Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu034401.1 Olea europaea HOM05D006001 ORTHO05D006714 5.1e-156 554.7 347 100.0
Oeu063699.1 Olea europaea HOM05D006001 ORTHO05D006714 2.1e-117 426.4 349 67.6
Dinv42605 Davidia involucrata HOM05D006001 ORTHO05D006714 2.4e-49 200.3 363 48.8
SalBow7G4402 Salvia bowleyana HOM05D006001 ORTHO05D006714 8.1e-45 185.3 387 41.6
GSVIVG01009188001 Vitis vinifera HOM05D006001 ORTHO05D006714 8.1e-45 185.3 362 45.6
Nitab4.5_0000354g0120 Nicotiana tabacum HOM05D006001 ORTHO05D006714 2.9e-42 176.8 380 44.7
CSS0018086 Camellia sinensis var. sinensis HOM05D006001 ORTHO05D006714 1.8e-39 167.5 428 36.2
Migut.C00706 Erythranthe guttata HOM05D006001 ORTHO05D006714 1.6e-37 161.0 393 35.4
QL12p023212 Quercus lobata HOM05D006001 ORTHO05D006714 3.1e-36 156.8 365 40.5
Peaxi162Scf00160g00103 Petunia axillaris HOM05D006001 ORTHO05D006714 9.0e-36 155.2 391 36.3
SGA_v2.0_scaffold24G10238 Striga asiatica HOM05D006001 ORTHO05D006714 2.2e-34 150.6 359 35.9
Duzib128G1071 Durio zibethinus HOM05D006001 ORTHO05D006714 1.1e-33 148.3 372 39.0
CAN.G1700.2 Capsicum annuum HOM05D006001 ORTHO05D006714 3.2e-33 146.7 383 42.0
QL09p017955 Quercus lobata HOM05D006001 ORTHO05D006714 7.1e-33 145.6 362 41.2
Thecc.08G071800 Theobroma cacao HOM05D006001 ORTHO05D006714 1.2e-32 144.8 370 35.9
TAR381G0479 Trochodendron aralioides HOM05D006001 ORTHO05D006714 6.1e-32 142.5 357 41.2
Rhsim07G0212300 Rhododendron simsii HOM05D006001 ORTHO05D006714 1.8e-31 141.0 451 32.6
SGA_v2.0_scaffold20G09128 Striga asiatica HOM05D006001 ORTHO05D006714 2.3e-31 140.6 361 34.9
Manes.18G058066 Manihot esculenta HOM05D006001 ORTHO05D006714 3.0e-31 140.2 350 35.7
PGSC0003DMG400002050 Solanum tuberosum HOM05D006001 ORTHO05D006714 5.1e-31 139.4 383 41.5
Actinidia19626 Actinidia chinensis HOM05D006001 ORTHO05D006714 7.4e-30 135.6 426 35.2
Ciclev10001506m.g Citrus clementina HOM05D006001 ORTHO05D006714 1.3e-29 134.8 396 36.6
DCAR_023481 Daucus carota HOM05D006001 ORTHO05D006714 2.4e-28 130.6 435 36.3
Cfa013804 Carpinus fangiana HOM05D006001 ORTHO05D006714 3.1e-28 130.2 402 33.3
Sopen12g030020 Solanum pennellii HOM05D006001 ORTHO05D006714 3.1e-28 130.2 389 39.8
Haze_22468 Corylus avellana HOM05D006001 ORTHO05D006714 2.6e-27 127.1 382 39.3
unitig_578.g16728 Utricularia gibba HOM05D006001 ORTHO05D006714 3.4e-27 126.7 385 32.5
Cc00_g15770 Coffea canephora HOM05D006001 ORTHO05D006714 1.0e-26 125.2 367 33.2
Eucgr.H00032 Eucalyptus grandis HOM05D006001 ORTHO05D006714 1.7e-26 124.4 382 33.5
