383G1087 Trochodendron aralioides HOM05D006474 ORTHO05D007994 2.4e-155 552.7 368 67.7
PGR142G0270 Punica granatum HOM05D006474 ORTHO05D007994 3.2e-155 552.4 371 68.5
FvH4_4g06930 Fragaria vesca HOM05D006474 ORTHO05D007994 5.4e-155 551.6 367 68.1
Thecc.04G204000 Theobroma cacao HOM05D006474 ORTHO05D007994 5.4e-155 551.6 372 68.0
FAN17G1111 Fragaria x ananassa HOM05D006474 ORTHO05D007994 7.1e-155 551.2 367 68.1
Potri.006G072800 Populus trichocarpa HOM05D006474 ORTHO05D007994 1.2e-154 550.4 364 69.5
ECA236G3875 Erigeron canadensis HOM05D006474 ORTHO05D007994 2.7e-154 549.3 392 63.8
FAN12G2823 Fragaria x ananassa HOM05D006474 ORTHO05D007994 1.0e-153 547.4 367 67.6
Gohir.A05G408600 Gossypium hirsutum HOM05D006474 ORTHO05D007994 1.0e-153 547.4 372 66.9
Aqoxy7G02891 Aquilegia oxysepala HOM05D006474 ORTHO05D007994 1.8e-153 546.6 365 67.7
TPR.G5392 Trifolium pratense HOM05D006474 ORTHO05D007994 3.0e-153 545.8 370 66.2
AUR62027431 Chenopodium quinoa HOM05D006474 ORTHO05D007994 6.7e-153 544.7 407 63.9
EL10Ac8g19287 Beta vulgaris HOM05D006474 ORTHO05D007994 1.1e-152 543.9 363 68.9
Gorai.012G008200 Gossypium raimondii HOM05D006474 ORTHO05D007994 3.3e-152 542.3 375 66.4
Sabra06G0054200 Salix brachista HOM05D006474 ORTHO05D007994 3.3e-152 542.3 367 68.7
MELO3C009992.2 Cucumis melo HOM05D006474 ORTHO05D007994 5.6e-152 541.6 424 61.1
CiPaw.07G199100 Carya illinoinensis HOM05D006474 ORTHO05D007994 2.1e-151 539.7 426 59.6
Eucgr.C00087 Eucalyptus grandis HOM05D006474 ORTHO05D007994 2.1e-151 539.7 367 65.4
COL.COLO4_37571 Corchorus olitorius HOM05D006474 ORTHO05D007994 4.8e-151 538.5 368 67.7
Manes.06G017600 Manihot esculenta HOM05D006474 ORTHO05D007994 1.4e-150 537.0 367 67.3
ClCG03G011950 Citrullus lanatus HOM05D006474 ORTHO05D007994 6.9e-150 534.6 424 60.4
Dinv41197 Davidia involucrata HOM05D006474 ORTHO05D007994 1.5e-149 533.5 372 68.3
CsaV3_1G043980 Cucumis sativus L. HOM05D006474 ORTHO05D007994 2.6e-149 532.7 424 60.8
Duzib170G0180 Durio zibethinus HOM05D006474 ORTHO05D007994 5.8e-149 531.6 398 62.3
MBI14_g10727_MAGBIO Magnolia biondii HOM05D006474 ORTHO05D007994 5.8e-149 531.6 385 63.4
Migut.J00780 Erythranthe guttata HOM05D006474 ORTHO05D007994 7.6e-149 531.2 371 65.8
Os06g0698785 Oryza sativa ssp. japonica HOM05D006474 ORTHO05D007994 7.6e-149 531.2 366 66.4
CDE02G2399 Ceratophyllum demersum HOM05D006474 ORTHO05D007994 2.2e-148 529.6 368 66.8
arahy.Tifrunner.gnm1.ann1.Z6GGIF Arachis hypogaea HOM05D006474 ORTHO05D007994 3.8e-148 528.9 413 60.3
Aa31LG2G20660 Aethionema arabicum HOM05D006474 ORTHO05D007994 3.2e-147 525.8 410 61.0
Haze_22046 Corylus avellana HOM05D006474 ORTHO05D007994 4.2e-147 525.4 437 57.4
Solyc07g008300.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 9.3e-147 524.2 415 61.2
