Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032954.1 Olea europaea HOM05D004594 ORTHO05D005225 4.5e-67 257.7 122 100.0
Oeu044046.4 Olea europaea HOM05D004594 ORTHO05D005225 5.8e-46 187.6 91 94.5
Migut.E00588 Erythranthe guttata HOM05D004594 ORTHO05D005225 2.2e-37 159.1 92 81.5
Dinv02961 Davidia involucrata HOM05D004594 ORTHO05D005225 6.4e-37 157.5 92 77.2
SGA_v2.0_scaffold140G35452 Striga asiatica HOM05D004594 ORTHO05D005225 3.2e-36 155.2 92 77.2
Cc00_g08470 Coffea canephora HOM05D004594 ORTHO05D005225 5.4e-36 154.5 92 79.3
Nitab4.5_0000129g0280 Nicotiana tabacum HOM05D004594 ORTHO05D005225 5.4e-36 154.5 92 79.3
Nitab4.5_0001419g0070 Nicotiana tabacum HOM05D004594 ORTHO05D005225 5.4e-36 154.5 92 79.3
Peaxi162Scf00329g00617 Petunia axillaris HOM05D004594 ORTHO05D005225 9.2e-36 153.7 92 79.3
Actinidia11790 Actinidia chinensis HOM05D004594 ORTHO05D005225 1.2e-35 153.3 92 77.2
Cfa008959 Carpinus fangiana HOM05D004594 ORTHO05D005225 2.1e-35 152.5 92 77.2
Lj2g0016635 Lotus japonicus HOM05D004594 ORTHO05D005225 3.5e-35 151.8 92 75.0
Sopen04g003850 Solanum pennellii HOM05D004594 ORTHO05D005225 3.5e-35 151.8 92 77.2
CAN.G194.5 Capsicum annuum HOM05D004594 ORTHO05D005225 6.0e-35 151.0 92 77.2
DCAR_013185 Daucus carota HOM05D004594 ORTHO05D005225 6.0e-35 151.0 92 75.0
Haze_11988 Corylus avellana HOM05D004594 ORTHO05D005225 7.8e-35 150.6 92 75.0
Rhsim09G0077000 Rhododendron simsii HOM05D004594 ORTHO05D005225 7.8e-35 150.6 98 73.5
Ca_04825_v3 Cicer arietinum L. HOM05D004594 ORTHO05D005225 1.0e-34 150.2 92 71.7
Psat2g116320 Pisum sativum HOM05D004594 ORTHO05D005225 1.3e-34 149.8 92 73.9
Solyc04g008680.4 Solanum lycopersicum HOM05D004594 ORTHO05D005225 1.3e-34 149.8 92 76.1
MELO3C002967.2 Cucumis melo HOM05D004594 ORTHO05D005225 2.3e-34 149.1 92 73.9
CsaV3_5G025180 Cucumis sativus L. HOM05D004594 ORTHO05D005225 2.3e-34 149.1 92 73.9
TPR.G34709 Trifolium pratense HOM05D004594 ORTHO05D005225 2.3e-34 149.1 92 71.7
Glyma.01G051400 Glycine max HOM05D004594 ORTHO05D005225 3.0e-34 148.7 92 73.9
arahy.Tifrunner.gnm1.ann1.8R27D6 Arachis hypogaea HOM05D004594 ORTHO05D005225 6.6e-34 147.5 92 73.9
arahy.Tifrunner.gnm1.ann1.KB2NSX Arachis hypogaea HOM05D004594 ORTHO05D005225 6.6e-34 147.5 92 73.9
Ah.13g075020 Amaranthus hybridus HOM05D004594 ORTHO05D005225 8.6e-34 147.1 92 71.7
ClCG09G021930 Citrullus lanatus HOM05D004594 ORTHO05D005225 8.6e-34 147.1 92 72.8
Medtr5g042000 Medicago truncatula HOM05D004594 ORTHO05D005225 1.5e-33 146.4 92 70.7