Eucgr.L02666 Eucalyptus grandis HOM05D006001 ORTHO05D006714 1.7e-26 124.4 382 33.5
COL.COLO4_35255 Corchorus olitorius HOM05D006001 ORTHO05D006714 3.8e-26 123.2 362 37.3
Duzib106G1137 Durio zibethinus HOM05D006001 ORTHO05D006714 3.8e-26 123.2 376 38.3
CiPaw.03G148200 Carya illinoinensis HOM05D006001 ORTHO05D006714 6.5e-26 122.5 384 33.9
Nitab4.5_0019796g0010 Nicotiana tabacum HOM05D006001 ORTHO05D006714 5.5e-25 119.4 241 47.7
CiPaw.07G164600 Carya illinoinensis HOM05D006001 ORTHO05D006714 1.2e-24 118.2 374 36.9
Nn6g34170 Nelumbo nucifera HOM05D006001 ORTHO05D006714 7.9e-24 115.5 360 39.4
Atru.chr13.1002 Acer truncatum HOM05D006001 ORTHO05D006714 1.4e-23 114.8 361 33.5
Haze_22467 Corylus avellana HOM05D006001 ORTHO05D006714 2.3e-23 114.0 383 34.2
Sopen04g030170 Solanum pennellii HOM05D006001 ORTHO05D006714 8.8e-23 112.1 356 33.1
Sc04g0007160 Simmondsia chinensis HOM05D006001 ORTHO05D006714 2.0e-22 110.9 346 31.2
PGSC0003DMG400009339 Solanum tuberosum HOM05D006001 ORTHO05D006714 7.4e-22 109.0 355 33.5
Solyc04g076410.3 Solanum lycopersicum HOM05D006001 ORTHO05D006714 2.2e-21 107.5 356 33.7
Prupe.1G533200 Prunus persica HOM05D006001 ORTHO05D006714 2.8e-21 107.1 436 29.8
Cpa.g.c29936.2 Carica papaya HOM05D006001 ORTHO05D006714 3.7e-21 106.7 389 32.1
Potri.002G111500 Populus trichocarpa HOM05D006001 ORTHO05D006714 3.7e-21 106.7 385 32.2
arahy.Tifrunner.gnm1.ann1.5459VI Arachis hypogaea HOM05D006001 ORTHO05D006714 4.8e-21 106.3 356 29.8
A01p15870 Brassica napus HOM05D002298 ORTHO05D006714 6.3e-21 105.9 355 32.1
Gorai.009G346500 Gossypium raimondii HOM05D006001 ORTHO05D006714 2.4e-20 104.0 371 31.8
Gohir.D05G322800 Gossypium hirsutum HOM05D006001 ORTHO05D006714 4.1e-20 103.2 377 31.6
Gohir.A05G320600 Gossypium hirsutum HOM05D006001 ORTHO05D006714 5.3e-20 102.8 372 30.9
Potri.005G153300 Populus trichocarpa HOM05D006001 ORTHO05D006714 6.9e-20 102.4 379 32.2
ClCG09G016810 Citrullus lanatus HOM05D006001 ORTHO05D006714 9.1e-20 102.1 373 31.6
CsaV3_2G036230 Cucumis sativus L. HOM05D006001 ORTHO05D006714 9.1e-20 102.1 358 31.8
Sabra02G0088000 Salix brachista HOM05D006001 ORTHO05D006714 2.0e-19 100.9 371 32.3
TWI56G0486 Tripterygium wilfordii HOM05D006001 ORTHO05D006714 3.4e-19 100.1 376 34.3
CANSAT11G1699 Cannabis sativa HOM05D006001 ORTHO05D006714 5.9e-19 99.4 352 33.2
arahy.Tifrunner.gnm1.ann1.X0SJ4P Arachis hypogaea HOM05D006001 ORTHO05D006714 1.0e-18 98.6 368 29.3
BcaC09g50862 Brassica carinata HOM05D006001 ORTHO05D006714 1.0e-18 98.6 370 32.4
