Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu034357.1 Olea europaea HOM05D006439 ORTHO05D008152 0.0e+00 1916.0 950 100.0
Migut.L01768 Erythranthe guttata HOM05D006439 ORTHO05D008152 1.1e-264 917.1 975 52.7
Hma1.2p1_0232F.1_g097640 Hydrangea macrophylla HOM05D006439 ORTHO05D008152 5.3e-264 914.8 1014 50.1
GSVIVG01033817001 Vitis vinifera HOM05D006439 ORTHO05D008152 1.8e-259 899.8 1022 49.6
Sopen10g035010 Solanum pennellii HOM05D006439 ORTHO05D008152 1.4e-248 863.6 1002 49.0
Solyc10g085600.2 Solanum lycopersicum HOM05D006439 ORTHO05D008152 4.2e-245 852.0 1002 48.5
QL07p039851 Quercus lobata HOM05D006439 ORTHO05D008152 1.4e-240 837.0 1015 48.2
SGA_v2.0_scaffold184G39949 Striga asiatica HOM05D006439 ORTHO05D008152 7.7e-239 831.2 1082 45.5
Prupe.7G115000 Prunus persica HOM05D006439 ORTHO05D008152 2.3e-235 819.7 1006 47.1
Lj1g0012097 Lotus japonicus HOM05D006439 ORTHO05D008152 2.6e-234 816.2 1017 45.7
CiPaw.09G010200 Carya illinoinensis HOM05D006439 ORTHO05D008152 7.5e-234 814.7 1006 45.8
Cfa016567 Carpinus fangiana HOM05D006439 ORTHO05D008152 4.9e-233 812.0 1012 47.3
Cc06_g05440 Coffea canephora HOM05D006439 ORTHO05D008152 4.9e-233 812.0 934 49.7
Psat3g034720 Pisum sativum HOM05D006439 ORTHO05D008152 9.2e-232 807.7 1015 45.9
MD12G1021400 Malus domestica HOM05D006439 ORTHO05D008152 3.5e-231 805.8 1003 46.7
Phvul.001G188000 Phaseolus vulgaris HOM05D006439 ORTHO05D008152 4.5e-231 805.4 1014 45.3
FAN02G3052 Fragaria x ananassa HOM05D006439 ORTHO05D008152 5.0e-230 802.0 1060 44.4
Lalb_Chr01g0018261 Lupinus albus HOM05D006439 ORTHO05D008152 6.6e-230 801.6 1011 45.9
Glyma.03G192900 Glycine max HOM05D006439 ORTHO05D008152 7.3e-229 798.1 1014 44.8
Gorai.007G371000 Gossypium raimondii HOM05D006439 ORTHO05D008152 1.1e-224 784.3 1008 45.5
TPR.G19544 Trifolium pratense HOM05D006439 ORTHO05D008152 8.6e-222 774.6 1012 44.0
Peaxi162Scf00146g00718 Petunia axillaris HOM05D006439 ORTHO05D008152 8.0e-220 768.1 958 46.3
TWI74G0883 Tripterygium wilfordii HOM05D006439 ORTHO05D008152 6.8e-219 765.0 1008 44.9
Medtr7g104170 Medicago truncatula HOM05D006439 ORTHO05D008152 1.2e-218 764.2 1012 43.9
arahy.Tifrunner.gnm1.ann1.YQ8CLY Arachis hypogaea HOM05D006439 ORTHO05D008152 2.4e-216 756.5 1040 42.8
arahy.Tifrunner.gnm1.ann1.JQB9X3 Arachis hypogaea HOM05D006439 ORTHO05D008152 3.6e-212 742.7 1045 42.4
Manes.08G022900 Manihot esculenta HOM05D006439 ORTHO05D008152 1.1e-211 741.1 1009 44.2
Gohir.A11G321900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 2.7e-207 726.5 949 45.0
SalBow5G0766 Salvia bowleyana HOM05D006439 ORTHO05D008152 6.6e-206 721.8 798 51.1
FAN14G3294 Fragaria x ananassa HOM05D006439 ORTHO05D008152 7.3e-205 718.4 1030 41.8
Actinidia31281 Actinidia chinensis HOM05D006439 ORTHO05D008152 3.1e-203 713.0 836 47.6
THA.LOC104823488 Tarenaya hassleriana HOM05D006439 ORTHO05D008152 5.2e-203 712.2 1002 41.5
HanXRQChr09g0247281 Helianthus annuus HOM05D006439 ORTHO05D008152 6.8e-203 711.8 1008 43.6
Nn2g14057 Nelumbo nucifera HOM05D006439 ORTHO05D008152 1.5e-202 710.7 1001 42.1
Duzib093G0471 Durio zibethinus HOM05D006439 ORTHO05D008152 9.9e-202 708.0 1018 42.5
FvH4_6g18170 Fragaria vesca HOM05D006439 ORTHO05D008152 6.4e-201 705.3 950 42.6
BcaC02g07604 Brassica carinata HOM05D006439 ORTHO05D008152 3.9e-198 696.0 1003 41.4
BolC4t28018H Brassica oleracea HOM05D006439 ORTHO05D008152 2.5e-197 693.3 1002 41.4
CARHR130670 Cardamine hirsuta HOM05D006439 ORTHO05D008152 4.8e-196 689.1 994 41.1
