Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033300.1 Olea europaea HOM05D006955 ORTHO05D008701 7.7e-141 503.8 260 100.0
Migut.L01079 Erythranthe guttata HOM05D006955 ORTHO05D008701 4.9e-95 351.7 257 73.9
SGA_v2.0_scaffold124G33553 Striga asiatica HOM05D006955 ORTHO05D008701 3.5e-93 345.5 257 72.8
MSTRG.13515 Avicennia marina HOM05D006955 ORTHO05D008701 7.9e-93 344.4 257 73.2
SalBow8G1483 Salvia bowleyana HOM05D006955 ORTHO05D008701 3.0e-92 342.4 260 70.8
Lj3C1017T15 Lonicera japonica HOM05D006955 ORTHO05D008701 1.1e-91 340.5 260 70.4
CSS0004457 Camellia sinensis var. sinensis HOM05D006955 ORTHO05D008701 5.6e-91 338.2 260 70.4
Actinidia14871 Actinidia chinensis HOM05D006955 ORTHO05D008701 1.6e-90 336.7 260 70.0
Cc11_g10340 Coffea canephora HOM05D006955 ORTHO05D008701 8.1e-90 334.3 257 72.0
Potri.008G118800 Populus trichocarpa HOM05D006955 ORTHO05D008701 3.1e-89 332.4 260 68.1
Dinv21110 Davidia involucrata HOM05D006955 ORTHO05D008701 4.0e-89 332.0 260 70.4
Rhsim12G0082400 Rhododendron simsii HOM05D006955 ORTHO05D008701 1.5e-88 330.1 270 67.8
Actinidia16638 Actinidia chinensis HOM05D006955 ORTHO05D008701 9.9e-88 327.4 260 68.1
CANSAT56G1672 Cannabis sativa HOM05D006955 ORTHO05D008701 9.9e-88 327.4 259 67.6
Peaxi162Scf00382g00128 Petunia axillaris HOM05D006955 ORTHO05D008701 9.9e-88 327.4 260 67.7
vmacro01371 Vaccinium macrocarpon HOM05D006955 ORTHO05D008701 2.9e-87 325.9 300 63.7
Gohir.A13G053700 Gossypium hirsutum HOM05D006955 ORTHO05D008701 1.9e-86 323.2 260 67.3
Gohir.D13G071200 Gossypium hirsutum HOM05D006955 ORTHO05D008701 1.9e-86 323.2 260 67.3
Gorai.013G081500 Gossypium raimondii HOM05D006955 ORTHO05D008701 1.9e-86 323.2 260 67.3
Sp1g11840 Schrenkiella parvula HOM05D006955 ORTHO05D008701 1.9e-86 323.2 260 65.0
TWI79G1443 Tripterygium wilfordii HOM05D006955 ORTHO05D008701 5.5e-86 321.6 260 65.4
Nitab4.5_0004895g0100 Nicotiana tabacum HOM05D006955 ORTHO05D008701 2.1e-85 319.7 257 67.3
Nn3g17799 Nelumbo nucifera HOM05D006955 ORTHO05D008701 2.7e-85 319.3 260 65.8
Sabra08G0090200 Salix brachista HOM05D006955 ORTHO05D008701 4.6e-85 318.5 260 65.0
Glyma.08G260400 Glycine max HOM05D006955 ORTHO05D008701 2.3e-84 316.2 260 65.4
Haze_17460 Corylus avellana HOM05D006955 ORTHO05D008701 3.9e-84 315.5 260 65.8
COL.COLO4_07900 Corchorus olitorius HOM05D006955 ORTHO05D008701 6.7e-84 314.7 260 66.2
RcHm_v2.0_Chr4g0435501 Rosa chinensis HOM05D006955 ORTHO05D008701 8.7e-84 314.3 257 65.0
Aqoxy3G00330 Aquilegia oxysepala HOM05D006955 ORTHO05D008701 2.5e-83 312.8 260 64.6
