Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu034814.1 Olea europaea HOM05D000161 ORTHO05D009031 0.0e+00 1538.9 754 100.0
Oeu057577.1 Olea europaea HOM05D000161 ORTHO05D009031 0.0e+00 1311.2 775 83.7
Dinv33015 Davidia involucrata HOM05D000161 ORTHO05D009031 0.0e+00 1223.0 776 78.5
Actinidia00683 Actinidia chinensis HOM05D000161 ORTHO05D009031 0.0e+00 1209.9 775 76.9
Cc01_g20450 Coffea canephora HOM05D000161 ORTHO05D009031 0.0e+00 1193.7 780 75.0
MSTRG.18182 Avicennia marina HOM05D000161 ORTHO05D009031 0.0e+00 1191.4 778 75.7
vmacro02493 Vaccinium macrocarpon HOM05D000161 ORTHO05D009031 0.0e+00 1191.0 790 74.6
PGSC0003DMG400011361 Solanum tuberosum HOM05D000161 ORTHO05D009031 0.0e+00 1184.9 777 75.4
COL.COLO4_08004 Corchorus olitorius HOM05D000161 ORTHO05D009031 0.0e+00 1184.1 766 76.2
SGA_v2.0_scaffold1G00398 Striga asiatica HOM05D000161 ORTHO05D009031 0.0e+00 1183.3 766 76.8
Migut.D00162 Erythranthe guttata HOM05D000161 ORTHO05D009031 0.0e+00 1179.1 763 76.9
TWI59G0096 Tripterygium wilfordii HOM05D000161 ORTHO05D009031 0.0e+00 1176.8 777 75.0
GSVIVG01010978001 Vitis vinifera HOM05D000161 ORTHO05D009031 0.0e+00 1176.8 764 76.3
Gohir.A11G116600 Gossypium hirsutum HOM05D000161 ORTHO05D009031 0.0e+00 1176.4 775 75.0
Lj2C1188T5 Lonicera japonica HOM05D000161 ORTHO05D009031 0.0e+00 1174.5 788 73.6
Solyc09g074660.3 Solanum lycopersicum HOM05D000161 ORTHO05D009031 0.0e+00 1173.7 766 75.8
Gohir.D11G121700 Gossypium hirsutum HOM05D000161 ORTHO05D009031 0.0e+00 1171.8 774 74.8
CAN.G1777.2 Capsicum annuum HOM05D000161 ORTHO05D009031 0.0e+00 1171.0 769 75.3
Manes.05G066300 Manihot esculenta HOM05D000161 ORTHO05D009031 0.0e+00 1170.2 776 74.0
Ciclev10018836m.g Citrus clementina HOM05D000161 ORTHO05D009031 0.0e+00 1166.4 774 75.3
Prupe.8G255100 Prunus persica HOM05D000161 ORTHO05D009031 0.0e+00 1166.0 776 74.6
Sopen09g029540 Solanum pennellii HOM05D000161 ORTHO05D009031 0.0e+00 1166.0 761 75.4
Gorai.007G130400 Gossypium raimondii HOM05D000161 ORTHO05D009031 0.0e+00 1165.6 774 74.5
Thecc.01G293400 Theobroma cacao HOM05D000161 ORTHO05D009031 0.0e+00 1165.2 776 75.4
Nitab4.5_0001102g0080 Nicotiana tabacum HOM05D000161 ORTHO05D009031 0.0e+00 1164.4 769 75.8
Duzib138G1706 Durio zibethinus HOM05D000161 ORTHO05D009031 0.0e+00 1163.7 778 74.4
TAR362G0905 Trochodendron aralioides HOM05D000161 ORTHO05D009031 0.0e+00 1163.3 775 74.7
MD03G1280600 Malus domestica HOM05D000161 ORTHO05D009031 0.0e+00 1159.8 775 73.5
Cfa005996 Carpinus fangiana HOM05D000161 ORTHO05D009031 0.0e+00 1159.4 776 73.6
CANSAT25G3411 Cannabis sativa HOM05D000161 ORTHO05D009031 0.0e+00 1159.1 758 74.8
Potri.002G209900 Populus trichocarpa HOM05D000161 ORTHO05D009031 0.0e+00 1158.3 776 73.7