GSVIVG01019950001 Vitis vinifera HOM05D004594 ORTHO05D005225 1.9e-33 146.0 92 72.8
TWI79G0308 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 2.5e-33 145.6 92 72.8
Glyma.02G109900 Glycine max HOM05D004594 ORTHO05D005225 3.3e-33 145.2 92 71.7
Lalb_Chr10g0098431 Lupinus albus HOM05D004594 ORTHO05D005225 5.6e-33 144.4 92 70.7
FAN22G0563 Fragaria x ananassa HOM05D004594 ORTHO05D005225 9.6e-33 143.7 92 69.6
MD16G1069300 Malus domestica HOM05D004594 ORTHO05D005225 9.6e-33 143.7 92 72.8
EL10Ac3g06731 Beta vulgaris HOM05D004594 ORTHO05D005225 1.6e-32 142.9 92 71.7
FvH4_4g31060 Fragaria vesca HOM05D004594 ORTHO05D005225 1.6e-32 142.9 92 68.5
FAN12G0764 Fragaria x ananassa HOM05D004594 ORTHO05D005225 1.6e-32 142.9 92 68.5
FAN17G1193 Fragaria x ananassa HOM05D004594 ORTHO05D005225 2.1e-32 142.5 92 68.5
CiPaw.05G132100 Carya illinoinensis HOM05D004594 ORTHO05D005225 3.6e-32 141.7 92 68.5
Ciclev10030522m.g Citrus clementina HOM05D004594 ORTHO05D005225 3.6e-32 141.7 92 68.5
ECA233G5935 Erigeron canadensis HOM05D004594 ORTHO05D005225 3.6e-32 141.7 92 69.6
CANSAT64G0453 Cannabis sativa HOM05D004594 ORTHO05D005225 6.2e-32 141.0 91 73.6
Manes.05G104800 Manihot esculenta HOM05D004594 ORTHO05D005225 6.2e-32 141.0 92 67.4
TWI75G1472 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 6.2e-32 141.0 92 70.7
AUR62035342 Chenopodium quinoa HOM05D004594 ORTHO05D005225 8.1e-32 140.6 92 70.7
Duzib248G1210 Durio zibethinus HOM05D004594 ORTHO05D005225 8.1e-32 140.6 92 73.9
Eucgr.G02485 Eucalyptus grandis HOM05D004594 ORTHO05D005225 8.1e-32 140.6 92 69.6
HanXRQChr08g0224741 Helianthus annuus HOM05D004594 ORTHO05D005225 1.1e-31 140.2 92 69.6
FAN07G2218 Fragaria x ananassa HOM05D004594 ORTHO05D005225 1.4e-31 139.8 92 67.4
Prupe.1G277900 Prunus persica HOM05D004594 ORTHO05D005225 1.4e-31 139.8 92 70.7
RcHm_v2.0_Chr4g0439441 Rosa chinensis HOM05D004594 ORTHO05D005225 1.4e-31 139.8 92 68.5
Manes.01G034200 Manihot esculenta HOM05D004594 ORTHO05D005225 1.8e-31 139.4 92 66.3
Sed0022637 Sechium edule HOM05D004594 ORTHO05D005225 2.4e-31 139.0 92 69.6
Lsat_1_v5_gn_3_33900 Lactuca sativa HOM05D004594 ORTHO05D005225 3.1e-31 138.7 92 70.7
Lsat_1_v5_gn_8_32581 Lactuca sativa HOM05D004594 ORTHO05D005225 3.1e-31 138.7 92 68.5
Sc11g0002090 Simmondsia chinensis HOM05D004594 ORTHO05D005225 3.1e-31 138.7 93 67.7
Atru.chr11.1750 Acer truncatum HOM05D004594 ORTHO05D005225 4.0e-31 138.3 92 68.5
CiPaw.06G087400 Carya illinoinensis HOM05D004594 ORTHO05D005225 4.0e-31 138.3 92 68.5