GSVIVG01011919001 Vitis vinifera HOM05D006955 ORTHO05D008701 2.5e-83 312.8 260 66.5
Phvul.002G082400 Phaseolus vulgaris HOM05D006955 ORTHO05D008701 3.3e-83 312.4 260 64.6
Lalb_Chr17g0342031 Lupinus albus HOM05D006955 ORTHO05D008701 5.6e-83 311.6 260 64.6
Manes.14G100100 Manihot esculenta HOM05D006955 ORTHO05D008701 5.6e-83 311.6 250 67.6
TPR.G38250 Trifolium pratense HOM05D006955 ORTHO05D008701 1.3e-82 310.5 260 64.6
ECA233G4186 Erigeron canadensis HOM05D006955 ORTHO05D008701 2.8e-82 309.3 257 64.2
THA.LOC104805251 Tarenaya hassleriana HOM05D006955 ORTHO05D008701 3.7e-82 308.9 260 65.4
Prupe.1G308500 Prunus persica HOM05D006955 ORTHO05D008701 4.8e-82 308.5 256 63.3
Ca_28012_v3 Cicer arietinum L. HOM05D006955 ORTHO05D008701 6.2e-82 308.1 260 63.5
Lj2g0004168 Lotus japonicus HOM05D006955 ORTHO05D008701 1.8e-81 306.6 260 63.5
arahy.Tifrunner.gnm1.ann1.0188KY Arachis hypogaea HOM05D006955 ORTHO05D008701 3.1e-81 305.8 257 65.0
arahy.Tifrunner.gnm1.ann1.5TE0FE Arachis hypogaea HOM05D006955 ORTHO05D008701 3.1e-81 305.8 257 65.0
PSO017G5158 Papaver somniferum HOM05D006955 ORTHO05D008701 3.1e-81 305.8 260 64.2
arahy.Tifrunner.gnm1.ann1.FS5FM4 Arachis hypogaea HOM05D006955 ORTHO05D008701 5.3e-81 305.1 257 65.0
Psat2g093000 Pisum sativum HOM05D006955 ORTHO05D008701 5.3e-81 305.1 260 63.8
MELO3C012231.2 Cucumis melo HOM05D006955 ORTHO05D008701 6.9e-81 304.7 257 63.8
Eucgr.G02335 Eucalyptus grandis HOM05D006955 ORTHO05D008701 2.0e-80 303.1 260 64.6
Sed0012161 Sechium edule HOM05D006955 ORTHO05D008701 2.0e-80 303.1 260 63.8
AUR62002894 Chenopodium quinoa HOM05D006955 ORTHO05D008701 2.6e-80 302.8 260 62.7
PGR119G2132 Punica granatum HOM05D006955 ORTHO05D008701 3.4e-80 302.4 260 64.6
CsaV3_5G034170 Cucumis sativus L. HOM05D006955 ORTHO05D008701 4.5e-80 302.0 260 63.1
PSO478G1614 Papaver somniferum HOM05D006955 ORTHO05D008701 7.6e-80 301.2 260 63.1
DCAR_023669 Daucus carota HOM05D006955 ORTHO05D008701 3.8e-79 298.9 243 67.1
Sc11g0003240 Simmondsia chinensis HOM05D006955 ORTHO05D008701 4.9e-79 298.5 260 62.3
Sc11g0003300 Simmondsia chinensis HOM05D006955 ORTHO05D008701 4.9e-79 298.5 260 62.3
Atru.chr11.1296 Acer truncatum HOM05D006955 ORTHO05D008701 6.5e-79 298.1 260 60.0
Glyma.01G083100 Glycine max HOM05D006955 ORTHO05D008701 1.9e-78 296.6 261 62.5
CARHR013710 Cardamine hirsuta HOM05D006955 ORTHO05D008701 4.2e-78 295.4 260 60.4
Medtr5g055150 Medicago truncatula HOM05D006955 ORTHO05D008701 5.5e-78 295.0 260 61.9
Hund25084 Selenicereus undatus HOM05D006955 ORTHO05D008701 7.1e-78 294.7 260 61.2