AL4G32530 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 4.4e-194 682.6 985 41.2
AT2G36370 Arabidopsis thaliana HOM05D006439 ORTHO05D008152 1.3e-193 681.0 985 41.5
Thhalv10017885m.g Eutrema salsugineum HOM05D006439 ORTHO05D008152 5.4e-192 675.6 934 42.4
BcaB06g28933 Brassica carinata HOM05D006439 ORTHO05D008152 7.1e-192 675.2 1043 39.6
ECA233G3232 Erigeron canadensis HOM05D006439 ORTHO05D008152 1.2e-191 674.5 987 41.8
Lsat_1_v5_gn_6_69500 Lactuca sativa HOM05D006439 ORTHO05D008152 1.2e-191 674.5 928 43.2
Haze_19565 Corylus avellana HOM05D006439 ORTHO05D008152 2.3e-190 670.2 1015 42.1
Gohir.D11G340900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 1.5e-189 667.5 878 44.9
BraA04t18280Z Brassica rapa HOM05D006439 ORTHO05D008152 1.3e-188 664.5 944 40.5
A04p27880 Brassica napus HOM05D006439 ORTHO05D008152 3.6e-188 662.9 943 40.9
PSO384G3820 Papaver somniferum HOM05D006439 ORTHO05D008152 4.3e-181 639.4 1015 39.4
Sc07g0005420 Simmondsia chinensis HOM05D006439 ORTHO05D008152 6.2e-180 635.6 893 42.8
CAN.G1099.9 Capsicum annuum HOM05D006439 ORTHO05D008152 4.0e-179 632.9 784 46.9
EL10Ac7g16960 Beta vulgaris HOM05D006439 ORTHO05D008152 4.5e-178 629.4 918 40.7
RcHm_v2.0_Chr3g0472491 Rosa chinensis HOM05D006439 ORTHO05D008152 5.8e-178 629.0 773 47.1
Aa31LG5G21550 Aethionema arabicum HOM05D006439 ORTHO05D008152 2.2e-177 627.1 1005 39.5
Ca_08981_v3 Cicer arietinum L. HOM05D006439 ORTHO05D008152 1.1e-165 588.2 800 43.8
Sp4g18660 Schrenkiella parvula HOM05D006439 ORTHO05D008152 2.9e-161 573.5 797 42.3
Nitab4.5_0000381g0240 Nicotiana tabacum HOM05D006439 ORTHO05D008152 1.1e-157 561.6 862 40.8
AUR62028585 Chenopodium quinoa HOM05D006439 ORTHO05D008152 6.3e-156 555.8 923 36.6
Thecc.05G084500 Theobroma cacao HOM05D006439 ORTHO05D008152 3.1e-155 553.5 595 50.6
Os01g0968600 Oryza sativa ssp. japonica HOM05D006439 ORTHO05D008152 2.9e-153 547.0 1002 36.1
VMungo1383G0775 Vigna mungo HOM05D006439 ORTHO05D008152 1.1e-152 545.0 601 50.2
Atru.chr8.1601 Acer truncatum HOM05D006439 ORTHO05D008152 1.1e-149 535.0 485 56.9
Cpa.g.sc5.59 Carica papaya HOM05D006439 ORTHO05D008152 1.5e-149 534.6 982 36.3
PGR142G3529 Punica granatum HOM05D006439 ORTHO05D008152 1.7e-148 531.2 819 40.8
Ah.15g091040 Amaranthus hybridus HOM05D006439 ORTHO05D008152 6.5e-145 519.2 864 37.6
Ciclev10011131m.g Citrus clementina HOM05D006439 ORTHO05D008152 8.5e-145 518.8 786 40.3
TAR623G1631 Trochodendron aralioides HOM05D006439 ORTHO05D008152 2.1e-143 514.2 513 53.6
HPP92_005462 Vanilla planifolia HOM05D006439 ORTHO05D008152 1.5e-141 508.1 964 35.8
Aqoxy2G01352 Aquilegia oxysepala HOM05D006439 ORTHO05D008152 1.3e-140 505.0 565 48.1
DCAR_009146 Daucus carota HOM05D006439 ORTHO05D008152 1.9e-136 491.1 848 36.8
vmacro08831 Vaccinium macrocarpon HOM05D006439 ORTHO05D008152 5.5e-136 489.6 670 43.1
Dinv21235 Davidia involucrata HOM05D000103 ORTHO05D008152 1.8e-134 484.6 445 58.0
Carub.0004s1817 Capsella rubella HOM05D006439 ORTHO05D008152 2.7e-127 460.7 477 51.6
Rhsim04G0133900 Rhododendron simsii HOM05D006439 ORTHO05D008152 2.0e-117 427.9 340 61.5
CSS0038647 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 1.5e-104 385.2 282 65.2
PSO801G0048 Papaver somniferum HOM05D006439 ORTHO05D008152 4.1e-99 367.1 781 34.1
MBI17_g23163_MAGBIO Magnolia biondii HOM05D006439 ORTHO05D008152 4.4e-93 347.1 779 32.6
Dinv21234 Davidia involucrata HOM05D006439 ORTHO05D008152 8.1e-87 326.2 337 50.4
