Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032213.1 Olea europaea HOM05D001674 ORTHO05D008599 0.0e+00 3026.9 1647 100.0
Migut.D01672 Erythranthe guttata HOM05D001674 ORTHO05D008599 0.0e+00 1682.5 1696 60.3
MSTRG.9602 Avicennia marina HOM05D001674 ORTHO05D008599 0.0e+00 1642.5 1723 60.7
SalBow7G3498 Salvia bowleyana HOM05D001674 ORTHO05D008599 0.0e+00 1615.9 1724 58.6
Cc00_g02250 Coffea canephora HOM05D001674 ORTHO05D008599 0.0e+00 1572.8 1773 56.6
vmacro17586 Vaccinium macrocarpon HOM05D001674 ORTHO05D008599 0.0e+00 1540.4 1727 56.1
QL10p018629 Quercus lobata HOM05D001674 ORTHO05D008599 0.0e+00 1511.5 1754 57.1
GSVIVG01007917001 Vitis vinifera HOM05D001674 ORTHO05D008599 0.0e+00 1511.5 1635 56.7
CAN.G479.33 Capsicum annuum HOM05D001674 ORTHO05D008599 0.0e+00 1501.5 1720 57.5
TAR629G0913 Trochodendron aralioides HOM05D001674 ORTHO05D008599 0.0e+00 1498.8 1788 54.5
Thecc.03G096700 Theobroma cacao HOM05D001674 ORTHO05D008599 0.0e+00 1493.8 1757 55.4
SGA_v2.0_scaffold3G01735 Striga asiatica HOM05D001674 ORTHO05D008599 0.0e+00 1493.0 1733 54.2
Sopen03g034510 Solanum pennellii HOM05D001674 ORTHO05D008599 0.0e+00 1475.7 1707 57.2
Ciclev10018469m.g Citrus clementina HOM05D001674 ORTHO05D008599 0.0e+00 1473.0 1730 56.0
Duzib068G0733 Durio zibethinus HOM05D001674 ORTHO05D008599 0.0e+00 1473.0 1750 54.9
COL.COLO4_36885 Corchorus olitorius HOM05D001674 ORTHO05D008599 0.0e+00 1471.8 1743 55.3
Nitab4.5_0004511g0020 Nicotiana tabacum HOM05D001674 ORTHO05D008599 0.0e+00 1471.1 1706 57.1
Hma1.2p1_0060F.1_g033350 Hydrangea macrophylla HOM05D001674 ORTHO05D008599 0.0e+00 1470.7 1708 56.9
Atru.chr9.280 Acer truncatum HOM05D001674 ORTHO05D008599 0.0e+00 1453.0 1766 54.5
Gorai.007G039000 Gossypium raimondii HOM05D001674 ORTHO05D008599 0.0e+00 1449.5 1748 55.1
Nn4g23353 Nelumbo nucifera HOM05D001674 ORTHO05D008599 0.0e+00 1439.1 1785 52.2
Gohir.A11G032900 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1417.5 1748 54.2
Manes.06G087600 Manihot esculenta HOM05D001674 ORTHO05D008599 0.0e+00 1399.0 1836 52.0
DCAR_031671 Daucus carota HOM05D001674 ORTHO05D008599 0.0e+00 1398.6 1762 52.7
Aqoxy3G00452 Aquilegia oxysepala HOM05D001674 ORTHO05D008599 0.0e+00 1398.3 1744 52.0
Prupe.5G200400 Prunus persica HOM05D001674 ORTHO05D008599 0.0e+00 1387.9 1763 52.8
Actinidia04849 Actinidia chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1387.1 1426 61.2
TWI15G1152 Tripterygium wilfordii HOM05D001674 ORTHO05D008599 0.0e+00 1386.7 1726 54.2
CANSAT80G0851 Cannabis sativa HOM05D001674 ORTHO05D008599 0.0e+00 1382.1 1762 53.4
PGR083G0537 Punica granatum HOM05D001674 ORTHO05D008599 0.0e+00 1378.2 1746 51.6
Sabra12G0048200 Salix brachista HOM05D001674 ORTHO05D008599 0.0e+00 1370.5 1928 49.5
MELO3C017205.2 Cucumis melo HOM05D001674 ORTHO05D008599 0.0e+00 1349.7 1749 51.9
Sed0027646 Sechium edule HOM05D001674 ORTHO05D008599 0.0e+00 1342.0 1735 52.6
HanXRQChr04g0107361 Helianthus annuus HOM05D001674 ORTHO05D008599 0.0e+00 1338.2 1648 52.7
ClCG06G015860 Citrullus lanatus HOM05D001674 ORTHO05D008599 0.0e+00 1333.9 1757 51.5
CsaV3_1G002700 Cucumis sativus L. HOM05D001674 ORTHO05D008599 0.0e+00 1332.0 1747 51.8
Lalb_Chr13g0302981 Lupinus albus HOM05D001674 ORTHO05D008599 0.0e+00 1331.2 1742 51.7
TPR.G2046 Trifolium pratense HOM05D001674 ORTHO05D008599 0.0e+00 1322.0 1733 52.3
VMungo1215G3312 Vigna mungo HOM05D001674 ORTHO05D008599 0.0e+00 1321.2 1744 51.3
Glyma.05G023300 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1318.5 1740 52.0
Glyma.17G076400 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1314.7 1746 51.0
ECA247G0462 Erigeron canadensis HOM05D001674 ORTHO05D008599 0.0e+00 1312.4 1658 52.2
arahy.Tifrunner.gnm1.ann1.MMN4BF Arachis hypogaea HOM05D001674 ORTHO05D008599 0.0e+00 1311.6 1756 51.8
Phvul.003G186700 Phaseolus vulgaris HOM05D001674 ORTHO05D008599 0.0e+00 1309.3 1745 50.9
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1305.4 1769 50.9