VMungo1215G2393 Vigna mungo HOM05D006955 ORTHO05D008701 7.1e-78 294.7 261 62.5
FAN07G1824 Fragaria x ananassa HOM05D006955 ORTHO05D008701 9.3e-78 294.3 253 62.8
Ah.02g127040 Amaranthus hybridus HOM05D006955 ORTHO05D008701 6.0e-77 291.6 260 61.9
Thhalv10008697m.g Eutrema salsugineum HOM05D006955 ORTHO05D008701 1.3e-76 290.4 260 59.6
AL1G25090 Arabidopsis lyrata HOM05D006955 ORTHO05D008701 1.8e-76 290.0 260 60.4
FAN22G1329 Fragaria x ananassa HOM05D006955 ORTHO05D008701 2.3e-76 289.7 274 59.5
Nitab4.5_0003823g0050 Nicotiana tabacum HOM05D006955 ORTHO05D008701 2.3e-76 289.7 235 66.8
Lsat_1_v5_gn_8_38900 Lactuca sativa HOM05D006955 ORTHO05D008701 6.7e-76 288.1 240 64.6
EL10Ac6g14443 Beta vulgaris HOM05D006955 ORTHO05D008701 4.3e-75 285.4 257 60.3
TAR629G1122 Trochodendron aralioides HOM05D006955 ORTHO05D008701 1.3e-74 283.9 282 56.7
Duzib251G0691 Durio zibethinus HOM05D006955 ORTHO05D008701 1.6e-74 283.5 260 61.9
ATR0665G168 Amborella trichopoda HOM05D006955 ORTHO05D008701 2.1e-74 283.1 257 59.1
AT1G13330 Arabidopsis thaliana HOM05D006955 ORTHO05D008701 2.1e-74 283.1 260 59.2
Ciclev10032679m.g Citrus clementina HOM05D006955 ORTHO05D008701 4.8e-74 282.0 254 61.0
Aa31LG1G1480 Aethionema arabicum HOM05D006955 ORTHO05D008701 6.3e-74 281.6 257 59.5
C05p09970 Brassica napus HOM05D006955 ORTHO05D008701 1.1e-73 280.8 260 57.3
QL01p043991 Quercus lobata HOM05D006955 ORTHO05D008701 1.4e-73 280.4 257 61.9
Cpa.g.sc1.190 Carica papaya HOM05D006955 ORTHO05D008701 1.8e-73 280.0 260 60.0
BolC5t29750H Brassica oleracea HOM05D006955 ORTHO05D008701 2.4e-73 279.6 243 60.1
TAR622G0049 Trochodendron aralioides HOM05D006955 ORTHO05D008701 3.1e-73 279.3 260 60.0
Thecc.02G357700 Theobroma cacao HOM05D006955 ORTHO05D008701 9.0e-73 277.7 227 67.0
FAN12G1265 Fragaria x ananassa HOM05D006955 ORTHO05D008701 3.4e-72 275.8 265 58.9
FAN12G2251 Fragaria x ananassa HOM05D006955 ORTHO05D008701 3.4e-72 275.8 253 60.1
HanXRQChr08g0214231 Helianthus annuus HOM05D006955 ORTHO05D008701 3.4e-72 275.8 260 59.6
A06p08430 Brassica napus HOM05D006955 ORTHO05D008701 4.5e-72 275.4 260 56.5
BraA06t24039Z Brassica rapa HOM05D006955 ORTHO05D008701 4.5e-72 275.4 260 56.5
BcaC05g25057 Brassica carinata HOM05D006955 ORTHO05D008701 2.2e-71 273.1 260 56.2
BcaC05g25064 Brassica carinata HOM05D006955 ORTHO05D008701 2.2e-71 273.1 260 56.2
BolC5t29739H Brassica oleracea HOM05D006955 ORTHO05D008701 2.2e-71 273.1 260 56.2
MD16G1044800 Malus domestica HOM05D006955 ORTHO05D008701 7.2e-70 268.1 257 58.0