CARHR237790 Cardamine hirsuta HOM05D006474 ORTHO05D007994 1.6e-146 523.5 438 57.8
Ciclev10008481m.g Citrus clementina HOM05D006474 ORTHO05D007994 1.6e-146 523.5 415 60.7
ATR0580G130 Amborella trichopoda HOM05D006474 ORTHO05D007994 2.7e-146 522.7 393 63.1
Sopen07g004190 Solanum pennellii HOM05D006474 ORTHO05D007994 6.0e-146 521.5 366 66.4
AL7G22360 Arabidopsis lyrata HOM05D006474 ORTHO05D007994 2.3e-145 519.6 366 65.6
PSO063G0500 Papaver somniferum HOM05D006474 ORTHO05D007994 5.1e-145 518.5 429 58.0
Atru.BG.24.p Acer truncatum HOM05D006474 ORTHO05D007994 8.7e-145 517.7 343 68.8
A03p59310 Brassica napus HOM05D006474 ORTHO05D007994 1.1e-144 517.3 372 64.2
BraA03t14988Z Brassica rapa HOM05D006474 ORTHO05D007994 1.1e-144 517.3 372 64.2
AT4G29890 Arabidopsis thaliana HOM05D006474 ORTHO05D007994 1.5e-144 516.9 366 65.3
Zm00001eb273050 Zea mays HOM05D006474 ORTHO05D007994 1.9e-144 516.5 365 64.7
Sp7g27700 Schrenkiella parvula HOM05D006474 ORTHO05D007994 4.3e-144 515.4 367 64.6
C07p57320 Brassica napus HOM05D006474 ORTHO05D007994 5.7e-144 515.0 370 65.4
BolC7t46201H Brassica oleracea HOM05D006474 ORTHO05D007994 5.7e-144 515.0 370 65.7
Carub.0007s1076 Capsella rubella HOM05D006474 ORTHO05D007994 1.3e-143 513.8 366 64.8
Rhsim01G0114400 Rhododendron simsii HOM05D006474 ORTHO05D007994 1.4e-142 510.4 310 73.9
Thhalv10025251m.g Eutrema salsugineum HOM05D006474 ORTHO05D007994 1.8e-142 510.0 367 64.0
BcaNung00499 Brassica carinata HOM05D006474 ORTHO05D007994 4.0e-142 508.8 372 65.1
Nn8g40661 Nelumbo nucifera HOM05D006474 ORTHO05D007994 6.9e-142 508.1 370 65.1
HanXRQChr06g0181381 Helianthus annuus HOM05D006474 ORTHO05D007994 1.2e-141 507.3 403 60.3
Prupe.1G072500 Prunus persica HOM05D006474 ORTHO05D007994 3.4e-141 505.8 367 64.9
HPP92_010297 Vanilla planifolia HOM05D006474 ORTHO05D007994 1.1e-139 500.7 364 62.6
Sed0007392 Sechium edule HOM05D006474 ORTHO05D007994 9.3e-139 497.7 410 57.8
Psat4g014320 Pisum sativum HOM05D006474 ORTHO05D007994 1.0e-137 494.2 376 61.7
Sed0005056 Sechium edule HOM05D006474 ORTHO05D007994 1.3e-137 493.8 368 63.0
Gohir.D04G006800 Gossypium hirsutum HOM05D006474 ORTHO05D007994 4.3e-136 488.8 371 62.0
Lsat_1_v5_gn_8_68301 Lactuca sativa HOM05D006474 ORTHO05D007994 2.8e-135 486.1 431 58.5
AUR62031264 Chenopodium quinoa HOM05D006474 ORTHO05D007994 2.4e-134 483.0 304 72.0
CANSAT54G2413 Cannabis sativa HOM05D006474 ORTHO05D007994 2.6e-133 479.6 354 64.4
Phvul.003G140100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 3.8e-132 475.7 290 72.4
Ah.14g085320 Amaranthus hybridus HOM05D006474 ORTHO05D007994 2.4e-126 456.4 307 68.1
CAN.G403.4 Capsicum annuum HOM05D006474 ORTHO05D007994 2.0e-125 453.4 291 71.5
