Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035084.1 Olea europaea HOM05D000989 ORTHO05D006109 6.4e-73 277.3 141 100.0
SalBow6G4719 Salvia bowleyana HOM05D000989 ORTHO05D006109 1.3e-38 163.3 146 61.0
MSTRG.11572 Avicennia marina HOM05D000989 ORTHO05D006109 2.1e-36 156.0 150 56.7
SGA_v2.0_scaffold122G33258 Striga asiatica HOM05D000989 ORTHO05D006109 4.8e-36 154.8 144 58.3
Prupe.3G027000 Prunus persica HOM05D000989 ORTHO05D006109 9.0e-35 150.6 145 55.9
Thecc.06G052000 Theobroma cacao HOM05D000989 ORTHO05D006109 1.5e-34 149.8 145 56.6
SGA_v2.0_scaffold71G24021 Striga asiatica HOM05D000989 ORTHO05D006109 3.4e-34 148.7 145 56.6
TWI12G0396 Tripterygium wilfordii HOM05D000989 ORTHO05D006109 3.8e-33 145.2 146 54.1
Dinv20318 Davidia involucrata HOM05D000989 ORTHO05D006109 5.0e-33 144.8 146 53.4
Actinidia38817 Actinidia chinensis HOM05D000989 ORTHO05D006109 6.5e-33 144.4 146 54.1
Duzib192G0753 Durio zibethinus HOM05D000989 ORTHO05D006109 8.5e-33 144.1 145 54.5
MD09G1168600 Malus domestica HOM05D000989 ORTHO05D006109 8.5e-33 144.1 148 54.1
MBI16_g00831_MAGBIO Magnolia biondii HOM05D000989 ORTHO05D006109 1.1e-32 143.7 143 54.5
QL05p085514 Quercus lobata HOM05D000989 ORTHO05D006109 1.1e-32 143.7 144 54.9
Atru.chr3.4104 Acer truncatum HOM05D000989 ORTHO05D006109 1.4e-32 143.3 147 51.7
Aqoxy7G02659 Aquilegia oxysepala HOM05D000989 ORTHO05D006109 1.4e-32 143.3 150 54.7
RcHm_v2.0_Chr2g0148611 Rosa chinensis HOM05D000989 ORTHO05D006109 2.5e-32 142.5 149 54.4
Hma1.2p1_0141F.1_g064000 Hydrangea macrophylla HOM05D000989 ORTHO05D006109 5.5e-32 141.4 141 56.7
Haze_16237 Corylus avellana HOM05D000989 ORTHO05D006109 1.2e-31 140.2 145 53.1
Rhsim08G0251900 Rhododendron simsii HOM05D000989 ORTHO05D006109 1.2e-31 140.2 145 54.5
CANSAT01G0659 Cannabis sativa HOM05D000989 ORTHO05D006109 1.6e-31 139.8 143 53.1
AUR62001309 Chenopodium quinoa HOM05D000989 ORTHO05D006109 1.6e-31 139.8 149 51.0
GSVIVG01029461001 Vitis vinifera HOM05D000989 ORTHO05D006109 1.6e-31 139.8 147 53.1
Ciclev10028538m.g Citrus clementina HOM05D000989 ORTHO05D006109 2.1e-31 139.4 142 54.2
Lj5A20T31 Lonicera japonica HOM05D000989 ORTHO05D006109 2.1e-31 139.4 140 57.1
PGSC0003DMG400009197 Solanum tuberosum HOM05D000989 ORTHO05D006109 2.1e-31 139.4 137 54.7
TAR383G0471 Trochodendron aralioides HOM05D000989 ORTHO05D006109 2.1e-31 139.4 149 53.7
Ah.08g217990 Amaranthus hybridus HOM05D000989 ORTHO05D006109 2.7e-31 139.0 144 52.8
Cfa023514 Carpinus fangiana HOM05D000989 ORTHO05D006109 2.7e-31 139.0 145 53.1
EL10Ac7g18115 Beta vulgaris HOM05D000989 ORTHO05D006109 3.6e-31 138.7 145 52.4
Gorai.009G120600 Gossypium raimondii HOM05D000989 ORTHO05D006109 6.1e-31 137.9 151 53.0
Nn8g41214 Nelumbo nucifera HOM05D000989 ORTHO05D006109 6.1e-31 137.9 151 50.3
TAR626G0219 Trochodendron aralioides HOM05D000989 ORTHO05D006109 6.1e-31 137.9 147 53.7
TAR626G0832 Trochodendron aralioides HOM05D000989 ORTHO05D006109 6.1e-31 137.9 147 53.7