TWI12G0152 Tripterygium wilfordii HOM05D006001 ORTHO05D006714 1.3e-18 98.2 337 35.0
MELO3C021835.2 Cucumis melo HOM05D006001 ORTHO05D006714 1.7e-18 97.8 381 31.8
Glyma.02G215100 Glycine max HOM05D006001 ORTHO05D006714 2.9e-18 97.1 360 35.6
Lj4A738G22 Lonicera japonica HOM05D006001 ORTHO05D006714 2.9e-18 97.1 409 36.4
MELO3C008828.2 Cucumis melo HOM05D006001 ORTHO05D006714 3.8e-18 96.7 377 30.0
BraA01t01521Z Brassica rapa HOM05D002298 ORTHO05D006714 1.4e-17 94.7 363 32.0
C01p19810 Brassica napus HOM05D002298 ORTHO05D006714 1.9e-17 94.4 365 32.6
Sp7g22490 Schrenkiella parvula HOM05D006001 ORTHO05D006714 2.5e-17 94.0 351 30.8
BolC1t01909H Brassica oleracea HOM05D002298 ORTHO05D006714 5.5e-17 92.8 372 32.0
CARHR231890 Cardamine hirsuta HOM05D006001 ORTHO05D006714 7.2e-17 92.4 371 29.4
PSO210G5625 Papaver somniferum HOM05D006001 ORTHO05D006714 9.4e-17 92.0 352 32.1
Psat2g065160 Pisum sativum HOM05D006001 ORTHO05D006714 9.4e-17 92.0 370 33.5
PGR042G0630 Punica granatum HOM05D006001 ORTHO05D006714 9.4e-17 92.0 377 30.0
MBI16_g12475_MAGBIO Magnolia biondii HOM05D006001 ORTHO05D006714 1.2e-16 91.7 372 29.8
Medtr5g066450 Medicago truncatula HOM05D006001 ORTHO05D006714 1.6e-16 91.3 357 29.7
PSO170G4643 Papaver somniferum HOM05D006001 ORTHO05D006714 1.6e-16 91.3 348 35.9
Thhalv10025760m.g Eutrema salsugineum HOM05D006001 ORTHO05D006714 7.9e-16 89.0 356 29.5
TAR376G0788 Trochodendron aralioides HOM05D006001 ORTHO05D006714 1.4e-15 88.2 249 30.5
AT4G24500 Arabidopsis thaliana HOM05D006001 ORTHO05D006714 3.0e-15 87.0 359 29.0
Solyc12g087990.3 Solanum lycopersicum HOM05D006001 ORTHO05D006714 1.5e-14 84.7 229 34.9
BcaC06g32880 Brassica carinata HOM05D006001 ORTHO05D006714 2.0e-14 84.3 352 29.5
Hund26817 Selenicereus undatus HOM05D006001 ORTHO05D006714 2.0e-14 84.3 358 32.7
Lsat_1_v5_gn_3_133380 Lactuca sativa HOM05D006001 ORTHO05D006714 4.4e-14 83.2 364 29.7
THA.LOC104806890 Tarenaya hassleriana HOM05D006001 ORTHO05D006714 5.7e-14 82.8 357 32.8
Aqoxy5G01371 Aquilegia oxysepala HOM05D006001 ORTHO05D006714 7.4e-14 82.4 452 31.0
Carub.0007s1657 Capsella rubella HOM05D006001 ORTHO05D006714 2.2e-13 80.9 352 31.2
Glyma.14G182400 Glycine max HOM05D006001 ORTHO05D006714 4.8e-13 79.7 376 33.5
HanXRQChr03g0093751 Helianthus annuus HOM05D006001 ORTHO05D006714 6.3e-13 79.3 370 33.8
BolC7t45854H Brassica oleracea HOM05D006001 ORTHO05D006714 8.2e-13 79.0 361 31.3
Aa31LG4G9600 Aethionema arabicum HOM05D006001 ORTHO05D006714 1.1e-12 78.6 366 28.1