CiPaw.07G102700 Carya illinoinensis HOM05D000161 ORTHO05D009031 0.0e+00 1157.5 776 74.5
Nitab4.5_0005245g0010 Nicotiana tabacum HOM05D000161 ORTHO05D009031 0.0e+00 1155.2 768 75.4
CsaV3_7G028900 Cucumis sativus L. HOM05D000161 ORTHO05D009031 0.0e+00 1152.5 765 73.6
Medtr7g108310 Medicago truncatula HOM05D000161 ORTHO05D009031 0.0e+00 1148.3 767 73.7
Atru.chr5.1245 Acer truncatum HOM05D000161 ORTHO05D009031 0.0e+00 1145.6 775 73.9
Sc24g0003880 Simmondsia chinensis HOM05D000161 ORTHO05D009031 0.0e+00 1143.6 779 72.9
Phvul.001G204000 Phaseolus vulgaris HOM05D000161 ORTHO05D009031 0.0e+00 1142.9 766 73.0
ClCG09G006240 Citrullus lanatus HOM05D000161 ORTHO05D009031 0.0e+00 1142.5 776 73.1
Ca_09126_v3 Cicer arietinum L. HOM05D000161 ORTHO05D009031 0.0e+00 1140.9 765 73.6
SalBow3G3810 Salvia bowleyana HOM05D000161 ORTHO05D009031 0.0e+00 1140.6 778 73.5
Glyma.03G210900 Glycine max HOM05D000161 ORTHO05D009031 0.0e+00 1136.7 767 73.1
TPR.G9287 Trifolium pratense HOM05D000161 ORTHO05D009031 0.0e+00 1135.2 769 73.3
EL10Ac7g17434 Beta vulgaris HOM05D000161 ORTHO05D009031 0.0e+00 1134.4 778 72.1
VMungo1383G3032 Vigna mungo HOM05D000161 ORTHO05D009031 0.0e+00 1134.4 769 72.4
RcHm_v2.0_Chr6g0293001 Rosa chinensis HOM05D000161 ORTHO05D009031 0.0e+00 1134.0 774 73.5
Haze_04852 Corylus avellana HOM05D000161 ORTHO05D009031 0.0e+00 1133.2 771 73.8
FvH4_2g25030 Fragaria vesca HOM05D000161 ORTHO05D009031 0.0e+00 1133.2 776 73.5
Glyma.19G208100 Glycine max HOM05D000161 ORTHO05D009031 0.0e+00 1132.9 765 72.8
Lj1g0007269 Lotus japonicus HOM05D000161 ORTHO05D009031 0.0e+00 1132.1 765 73.2
Sabra02G0150400 Salix brachista HOM05D000161 ORTHO05D009031 0.0e+00 1132.1 776 72.4
Sed0007225 Sechium edule HOM05D000161 ORTHO05D009031 0.0e+00 1132.1 768 72.3
Eucgr.K03449 Eucalyptus grandis HOM05D000161 ORTHO05D009031 0.0e+00 1130.9 777 72.1
HanXRQChr11g0350111 Helianthus annuus HOM05D000161 ORTHO05D009031 0.0e+00 1124.4 774 71.3
Lalb_Chr18g0047291 Lupinus albus HOM05D000161 ORTHO05D009031 0.0e+00 1123.6 766 73.0
Aqoxy2G03055 Aquilegia oxysepala HOM05D000161 ORTHO05D009031 0.0e+00 1122.5 776 71.6
Psat3g023920 Pisum sativum HOM05D000161 ORTHO05D009031 0.0e+00 1122.5 767 72.2
ECA236G0218 Erigeron canadensis HOM05D000161 ORTHO05D009031 0.0e+00 1122.1 765 72.0
Rhsim13G0015500 Rhododendron simsii HOM05D000161 ORTHO05D009031 0.0e+00 1120.5 806 69.7
PGR044G2096 Punica granatum HOM05D000161 ORTHO05D009031 0.0e+00 1118.6 778 71.3
Nn3g21368 Nelumbo nucifera HOM05D000161 ORTHO05D009031 0.0e+00 1116.7 774 70.8
PSO170G2241 Papaver somniferum HOM05D000161 ORTHO05D009031 0.0e+00 1109.0 766 71.8