FvH4_6g36480 Fragaria vesca HOM05D000989 ORTHO05D006109 7.9e-31 137.5 148 52.7
FAN14G2118 Fragaria x ananassa HOM05D000989 ORTHO05D006109 7.9e-31 137.5 148 52.7
Gohir.A05G116032 Gossypium hirsutum HOM05D000989 ORTHO05D006109 1.0e-30 137.1 150 52.0
Gohir.D05G116600 Gossypium hirsutum HOM05D000989 ORTHO05D006109 1.0e-30 137.1 151 53.0
CiPaw.01G093100 Carya illinoinensis HOM05D000989 ORTHO05D006109 1.3e-30 136.7 143 52.4
COL.COLO4_19515 Corchorus olitorius HOM05D000989 ORTHO05D006109 1.3e-30 136.7 145 53.1
CSS0036335 Camellia sinensis var. sinensis HOM05D000989 ORTHO05D006109 1.8e-30 136.3 139 54.7
Potri.014G001100 Populus trichocarpa HOM05D000989 ORTHO05D006109 1.8e-30 136.3 144 52.8
MD17G1158100 Malus domestica HOM05D000989 ORTHO05D006109 2.3e-30 136.0 150 52.0
Phvul.010G165300 Phaseolus vulgaris HOM05D000989 ORTHO05D006109 3.0e-30 135.6 145 53.1
Lj3g0006607 Lotus japonicus HOM05D000989 ORTHO05D006109 3.9e-30 135.2 142 54.2
HanXRQChr09g0277441 Helianthus annuus HOM05D000989 ORTHO05D006109 6.7e-30 134.4 136 55.1
FAN02G4168 Fragaria x ananassa HOM05D000989 ORTHO05D006109 8.7e-30 134.0 155 49.7
PSO063G2540 Papaver somniferum HOM05D000989 ORTHO05D006109 8.7e-30 134.0 150 50.0
CsaV3_3G020170 Cucumis sativus L. HOM05D000989 ORTHO05D006109 1.1e-29 133.7 138 55.1
DCAR_007676 Daucus carota HOM05D000989 ORTHO05D006109 1.1e-29 133.7 145 52.4
Glyma.08G226000 Glycine max HOM05D000989 ORTHO05D006109 1.1e-29 133.7 145 51.7
Nitab4.5_0004098g0010 Nicotiana tabacum HOM05D000989 ORTHO05D006109 1.5e-29 133.3 136 51.5
Migut.I01212 Erythranthe guttata HOM05D000989 ORTHO05D006109 1.9e-29 132.9 145 51.7
Eucgr.F04053 Eucalyptus grandis HOM05D000989 ORTHO05D006109 1.9e-29 132.9 144 52.1
Hund05662 Selenicereus undatus HOM05D000989 ORTHO05D006109 1.9e-29 132.9 143 51.0
PSO170G5971 Papaver somniferum HOM05D000989 ORTHO05D006109 2.5e-29 132.5 150 50.0
Nitab4.5_0000499g0090 Nicotiana tabacum HOM05D000989 ORTHO05D006109 3.3e-29 132.1 145 49.0
MELO3C023731.2 Cucumis melo HOM05D000989 ORTHO05D006109 5.7e-29 131.3 138 53.6
Potri.007G002700 Populus trichocarpa HOM05D000989 ORTHO05D006109 5.7e-29 131.3 144 53.5
Lsat_1_v5_gn_4_106160 Lactuca sativa HOM05D000989 ORTHO05D006109 7.4e-29 131.0 138 52.2
FAN05G4662 Fragaria x ananassa HOM05D000989 ORTHO05D006109 9.7e-29 130.6 155 49.7
Manes.14G000100 Manihot esculenta HOM05D000989 ORTHO05D006109 9.7e-29 130.6 145 49.0
Medtr4g005140 Medicago truncatula HOM05D000989 ORTHO05D006109 9.7e-29 130.6 144 51.4
Sabra07G0002000 Salix brachista HOM05D000989 ORTHO05D006109 9.7e-29 130.6 144 52.1
Sabra14G0002700 Salix brachista HOM05D000989 ORTHO05D006109 9.7e-29 130.6 146 50.0
CAN.G790.1 Capsicum annuum HOM05D000989 ORTHO05D006109 1.3e-28 130.2 146 49.3
Ca_03771_v3 Cicer arietinum L. HOM05D000570 ORTHO05D001174 1.3e-28 130.2 135 54.1
ClCG05G012260 Citrullus lanatus HOM05D000989 ORTHO05D006109 1.3e-28 130.2 141 52.5
Glyma.07G001000 Glycine max HOM05D000989 ORTHO05D006109 1.3e-28 130.2 145 51.7