AagrBONN_evm.TU.Sc2ySwM_117.1622 Anthoceros agrestis HOM05D006474 ORTHO05D007994 2.6e-125 453.0 368 57.6
SMO196G0177 Selaginella moellendorffii HOM05D006474 ORTHO05D007994 7.2e-123 444.9 364 57.7
Pp3c13_13580 Physcomitrium patens HOM05D006474 ORTHO05D007994 1.1e-120 437.6 367 55.3
Mapoly0089s0013 Marchantia polymorpha HOM05D006474 ORTHO05D007994 1.4e-113 414.1 377 51.2
AUR62032506 Chenopodium quinoa HOM05D006474 ORTHO05D007994 1.3e-111 407.5 366 49.5
AUR62043230 Chenopodium quinoa HOM05D006474 ORTHO05D007994 8.2e-111 404.8 366 49.2
PSO170G4238 Papaver somniferum HOM05D006474 ORTHO05D007994 3.0e-105 386.3 344 54.9
CSS0012665 Camellia sinensis var. sinensis HOM05D006474 ORTHO05D007994 1.7e-100 370.5 228 74.1
EL10Ac6g13937 Beta vulgaris HOM05D006474 ORTHO05D007994 1.9e-99 367.1 415 44.3
Lju50A4G45 Lonicera japonica HOM05D006474 ORTHO05D007994 3.2e-99 366.3 246 68.3
Cfa013469 Carpinus fangiana HOM05D006474 ORTHO05D007994 2.3e-97 360.1 280 60.7
MCO02G024 Micromonas commoda HOM05D006474 ORTHO05D007994 5.2e-89 332.4 365 48.5
Hund22985 Selenicereus undatus HOM05D006474 ORTHO05D007994 3.7e-79 299.7 359 46.0
FAN22G2051 Fragaria x ananassa HOM05D006474 ORTHO05D007994 6.4e-71 272.3 320 45.9
Lsat_1_v5_gn_9_69680 Lactuca sativa HOM05D006474 ORTHO05D007994 9.2e-70 268.5 244 57.0
Phvul.010G082000 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 8.9e-65 251.9 186 62.4
Lsat_1_v5_gn_5_32380 Lactuca sativa HOM05D006474 ORTHO05D007994 1.7e-52 211.1 194 52.6
PRCOL_00004194 Prasinoderma coloniale HOM05D006474 ORTHO05D007994 1.5e-51 208.0 469 30.1
Ah.03g136670 Amaranthus hybridus HOM05D006474 ORTHO05D007994 2.6e-48 197.2 236 41.9
SEGI_01125 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 4.3e-43 179.9 126 61.9
Phvul.011G131100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 4.5e-32 143.3 102 59.8
Oeu005633.1 Olea europaea HOM05D006474 ORTHO05D007994 1.1e-27 128.6 64 90.6
RcHm_v2.0_Chr4g0398881 Rosa chinensis HOM05D006474 ORTHO05D007994 3.2e-22 110.5 203 34.0
Actinidia29962 Actinidia chinensis HOM05D006474 ORTHO05D007994 3.9e-20 103.6 102 52.0
Gohir.A08G164600 Gossypium hirsutum HOM05D000075 ORTHO05D000264 7.4e-19 99.4 72 61.1
Gohir.A01G088200 Gossypium hirsutum HOM05D006474 ORTHO05D007994 2.2e-18 97.8 60 73.3
SEGI_13868 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 4.5e-16 90.1 67 64.2
Thecc.09G192500 Theobroma cacao HOM05D006474 ORTHO05D007994 1.0e-15 89.0 60 68.3
Lsat_1_v5_gn_3_77541 Lactuca sativa HOM05D006474 ORTHO05D007994 7.9e-13 79.3 51 68.6
Gohir.A05G306101 Gossypium hirsutum HOM05D005508 ORTHO05D007994 4.3e-11 73.6 43 72.1
SEGI_25707 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 6.9e-09 66.2 43 62.8


User provided reference genes

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