Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035108.1 Olea europaea HOM05D000921 ORTHO05D036458 1.2e-56 223.0 116 100.0
Oeu002265.1 Olea europaea HOM05D000921 ORTHO05D004153 3.7e-18 95.1 72 66.7
Thecc.01G271200 Theobroma cacao HOM05D000921 ORTHO05D004153 1.0e-12 77.0 73 50.7
Gohir.A11G125600 Gossypium hirsutum HOM05D000921 ORTHO05D004153 1.8e-12 76.3 76 51.3
Gohir.D11G131000 Gossypium hirsutum HOM05D000921 ORTHO05D004153 4.0e-12 75.1 76 51.3
Gorai.007G140000 Gossypium raimondii HOM05D000921 ORTHO05D004153 4.0e-12 75.1 76 51.3
CSS0010203 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004153 8.8e-12 73.9 73 46.6
CSS0042369 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004153 8.8e-12 73.9 73 46.6
Duzib133G0456 Durio zibethinus HOM05D000921 ORTHO05D004153 1.5e-11 73.2 80 47.5
SalBow4G3326 Salvia bowleyana HOM05D000921 ORTHO05D004153 1.5e-11 73.2 71 53.5
SGA_v2.0_scaffold1G00535 Striga asiatica HOM05D000921 ORTHO05D004153 1.5e-11 73.2 72 50.0
Rhsim13G0028700 Rhododendron simsii HOM05D000921 ORTHO05D004153 2.0e-11 72.8 73 46.6
COL.COLO4_09186 Corchorus olitorius HOM05D000921 ORTHO05D004153 2.6e-11 72.4 71 49.3
Prupe.8G234500 Prunus persica HOM05D000921 ORTHO05D004153 5.7e-11 71.2 87 47.1
Lj2C1164G7 Lonicera japonica HOM05D000921 ORTHO05D004153 7.5e-11 70.9 71 50.7
Cc01_g18990 Coffea canephora HOM05D000921 ORTHO05D004153 1.3e-10 70.1 71 50.7
Dinv22500 Davidia involucrata HOM05D000921 ORTHO05D004153 1.3e-10 70.1 71 49.3
Nitab4.5_0003424g0020 Nicotiana tabacum HOM05D000921 ORTHO05D004153 3.7e-10 68.6 72 44.4
Solyc09g065700.3 Solanum lycopersicum HOM05D000921 ORTHO05D004153 3.7e-10 68.6 71 47.9
Sopen09g027450 Solanum pennellii HOM05D000921 ORTHO05D004153 3.7e-10 68.6 71 47.9
CAN.G1072.6 Capsicum annuum HOM05D000921 ORTHO05D004153 4.8e-10 68.2 71 47.9
Migut.D00355 Erythranthe guttata HOM05D000921 ORTHO05D004153 4.8e-10 68.2 71 49.3
Nitab4.5_0000459g0090 Nicotiana tabacum HOM05D000921 ORTHO05D004153 4.8e-10 68.2 71 45.1
Sed0015319 Sechium edule HOM05D000921 ORTHO05D004153 6.3e-10 67.8 73 47.9
TWI18G0154 Tripterygium wilfordii HOM05D000921 ORTHO05D004153 6.3e-10 67.8 71 45.1
TWI12G1077 Tripterygium wilfordii HOM05D000921 ORTHO05D004153 8.3e-10 67.4 71 45.1
Cfa006203 Carpinus fangiana HOM05D000921 ORTHO05D004153 1.1e-09 67.0 71 46.5
Eucgr.K03323 Eucalyptus grandis HOM05D000921 ORTHO05D004153 1.1e-09 67.0 71 49.3
MD03G1257800 Malus domestica HOM05D000921 ORTHO05D004153 1.8e-09 66.2 87 42.5
vmacro02613 Vaccinium macrocarpon HOM05D000921 ORTHO05D004153 2.4e-09 65.9 71 46.5
FvH4_2g22920 Fragaria vesca HOM05D000921 ORTHO05D004153 3.1e-09 65.5 76 46.1
FAN15G1223 Fragaria x ananassa HOM05D000921 ORTHO05D004153 3.1e-09 65.5 76 46.1
FAN20G3205 Fragaria x ananassa HOM05D000921 ORTHO05D004153 3.1e-09 65.5 76 46.1
FAN24G0847 Fragaria x ananassa HOM05D000921 ORTHO05D004153 3.1e-09 65.5 76 46.1
FAN27G1722 Fragaria x ananassa HOM05D000921 ORTHO05D004153 3.1e-09 65.5 76 46.1
Gorai.004G056400 Gossypium raimondii HOM05D000921 ORTHO05D004153 3.1e-09 65.5 71 46.5
RcHm_v2.0_Chr6g0289881 Rosa chinensis HOM05D000921 ORTHO05D004153 3.1e-09 65.5 76 44.7
CSS0032745 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004153 4.1e-09 65.1 71 45.1
Aqoxy5G00390 Aquilegia oxysepala HOM05D000921 ORTHO05D004153 5.4e-09 64.7 71 47.9
MD11G1278500 Malus domestica HOM05D000921 ORTHO05D004153 5.4e-09 64.7 111 36.0
Peaxi162Scf00259g00414 Petunia axillaris HOM05D000921 ORTHO05D004153 5.4e-09 64.7 71 45.1
Nn1g00513 Nelumbo nucifera HOM05D000921 ORTHO05D004153 7.0e-09 64.3 75 44.0
arahy.Tifrunner.gnm1.ann1.0T0464 Arachis hypogaea HOM05D000921 ORTHO05D004153 9.1e-09 63.9 73 46.6