FAN09G3581 Fragaria x ananassa HOM05D000989 ORTHO05D006109 1.6e-28 129.8 155 49.0
Sabra14G0003500 Salix brachista HOM05D000989 ORTHO05D006109 1.6e-28 129.8 146 49.3
Sed0020073 Sechium edule HOM05D000989 ORTHO05D006109 1.6e-28 129.8 141 55.3
VMungo0331G0118 Vigna mungo HOM05D000989 ORTHO05D006109 2.2e-28 129.4 147 49.7
Duzib235G1336 Durio zibethinus HOM05D000989 ORTHO05D006109 2.8e-28 129.0 143 51.0
AL1G64210 Arabidopsis lyrata HOM05D000989 ORTHO05D006109 3.7e-28 128.6 145 50.3
Sopen03g041790 Solanum pennellii HOM05D000989 ORTHO05D006109 6.3e-28 127.9 146 48.6
Thhalv10011546m.g Eutrema salsugineum HOM05D000989 ORTHO05D006109 8.2e-28 127.5 145 48.3
arahy.Tifrunner.gnm1.ann1.ECX43N Arachis hypogaea HOM05D000989 ORTHO05D006109 1.1e-27 127.1 138 50.0
Aa31LG10G220 Aethionema arabicum HOM05D000989 ORTHO05D006109 1.4e-27 126.7 150 48.7
Thhalv10020844m.g Eutrema salsugineum HOM05D000989 ORTHO05D006109 1.8e-27 126.3 156 48.7
AT1G55960 Arabidopsis thaliana HOM05D000989 ORTHO05D006109 2.4e-27 125.9 145 49.7
Solyc03g124060.3 Solanum lycopersicum HOM05D000989 ORTHO05D006109 2.4e-27 125.9 146 47.9
HPP92_018325 Vanilla planifolia HOM05D000989 ORTHO05D006109 2.4e-27 125.9 156 49.4
TPR.G38747 Trifolium pratense HOM05D000989 ORTHO05D006109 5.3e-27 124.8 142 49.3
Carub.0003s1239 Capsella rubella HOM05D000989 ORTHO05D006109 9.1e-27 124.0 145 51.7
AUR62025691 Chenopodium quinoa HOM05D000989 ORTHO05D006109 9.1e-27 124.0 160 46.9
Gohir.D02G105300 Gossypium hirsutum HOM05D000989 ORTHO05D006109 1.2e-26 123.6 145 48.3
Gorai.005G119500 Gossypium raimondii HOM05D000989 ORTHO05D006109 1.2e-26 123.6 145 48.3
AT3G13062 Arabidopsis thaliana HOM05D000989 ORTHO05D006109 2.0e-26 122.9 159 46.5
CARHR087630 Cardamine hirsuta HOM05D000989 ORTHO05D006109 2.0e-26 122.9 148 50.0
Peaxi162Scf00684g00414 Petunia axillaris HOM05D000989 ORTHO05D006109 2.0e-26 122.9 135 51.9
Psat7g264760 Pisum sativum HOM05D000570 ORTHO05D001174 2.0e-26 122.9 134 50.7
THA.LOC104815704 Tarenaya hassleriana HOM05D000989 ORTHO05D006109 2.6e-26 122.5 139 52.5
Carub.0001s4457 Capsella rubella HOM05D000989 ORTHO05D006109 3.4e-26 122.1 144 50.0
ATR0626G329 Amborella trichopoda HOM05D000989 ORTHO05D006109 4.5e-26 121.7 142 50.0
CARHR045700 Cardamine hirsuta HOM05D000989 ORTHO05D006109 7.7e-26 120.9 147 47.6
PGR102G0324 Punica granatum HOM05D000989 ORTHO05D006109 1.7e-25 119.8 143 49.7
Atru.chr3.4101 Acer truncatum HOM05D000989 ORTHO05D006109 2.2e-25 119.4 135 48.1
AL3G24790 Arabidopsis lyrata HOM05D000989 ORTHO05D006109 2.9e-25 119.0 144 47.2
BraA01t04080Z Brassica rapa HOM05D000570 ORTHO05D006109 2.9e-25 119.0 146 49.3
C03p46110 Brassica napus HOM05D000989 ORTHO05D006109 3.8e-25 118.6 155 46.5
BolC3t16883H Brassica oleracea HOM05D000989 ORTHO05D006109 3.8e-25 118.6 155 46.5
BraSC56t46391Z Brassica rapa HOM05D000989 ORTHO05D006109 3.8e-25 118.6 141 48.2
Sp1g41570 Schrenkiella parvula HOM05D000989 ORTHO05D006109 6.5e-25 117.9 135 49.6