AUR62035898 Chenopodium quinoa HOM05D004594 ORTHO05D005225 4.0e-31 138.3 92 70.7
Potri.010G166100 Populus trichocarpa HOM05D004594 ORTHO05D005225 5.2e-31 137.9 92 68.5
QL03p068116 Quercus lobata HOM05D004594 ORTHO05D005225 6.8e-31 137.5 92 69.6
CARHR145490 Cardamine hirsuta HOM05D004594 ORTHO05D005225 1.2e-30 136.7 92 68.5
SHI24774 Sapria himalayana HOM05D004594 ORTHO05D005225 1.2e-30 136.7 92 68.5
VMungo1215G3128 Vigna mungo HOM05D004594 ORTHO05D005225 1.2e-30 136.7 92 69.6
Cpa.g.sc25.130 Carica papaya HOM05D004594 ORTHO05D005225 1.5e-30 136.3 92 68.5
ECA246G2651 Erigeron canadensis HOM05D004594 ORTHO05D005225 1.5e-30 136.3 92 68.5
Hund25219 Selenicereus undatus HOM05D004594 ORTHO05D005225 2.0e-30 136.0 92 66.3
THA.LOC104824075 Tarenaya hassleriana HOM05D004594 ORTHO05D005225 2.6e-30 135.6 92 67.4
HanXRQChr17g0540651 Helianthus annuus HOM05D004594 ORTHO05D005225 3.4e-30 135.2 92 68.5
Thecc.02G342500 Theobroma cacao HOM05D004594 ORTHO05D005225 3.4e-30 135.2 92 70.7
Phvul.003G045700 Phaseolus vulgaris HOM05D004594 ORTHO05D005225 4.4e-30 134.8 92 68.5
TAR629G1990 Trochodendron aralioides HOM05D004594 ORTHO05D005225 4.4e-30 134.8 92 69.6
Sp2g14100 Schrenkiella parvula HOM05D004594 ORTHO05D005225 2.2e-29 132.5 92 66.3
Aa31LG2G7300 Aethionema arabicum HOM05D004594 ORTHO05D005225 3.8e-29 131.7 92 67.4
BcaC04g21505 Brassica carinata HOM05D004594 ORTHO05D005225 3.8e-29 131.7 92 66.3
A09p24110 Brassica napus HOM05D004594 ORTHO05D005225 3.8e-29 131.7 92 66.3
C09p31000 Brassica napus HOM05D004594 ORTHO05D005225 3.8e-29 131.7 92 66.3
BolC9t55959H Brassica oleracea HOM05D004594 ORTHO05D005225 3.8e-29 131.7 92 66.3
BraA09t38011Z Brassica rapa HOM05D004594 ORTHO05D005225 3.8e-29 131.7 92 66.3
PGR119G1944 Punica granatum HOM05D004594 ORTHO05D005225 3.8e-29 131.7 92 63.0
BcaB07g30683 Brassica carinata HOM05D004594 ORTHO05D005225 4.9e-29 131.3 92 66.3
AL5G12800 Arabidopsis lyrata HOM05D004594 ORTHO05D005225 6.4e-29 131.0 92 65.2
AT2G03150 Arabidopsis thaliana HOM05D004594 ORTHO05D005225 6.4e-29 131.0 92 65.2
Nn1g04524 Nelumbo nucifera HOM05D004594 ORTHO05D005225 8.4e-29 130.6 92 66.3
Gohir.D04G191200 Gossypium hirsutum HOM05D004594 ORTHO05D005225 1.1e-28 130.2 92 68.5
Gorai.012G186600 Gossypium raimondii HOM05D004594 ORTHO05D005225 1.1e-28 130.2 92 68.5
Carub.0005s0198 Capsella rubella HOM05D004594 ORTHO05D005225 2.4e-28 129.0 92 64.1
Gohir.1Z049516 Gossypium hirsutum HOM05D004594 ORTHO05D005225 2.4e-28 129.0 92 67.4
Thhalv10005550m.g Eutrema salsugineum HOM05D004594 ORTHO05D005225 4.2e-28 128.3 92 65.2