Zm00001eb139990 Zea mays HOM05D006439 ORTHO05D008152 4.4e-85 320.5 611 36.0
Atru.chr8.1600 Acer truncatum HOM05D006439 ORTHO05D008152 1.7e-81 308.5 522 37.5
Lj3A1001T30 Lonicera japonica HOM05D006439 ORTHO05D008152 1.9e-75 288.5 246 59.8
Pp3c16_1040 Physcomitrium patens HOM05D006439 ORTHO05D008152 5.6e-72 276.9 955 27.9
Mapoly0116s0006 Marchantia polymorpha HOM05D006439 ORTHO05D008152 3.4e-69 267.7 938 26.1
AagrBONN_evm.TU.Sc2ySwM_117.1948 Anthoceros agrestis HOM05D006439 ORTHO05D008152 6.0e-66 256.9 882 27.0
Carub.0004s1816 Capsella rubella HOM05D006439 ORTHO05D008152 7.9e-58 229.9 333 38.7
VMungo1383G1144 Vigna mungo HOM05D006439 ORTHO05D008152 5.1e-57 227.3 273 44.0
SMO238G0046 Selaginella moellendorffii HOM05D006439 ORTHO05D008152 7.4e-56 223.4 446 32.5
Ciclev10013912m.g Citrus clementina HOM05D006439 ORTHO05D008152 1.7e-52 212.2 173 61.8
PGSC0003DMG402008399 Solanum tuberosum HOM05D006439 ORTHO05D008152 6.5e-52 210.3 171 60.2
Nitab4.5_0005447g0020 Nicotiana tabacum HOM05D006439 ORTHO05D008152 2.1e-50 205.3 345 37.7
QL07p039868 Quercus lobata HOM05D006439 ORTHO05D008152 7.9e-50 203.4 197 55.3
Lj3A1001G26 Lonicera japonica HOM05D006439 ORTHO05D008152 1.4e-46 192.6 226 50.0
QL11p044009 Quercus lobata HOM05D006439 ORTHO05D009270 5.0e-44 184.1 556 29.0
SEGI_26522 Sequoiadendron giganteum HOM05D006439 ORTHO05D000001 1.9e-43 182.2 222 43.7
RcHm_v2.0_Chr3g0472501 Rosa chinensis HOM05D006439 ORTHO05D008152 1.2e-42 179.5 208 46.2
CAN.G1099.8 Capsicum annuum HOM05D006439 ORTHO05D008152 8.8e-33 146.7 128 57.8
Nitab4.5_0000381g0270 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.0e-32 145.6 125 60.0
SEGI_37059 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 7.2e-27 127.1 137 51.1
Lj3A1001T31 Lonicera japonica HOM05D006439 ORTHO05D008152 9.4e-27 126.7 97 62.9
Aqoxy2G01351 Aquilegia oxysepala HOM05D006439 ORTHO05D008152 2.7e-26 125.2 170 39.4
FAN09G3024 Fragaria x ananassa HOM05D006439 ORTHO05D008152 3.6e-26 124.8 158 43.7
AUR62028586 Chenopodium quinoa HOM05D006439 ORTHO05D008152 6.1e-26 124.0 95 58.9
SEGI_31112 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 1.4e-25 122.9 251 34.3
TAR623G0848 Trochodendron aralioides HOM05D006439 ORTHO05D008152 8.8e-25 120.2 107 50.5
AL4G34520 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 1.3e-23 116.3 181 36.5
Lj3A1001T29 Lonicera japonica HOM05D006439 ORTHO05D008152 3.1e-22 111.7 219 36.5
CSS0006664 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 3.8e-20 104.8 92 55.4
Thecc.10G111400 Theobroma cacao HOM05D006439 ORTHO05D008152 2.5e-19 102.1 151 41.7
SEGI_02684 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 1.7e-15 89.4 102 48.0
AUR62033535 Chenopodium quinoa HOM05D006439 ORTHO05D008152 1.3e-12 79.7 70 52.9
CSS0035414 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 5.5e-11 74.3 86 45.3
ECA232G2349 Erigeron canadensis HOM05D006439 ORTHO05D008321 3.0e-09 68.6 113 42.5
AL4G34560 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 4.4e-08 64.7 133 32.3
Glyma.19G193000 Glycine max HOM05D006439 ORTHO05D046803 7.5e-08 63.9 78 46.2
CSS0045256 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 1.7e-07 62.8 53 56.6
SEGI_31670 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 1.8e-06 59.3 89 33.7
Psat6g076200 Pisum sativum HOM05D006439 ORTHO05D008152 5.4e-06 57.8 47 55.3


User provided reference genes

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