Peaxi162Scf00067g01926 Petunia axillaris HOM05D000161 ORTHO05D009031 0.0e+00 1109.0 715 76.5
FAN24G1124 Fragaria x ananassa HOM05D000161 ORTHO05D009031 0.0e+00 1108.6 776 72.4
PSO210G6500 Papaver somniferum HOM05D000161 ORTHO05D009031 0.0e+00 1102.8 796 69.6
QL12p024497 Quercus lobata HOM05D000161 ORTHO05D009031 0.0e+00 1096.6 706 76.9
Carub.0006s3386 Capsella rubella HOM05D000161 ORTHO05D009031 0.0e+00 1095.5 777 70.0
arahy.Tifrunner.gnm1.ann1.4BF7AZ Arachis hypogaea HOM05D000161 ORTHO05D009031 0.0e+00 1092.4 717 74.3
BcaB01g01973 Brassica carinata HOM05D000161 ORTHO05D009031 0.0e+00 1092.4 768 70.4
FAN27G3195 Fragaria x ananassa HOM05D000161 ORTHO05D009031 0.0e+00 1092.4 788 70.9
MELO3C016048.2 Cucumis melo HOM05D000161 ORTHO05D009031 0.0e+00 1092.0 704 75.7
BraA09t35896Z Brassica rapa HOM05D000161 ORTHO05D009031 0.0e+00 1088.2 768 70.1
unitig_747.g21791 Utricularia gibba HOM05D000161 ORTHO05D009031 0.0e+00 1085.1 830 66.9
C09p02590 Brassica napus HOM05D000161 ORTHO05D009031 0.0e+00 1083.9 768 70.1
BcaC04g23994 Brassica carinata HOM05D000161 ORTHO05D009031 0.0e+00 1082.8 769 70.4
A09p02490 Brassica napus HOM05D000161 ORTHO05D009031 0.0e+00 1082.8 769 70.0
BolC9t53189H Brassica oleracea HOM05D000161 ORTHO05D009031 0.0e+00 1082.8 768 69.8
CARHR251630 Cardamine hirsuta HOM05D000161 ORTHO05D009031 0.0e+00 1082.8 777 69.4
Thhalv10028434m.g Eutrema salsugineum HOM05D000161 ORTHO05D009031 0.0e+00 1082.8 777 69.6
AL6G49740 Arabidopsis lyrata HOM05D000161 ORTHO05D009031 0.0e+00 1080.5 777 68.9
Lsat_1_v5_gn_8_54360 Lactuca sativa HOM05D000161 ORTHO05D009031 0.0e+00 1078.2 785 69.0
Sp6g03230 Schrenkiella parvula HOM05D000161 ORTHO05D009031 0.0e+00 1077.4 777 68.7
Aa31LG5G2700 Aethionema arabicum HOM05D000161 ORTHO05D009031 4.6e-303 1044.3 762 68.4
ATR0706G016 Amborella trichopoda HOM05D000161 ORTHO05D009031 5.1e-302 1040.8 774 67.2
Ah.08g212400 Amaranthus hybridus HOM05D000161 ORTHO05D009031 2.4e-299 1031.9 802 65.7
Cpa.g.sc441.2 Carica papaya HOM05D000161 ORTHO05D009031 4.0e-299 1031.2 683 74.7
AT4G03200 Arabidopsis thaliana HOM05D000161 ORTHO05D009031 6.5e-297 1023.8 705 71.5
CSS0042056 Camellia sinensis var. sinensis HOM05D000161 ORTHO05D009031 2.5e-296 1021.9 644 77.8
MBI19_g24003_MAGBIO Magnolia biondii HOM05D000161 ORTHO05D009031 3.2e-296 1021.5 767 68.7
DCAR_018348 Daucus carota HOM05D000161 ORTHO05D009031 5.5e-296 1020.8 680 74.1
Lj1A36T49 Lonicera japonica HOM05D000161 ORTHO05D009031 2.2e-292 1008.8 777 66.8
AUR62034669 Chenopodium quinoa HOM05D000161 ORTHO05D009031 1.1e-291 1006.5 837 63.6
arahy.Tifrunner.gnm1.ann1.Z5FZN7 Arachis hypogaea HOM05D000161 ORTHO05D009031 1.3e-260 903.3 623 71.3
Pp3c3_16890 Physcomitrium patens HOM05D000161 ORTHO05D009031 7.0e-259 897.5 764 57.9