MD13G1044000 Malus domestica HOM05D006955 ORTHO05D008701 2.1e-69 266.5 257 58.0
AUR62035251 Chenopodium quinoa HOM05D006955 ORTHO05D008701 5.1e-68 261.9 260 56.9
Carub.0001s1306 Capsella rubella HOM05D006955 ORTHO05D008701 8.7e-68 261.2 260 55.0
ClCG05G022860 Citrullus lanatus HOM05D006955 ORTHO05D008701 8.7e-68 261.2 271 57.2
CiPaw.15G005500 Carya illinoinensis HOM05D006955 ORTHO05D008701 6.9e-65 251.5 228 62.7
Solyc05g009560.4 Solanum lycopersicum HOM05D006955 ORTHO05D008701 2.0e-64 250.0 255 55.7
Sopen05g005370 Solanum pennellii HOM05D006955 ORTHO05D008701 2.0e-64 250.0 255 55.7
HPP92_011092 Vanilla planifolia HOM05D006955 ORTHO05D008701 7.7e-64 248.1 247 55.9
SHI33974 Sapria himalayana HOM05D006955 ORTHO05D008701 3.8e-63 245.7 231 58.0
HPP92_011108 Vanilla planifolia HOM05D006955 ORTHO05D008701 4.2e-62 242.3 240 55.8
CAN.G656.28 Capsicum annuum HOM05D006955 ORTHO05D008701 2.1e-61 240.0 255 53.7
Zm00001eb216450 Zea mays HOM05D006955 ORTHO05D008701 2.8e-58 229.6 257 51.4
CDE05G2755 Ceratophyllum demersum HOM05D006955 ORTHO05D008701 8.2e-58 228.0 256 50.0
SEGI_38068 Sequoiadendron giganteum HOM05D006955 ORTHO05D008701 2.6e-56 223.0 226 55.3
Mapoly0015s0151 Marchantia polymorpha HOM05D006955 ORTHO05D008701 3.8e-55 219.2 254 46.9
SMO203G0092 Selaginella moellendorffii HOM05D006955 ORTHO05D008701 3.3e-51 206.1 240 46.2
CAN.G706.23 Capsicum annuum HOM05D006955 ORTHO05D008701 4.2e-46 189.1 217 53.0
CBR_g3130 Chara braunii HOM05D006955 ORTHO05D008701 4.2e-46 189.1 246 43.9
PGSC0003DMG402012965 Solanum tuberosum HOM05D006955 ORTHO05D008701 4.2e-46 189.1 172 59.9
CAN.G884.17 Capsicum annuum HOM05D000526 ORTHO05D000956 3.6e-37 159.5 243 44.9
Pp3c23_21510 Physcomitrium patens HOM05D006955 ORTHO05D008701 1.2e-35 154.5 221 39.8
Potri.010G127101 Populus trichocarpa HOM05D006955 ORTHO05D008701 5.9e-32 142.1 165 53.3
unitig_27.g25247 Utricularia gibba HOM05D006955 ORTHO05D008701 5.9e-32 142.1 94 73.4
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 2.6e-27 126.7 88 77.3
Cre06.g284400 Chlamydomonas reinhardtii HOM05D006955 ORTHO05D008701 4.7e-13 79.3 253 28.1
MCO07G460 Micromonas commoda HOM05D006955 ORTHO05D008701 8.0e-13 78.6 227 26.9
PRCOL_00000208 Prasinoderma coloniale HOM05D006955 ORTHO05D008701 3.5e-08 63.2 261 25.3
C05p10030 Brassica napus HOM05D006955 ORTHO05D008701 1.1e-06 58.2 35 74.3
Medtr5g055130 Medicago truncatula HOM05D002518 ORTHO05D002630 1.5e-06 57.8 108 41.7
Medtr4g007850 Medicago truncatula HOM05D003710 ORTHO05D258575 3.3e-06 56.6 93 41.9


User provided reference genes

Program Settings