HanXRQChr14g0429131 Helianthus annuus HOM05D004594 ORTHO05D005225 7.1e-28 127.5 92 64.1
Sabra10G0126400 Salix brachista HOM05D004594 ORTHO05D005225 9.3e-28 127.1 119 52.9
C02p51140 Brassica napus HOM05D004594 ORTHO05D005225 2.7e-27 125.6 92 62.0
PSO013G0146 Papaver somniferum HOM05D004594 ORTHO05D005225 2.7e-27 125.6 92 64.1
PSO832G1080 Papaver somniferum HOM05D004594 ORTHO05D005225 4.6e-27 124.8 92 63.0
CDE07G1889 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 3.0e-26 122.1 93 60.2
Aqoxy3G03454 Aquilegia oxysepala HOM05D004594 ORTHO05D005225 3.9e-26 121.7 92 64.1
ATR0564G229 Amborella trichopoda HOM05D004594 ORTHO05D005225 1.5e-25 119.8 93 60.2
MBI06_g33529_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 4.3e-25 118.2 93 60.2
TAR371G0293 Trochodendron aralioides HOM05D004594 ORTHO05D005225 5.6e-25 117.9 92 65.2
CDE04G0114 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 1.6e-24 116.3 91 59.3
HPP92_001998 Vanilla planifolia HOM05D004594 ORTHO05D005225 1.6e-24 116.3 93 62.4
HanXRQChr08g0225211 Helianthus annuus HOM05D004594 ORTHO05D005225 1.5e-22 109.8 67 67.2
Rhsim04G0150600 Rhododendron simsii HOM05D004594 ORTHO05D005225 4.4e-22 108.2 72 73.6
Zm00001eb277410 Zea mays HOM05D004594 ORTHO05D005225 1.3e-21 106.7 93 53.8
Zm00001eb384230 Zea mays HOM05D004594 ORTHO05D005225 2.9e-21 105.5 93 51.6
SEGI_16638 Sequoiadendron giganteum HOM05D004594 ORTHO05D005225 6.4e-21 104.4 93 52.7
SMO172G0003 Selaginella moellendorffii HOM05D004594 ORTHO05D005225 9.6e-17 90.5 93 47.3
Mapoly0102s0024 Marchantia polymorpha HOM05D004594 ORTHO05D005225 1.6e-16 89.7 94 50.0
Pp3c4_10880 Physcomitrium patens HOM05D004594 ORTHO05D005225 8.1e-16 87.4 94 45.7
CBR_g5747 Chara braunii HOM05D004594 ORTHO05D005225 1.4e-15 86.7 96 42.7
Pp3c12_12730 Physcomitrium patens HOM05D004594 ORTHO05D005225 1.4e-15 86.7 94 46.8
MBI02_g24139_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 3.1e-15 85.5 69 60.9
AagrBONN_evm.TU.Sc2ySwM_340.1878 Anthoceros agrestis HOM05D004594 ORTHO05D005225 4.0e-15 85.1 94 45.7
MBI05_g14664_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 3.8e-13 78.6 55 61.8
A02p33260 Brassica napus HOM05D004594 ORTHO05D005225 6.4e-13 77.8 49 67.3
Lj3E852T1 Lonicera japonica HOM05D004594 ORTHO05D005225 1.4e-12 76.6 44 72.7
unitig_52.g17301 Utricularia gibba HOM05D004594 ORTHO05D005225 1.3e-10 70.1 92 43.5
Cre06.g283634 Chlamydomonas reinhardtii HOM05D004594 ORTHO05D005225 1.8e-10 69.7 106 32.1


User provided reference genes

Program Settings