Mapoly0086s0039 Marchantia polymorpha HOM05D000161 ORTHO05D009031 7.7e-258 894.0 760 57.2
AagrBONN_evm.TU.Sc2ySwM_362.238 Anthoceros agrestis HOM05D000161 ORTHO05D009031 1.8e-251 872.8 771 56.2
Zm00001eb141990 Zea mays HOM05D000161 ORTHO05D009031 9.1e-251 870.5 654 65.6
AUR62008570 Chenopodium quinoa HOM05D000161 ORTHO05D009031 2.3e-246 855.9 707 62.9
HPP92_011821 Vanilla planifolia HOM05D000161 ORTHO05D009031 1.7e-236 823.2 642 63.6
CBR_g39419 Chara braunii HOM05D000019 ORTHO05D000048 9.2e-219 764.2 696 54.2
CDE09G1084 Ceratophyllum demersum HOM05D000161 ORTHO05D009031 7.1e-203 711.4 542 65.9
Lj1A204T33 Lonicera japonica HOM05D000161 ORTHO05D009031 9.4e-147 525.0 616 49.4
Cre07.g331250 Chlamydomonas reinhardtii HOM05D000161 ORTHO05D009031 1.5e-144 517.7 810 39.4
SMO011G0044 Selaginella moellendorffii HOM05D000161 ORTHO05D009031 9.5e-131 471.9 351 63.5
SEGI_38220 Sequoiadendron giganteum HOM05D000161 ORTHO05D009031 1.4e-110 404.8 294 67.3
Os01g0935600 Oryza sativa ssp. japonica HOM05D000161 ORTHO05D009031 6.6e-92 342.8 265 63.8
arahy.Tifrunner.gnm1.ann1.S4ZP24 Arachis hypogaea HOM05D000161 ORTHO05D009031 3.6e-82 310.5 308 57.1
arahy.Tifrunner.gnm1.ann1.FVA5UA Arachis hypogaea HOM05D000161 ORTHO05D009031 1.1e-73 282.3 245 60.8
arahy.Tifrunner.gnm1.ann1.59Y12W Arachis hypogaea HOM05D000161 ORTHO05D007114 2.1e-69 268.1 278 54.3
EL10Ac6g14352 Beta vulgaris HOM05D000161 ORTHO05D009031 7.4e-59 233.0 148 73.0
EL10Ac7g17602 Beta vulgaris HOM05D000161 ORTHO05D039009 5.5e-46 190.3 122 72.1
arahy.Tifrunner.gnm1.ann1.NYYR6I Arachis hypogaea HOM05D000161 ORTHO05D038839 4.4e-43 180.6 138 63.0
SEGI_26615 Sequoiadendron giganteum HOM05D000161 ORTHO05D009031 1.6e-40 172.2 128 66.4
arahy.Tifrunner.gnm1.ann1.A1CTBX Arachis hypogaea HOM05D000161 ORTHO05D083724 1.7e-23 115.5 168 42.9
SEGI_06948 Sequoiadendron giganteum HOM05D000161 ORTHO05D038839 9.4e-22 109.8 107 47.7
Lsat_1_v5_gn_2_56220 Lactuca sativa HOM05D000161 ORTHO05D229717 1.6e-21 109.0 103 55.3
HPP92_011833 Vanilla planifolia HOM05D000161 ORTHO05D036718 1.0e-20 106.3 87 59.8
Lj1A206G50 Lonicera japonica HOM05D000161 ORTHO05D235408 8.3e-18 96.7 124 46.0
EL10Ac9g20878 Beta vulgaris HOM05D008595 ORTHO05D010945 1.2e-16 92.8 62 69.4
SEGI_02592 Sequoiadendron giganteum HOM05D000161 ORTHO05D039009 7.7e-16 90.1 56 76.8
arahy.Tifrunner.gnm1.ann1.0H5KQ4 Arachis hypogaea HOM05D000161 ORTHO05D009031 1.8e-12 79.0 40 85.0
A03p30570 Brassica napus HOM05D000161 ORTHO05D041164 2.0e-08 65.5 41 75.6
BraA03t12237Z Brassica rapa HOM05D000161 ORTHO05D041164 3.0e-07 61.6 74 48.6


User provided reference genes

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