Duzib138G1896 Durio zibethinus HOM05D000921 ORTHO05D004153 9.1e-09 63.9 71 46.5
Manes.01G203800 Manihot esculenta HOM05D000921 ORTHO05D004153 2.0e-08 62.8 71 47.9
Actinidia19962 Actinidia chinensis HOM05D000921 ORTHO05D004153 3.5e-08 62.0 71 43.7
GSVIVG01003123001 Vitis vinifera HOM05D000921 ORTHO05D004153 3.5e-08 62.0 71 43.7
MSTRG.21525 Avicennia marina HOM05D000921 ORTHO05D004153 4.5e-08 61.6 71 46.5
Haze_04641 Corylus avellana HOM05D000921 ORTHO05D004153 7.7e-08 60.8 49 55.1
Lj5g0027434 Lotus japonicus HOM05D000921 ORTHO05D004153 7.7e-08 60.8 73 49.3
TAR633G0413 Trochodendron aralioides HOM05D000921 ORTHO05D004153 7.7e-08 60.8 71 45.1
Nn6g33594 Nelumbo nucifera HOM05D000921 ORTHO05D004153 1.0e-07 60.5 71 45.1
THA.LOC104825985 Tarenaya hassleriana HOM05D000921 ORTHO05D004153 1.3e-07 60.1 71 49.3
Atru.chr5.1523 Acer truncatum HOM05D000921 ORTHO05D004153 2.3e-07 59.3 69 42.0
Ca_09726_v3 Cicer arietinum L. HOM05D000921 ORTHO05D004153 2.3e-07 59.3 73 45.2
Glyma.10G030000 Glycine max HOM05D000921 ORTHO05D004153 2.3e-07 59.3 75 45.3
MELO3C015783.2 Cucumis melo HOM05D000921 ORTHO05D004153 2.9e-07 58.9 71 45.1
Dinv32883 Davidia involucrata HOM05D000921 ORTHO05D004153 2.9e-07 58.9 73 43.8
CANSAT25G1208 Cannabis sativa HOM05D000921 ORTHO05D004153 3.8e-07 58.5 71 45.1
CiPaw.07G086700 Carya illinoinensis HOM05D000921 ORTHO05D004153 3.8e-07 58.5 89 39.3
ClCG09G007420 Citrullus lanatus HOM05D000921 ORTHO05D004153 5.0e-07 58.2 71 45.1
CsaV3_7G027700 Cucumis sativus L. HOM05D000921 ORTHO05D004153 5.0e-07 58.2 71 45.1
Glyma.02G144200 Glycine max HOM05D000921 ORTHO05D004153 5.0e-07 58.2 71 47.9
Sabra02G0038900 Salix brachista HOM05D000921 ORTHO05D004153 5.0e-07 58.2 67 49.3
TPR.G34892 Trifolium pratense HOM05D000921 ORTHO05D004153 5.0e-07 58.2 73 49.3
Ciclev10018426m.g Citrus clementina HOM05D000921 ORTHO05D004153 6.6e-07 57.8 71 43.7
HanXRQChr06g0177821 Helianthus annuus HOM05D000921 ORTHO05D004153 6.6e-07 57.8 72 47.2
Medtr1g071260 Medicago truncatula HOM05D000921 ORTHO05D004153 8.6e-07 57.4 72 45.8
Potri.002G047700 Populus trichocarpa HOM05D000921 ORTHO05D004153 8.6e-07 57.4 60 51.7
QL12p042334 Quercus lobata HOM05D000921 ORTHO05D004153 8.6e-07 57.4 73 42.5
Sabra05G0164600 Salix brachista HOM05D000921 ORTHO05D004153 8.6e-07 57.4 71 43.7
Aa31LG1G9470 Aethionema arabicum HOM05D000921 ORTHO05D004153 1.5e-06 56.6 71 43.7
ATR0665G073 Amborella trichopoda HOM05D000921 ORTHO05D004153 1.5e-06 56.6 71 39.4
Lsat_1_v5_gn_5_185441 Lactuca sativa HOM05D000921 ORTHO05D004153 1.5e-06 56.6 71 46.5
PSO210G1924 Papaver somniferum HOM05D000921 ORTHO05D004153 1.5e-06 56.6 72 44.4
Lsat_1_v5_gn_1_73041 Lactuca sativa HOM05D002056 ORTHO05D036458 2.5e-06 55.8 105 37.1
Potri.005G215400 Populus trichocarpa HOM05D000921 ORTHO05D004153 2.5e-06 55.8 73 42.5
Phvul.007G175300 Phaseolus vulgaris HOM05D000921 ORTHO05D004153 3.3e-06 55.5 71 46.5
Psat6g058840 Pisum sativum HOM05D000921 ORTHO05D004153 3.3e-06 55.5 72 45.8
Lalb_Chr06g0162771 Lupinus albus HOM05D000921 ORTHO05D004153 4.2e-06 55.1 72 44.4
VMungo0720G2500 Vigna mungo HOM05D000921 ORTHO05D015533 5.5e-06 54.7 73 45.2
CARHR002410 Cardamine hirsuta HOM05D000921 ORTHO05D004153 7.2e-06 54.3 71 43.7
Lsat_1_v5_gn_1_120080 Lactuca sativa HOM05D001785 ORTHO05D001933 7.2e-06 54.3 88 40.9
Hund02865 Selenicereus undatus HOM05D000921 ORTHO05D004153 7.2e-06 54.3 71 39.4
Gohir.D08G205600 Gossypium hirsutum HOM05D000921 ORTHO05D004153 9.5e-06 53.9 71 42.3
Gorai.004G217600 Gossypium raimondii HOM05D000921 ORTHO05D004153 9.5e-06 53.9 71 42.3


User provided reference genes

Program Settings