A03p55330 Brassica napus HOM05D006001 ORTHO05D006714 4.1e-12 76.6 362 29.3
Nn5g29866 Nelumbo nucifera HOM05D006001 ORTHO05D006714 7.0e-12 75.9 303 36.6
AL7G28720 Arabidopsis lyrata HOM05D006001 ORTHO05D006714 9.1e-12 75.5 350 28.0
MD08G1199700 Malus domestica HOM05D006001 ORTHO05D006714 2.0e-11 74.3 384 25.5
HPP92_021096 Vanilla planifolia HOM05D006001 ORTHO05D006714 3.5e-11 73.6 364 29.4
BraA03t14592Z Brassica rapa HOM05D006001 ORTHO05D006714 4.5e-11 73.2 360 28.3
LjContig00408g0013719 Lotus japonicus HOM05D006001 ORTHO05D006714 4.5e-11 73.2 379 31.9
Sed0021655 Sechium edule HOM05D006001 ORTHO05D006714 1.0e-10 72.0 90 52.2
Sed0021215 Sechium edule HOM05D006001 ORTHO05D006714 2.9e-10 70.5 100 47.0
TPR.G34712 Trifolium pratense HOM05D006001 ORTHO05D006714 6.5e-10 69.3 385 26.5
SEGI_15482 Sequoiadendron giganteum HOM05D006001 ORTHO05D006714 8.5e-10 68.9 97 47.4
Ca_05452_v3 Cicer arietinum L. HOM05D006001 ORTHO05D006714 1.5e-09 68.2 371 27.8
ATR0767G016 Amborella trichopoda HOM05D006001 ORTHO05D006714 1.9e-09 67.8 387 31.8
CDE06G1720 Ceratophyllum demersum HOM05D006001 ORTHO05D006714 2.5e-09 67.4 90 50.0
CDE04G0496 Ceratophyllum demersum HOM05D006001 ORTHO05D006714 4.2e-09 66.6 365 29.0
DCAR_002596 Daucus carota HOM05D006001 ORTHO05D006714 2.1e-08 64.3 85 52.9
FAN08G3160 Fragaria x ananassa HOM05D006001 ORTHO05D006714 2.7e-08 63.9 447 26.8
HanXRQChr13g0425671 Helianthus annuus HOM05D006001 ORTHO05D006714 2.7e-08 63.9 90 45.6
Phvul.008G182500 Phaseolus vulgaris HOM05D006001 ORTHO05D006714 4.7e-08 63.2 400 27.8
DCAR_000919 Daucus carota HOM05D006001 ORTHO05D006714 8.0e-08 62.4 85 51.8
Nitab4.5_0000131g0110 Nicotiana tabacum HOM05D006001 ORTHO05D006714 8.0e-08 62.4 197 32.5
C07p53620 Brassica napus HOM05D006001 ORTHO05D006714 2.3e-07 60.8 94 45.7
Lalb_Chr17g0344581 Lupinus albus HOM05D006001 ORTHO05D006714 2.3e-07 60.8 347 31.1
HanXRQChr13g0425001 Helianthus annuus HOM05D006001 ORTHO05D006714 4.0e-07 60.1 78 51.3
SHI11238 Sapria himalayana HOM05D006001 ORTHO05D006714 5.2e-07 59.7 87 44.8
HanXRQChr13g0425801 Helianthus annuus HOM05D006001 ORTHO05D006714 1.1e-06 58.5 77 48.1
VMungo1127G1493 Vigna mungo HOM05D006001 ORTHO05D006714 3.3e-06 57.0 112 38.4
RcHm_v2.0_Chr7g0235791 Rosa chinensis HOM05D006001 ORTHO05D006714 5.7e-06 56.2 440 24.8
ECA240G2279 Erigeron canadensis HOM05D006001 ORTHO05D006714 7.5e-06 55.8 382 28.8


User provided reference genes

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