A01p40460 Brassica napus HOM05D000989 ORTHO05D006109 8.5e-25 117.5 146 47.9
BraA03t12954Z Brassica rapa HOM05D000989 ORTHO05D006109 1.1e-24 117.1 155 46.5
BcaC01g04007 Brassica carinata HOM05D000989 ORTHO05D006109 1.9e-24 116.3 149 47.7
BcaC08g43665 Brassica carinata HOM05D000989 ORTHO05D006109 2.5e-24 115.9 145 49.0
A03p38020 Brassica napus HOM05D000989 ORTHO05D006109 3.2e-24 115.5 152 46.7
BolC6t36168H Brassica oleracea HOM05D000989 ORTHO05D006109 3.2e-24 115.5 145 46.9
CDE05G1780 Ceratophyllum demersum HOM05D000989 ORTHO05D006109 3.2e-24 115.5 129 51.2
C01p52050 Brassica napus HOM05D000989 ORTHO05D006109 4.2e-24 115.2 146 48.6
BolC1t05148H Brassica oleracea HOM05D000989 ORTHO05D006109 4.2e-24 115.2 146 48.6
Sp3g11220 Schrenkiella parvula HOM05D000989 ORTHO05D006109 5.5e-24 114.8 152 49.3
THA.LOC104822743 Tarenaya hassleriana HOM05D000989 ORTHO05D006109 9.4e-24 114.0 142 46.5
C06p10850 Brassica napus HOM05D000989 ORTHO05D006109 1.2e-23 113.6 145 46.9
BcaB07g33179 Brassica carinata HOM05D000989 ORTHO05D006109 1.6e-23 113.2 142 50.7
ECA232G1648 Erigeron canadensis HOM05D000989 ORTHO05D006109 1.6e-23 113.2 127 51.2
ECA233G3623 Erigeron canadensis HOM05D001953 ORTHO05D006109 2.1e-23 112.8 126 51.6
Nn5g26976 Nelumbo nucifera HOM05D000989 ORTHO05D006109 2.1e-23 112.8 138 47.8
Gohir.A03G088600 Gossypium hirsutum HOM05D000989 ORTHO05D006109 3.6e-23 112.1 144 44.4
CDE05G3314 Ceratophyllum demersum HOM05D000989 ORTHO05D006109 7.9e-23 110.9 138 48.6
arahy.Tifrunner.gnm1.ann1.FCN3VB Arachis hypogaea HOM05D000989 ORTHO05D006109 3.0e-22 109.0 180 40.6
Cc04_g00100 Coffea canephora HOM05D000989 ORTHO05D006109 3.0e-22 109.0 133 49.6
Sc15g0001170 Simmondsia chinensis HOM05D000989 ORTHO05D006109 3.3e-21 105.5 147 44.2
Zm00001eb082000 Zea mays HOM05D000989 ORTHO05D006109 6.3e-20 101.3 145 40.7
Zm00001eb240920 Zea mays HOM05D000989 ORTHO05D006109 1.8e-19 99.8 144 38.2
vmacro18725 Vaccinium macrocarpon HOM05D000989 ORTHO05D006109 3.1e-19 99.0 252 32.1
Os02g0468400 Oryza sativa ssp. japonica HOM05D000989 ORTHO05D006109 2.0e-18 96.3 148 38.5
SEGI_20704 Sequoiadendron giganteum HOM05D000989 ORTHO05D006109 2.0e-18 96.3 143 39.9
Pp3c23_14010 Physcomitrium patens HOM05D000989 ORTHO05D006109 3.4e-18 95.5 143 39.2
SGA_v2.0_scaffold71G24020 Striga asiatica HOM05D000011 ORTHO05D000018 2.5e-16 89.4 89 53.9
RcHm_v2.0_Chr1g0356301 Rosa chinensis HOM05D000989 ORTHO05D006109 1.1e-11 73.9 47 72.3
Cpa.g.sc10.6 Carica papaya HOM05D000989 ORTHO05D006109 1.4e-11 73.6 48 72.9
SMO364G0840 Selaginella moellendorffii HOM05D000989 ORTHO05D006109 4.5e-10 68.6 135 30.4
Mapoly0020s0077 Marchantia polymorpha HOM05D000989 ORTHO05D006109 5.9e-10 68.2 140 30.7
Zm00001eb043190 Zea mays HOM05D004148 ORTHO05D006109 1.3e-09 67.0 107 34.6
AagrBONN_evm.TU.Sc2ySwM_117.3861 Anthoceros agrestis HOM05D000989 ORTHO05D006109 3.6e-07 58.9 151 27.8


User provided reference genes

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