Lj4g0011824 Lotus japonicus HOM05D001674 ORTHO05D008599 0.0e+00 1305.0 1765 51.4
RcHm_v2.0_Chr7g0182421 Rosa chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1305.0 1751 50.8
Psat4g048680 Pisum sativum HOM05D001674 ORTHO05D008599 0.0e+00 1302.0 1737 52.0
FvH4_5g14340 Fragaria vesca HOM05D001674 ORTHO05D008599 0.0e+00 1300.8 1748 50.9
Lsat_1_v5_gn_1_13760 Lactuca sativa HOM05D001674 ORTHO05D008599 0.0e+00 1297.0 1652 52.5
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1296.2 1746 50.7
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1296.2 1746 50.7
AUR62021608 Chenopodium quinoa HOM05D001674 ORTHO05D008599 0.0e+00 1293.1 1746 49.9
Rhsim08G0149500 Rhododendron simsii HOM05D001674 ORTHO05D008599 0.0e+00 1291.6 1506 54.8
Potri.012G066900 Populus trichocarpa HOM05D001674 ORTHO05D008599 0.0e+00 1288.1 1646 53.0
Medtr4g109230 Medicago truncatula HOM05D001674 ORTHO05D008599 0.0e+00 1285.0 1726 51.4
Eucgr.B00566 Eucalyptus grandis HOM05D001674 ORTHO05D008599 0.0e+00 1276.9 1543 55.7
AUR62008489 Chenopodium quinoa HOM05D001674 ORTHO05D008599 0.0e+00 1272.3 1791 49.1
PSO478G4640 Papaver somniferum HOM05D001674 ORTHO05D008599 0.0e+00 1272.3 1811 49.0
Hund02613 Selenicereus undatus HOM05D001674 ORTHO05D008599 0.0e+00 1271.9 1708 50.9
Haze_07676 Corylus avellana HOM05D001674 ORTHO05D008599 0.0e+00 1265.8 1551 55.2
Ca_21793_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008599 0.0e+00 1265.0 1719 51.1
PGSC0003DMG400024553 Solanum tuberosum HOM05D001674 ORTHO05D008599 0.0e+00 1250.3 1486 56.7
PSO017G4474 Papaver somniferum HOM05D001674 ORTHO05D008599 0.0e+00 1238.4 1806 48.8
Peaxi162Scf00201g00021 Petunia axillaris HOM05D001674 ORTHO05D008599 0.0e+00 1209.5 1252 62.5
Solyc03g115510.3 Solanum lycopersicum HOM05D001674 ORTHO05D008599 0.0e+00 1201.4 1255 62.0
Gohir.D11G036200 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1169.1 1247 59.7
ATR0064G082 Amborella trichopoda HOM05D001674 ORTHO05D008599 0.0e+00 1149.0 1511 51.8
Lj5A106T70 Lonicera japonica HOM05D001674 ORTHO05D008599 0.0e+00 1126.7 1250 57.6
Cpa.g.sc94.3 Carica papaya HOM05D001674 ORTHO05D008599 0.0e+00 1113.6 1264 58.5
CiPaw.11G049600 Carya illinoinensis HOM05D001674 ORTHO05D008599 0.0e+00 1105.1 1306 58.0
Dinv10682 Davidia involucrata HOM05D001674 ORTHO05D008599 0.0e+00 1099.7 983 65.2
Sc12g0006570 Simmondsia chinensis HOM05D001674 ORTHO05D008599 5.0e-310 1068.5 1401 51.2
MD14G1208500 Malus domestica HOM05D001674 ORTHO05D008599 4.7e-300 1035.4 1242 56.3
SEGI_10628 Sequoiadendron giganteum HOM05D001674 ORTHO05D008599 4.5e-295 1018.8 1758 43.4
Zm00001eb108430 Zea mays HOM05D001674 ORTHO05D008599 1.0e-294 1017.7 1512 47.6
Nitab4.5_0020510g0010 Nicotiana tabacum HOM05D001674 ORTHO05D008599 6.1e-284 981.9 1041 63.2
Actinidia09243 Actinidia chinensis HOM05D001674 ORTHO05D008599 2.0e-282 976.9 980 60.1
unitig_37.g12722 Utricularia gibba HOM05D001674 ORTHO05D008599 8.3e-273 944.9 1142 54.9
Dinv38777 Davidia involucrata HOM05D001674 ORTHO05D008599 1.4e-267 927.5 848 63.8
Ah.02g113890 Amaranthus hybridus HOM05D001674 ORTHO05D008599 3.6e-260 902.9 1432 46.4
Pp3c11_9170 Physcomitrium patens HOM05D001674 ORTHO05D008599 2.1e-244 850.5 1713 39.7
SMO117G0045 Selaginella moellendorffii HOM05D001674 ORTHO05D008599 7.1e-232 808.9 1236 47.9
Os06g0235300 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D008599 7.3e-176 622.9 1053 46.4
AagrBONN_evm.TU.Sc2ySwM_228.3354 Anthoceros agrestis HOM05D001674 ORTHO05D008599 2.0e-157 561.6 897 42.5
Dinv10683 Davidia involucrata HOM05D001674 ORTHO05D008599 5.4e-155 553.5 741 49.8
CDE07G0117 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 1.3e-137 495.7 567 54.0
CDE07G0766 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 1.5e-133 482.3 822 43.8
Actinidia09244 Actinidia chinensis HOM05D001674 ORTHO05D008599 6.2e-127 460.3 711 46.6
Pp3c1_9760 Physcomitrium patens HOM05D001674 ORTHO05D008599 1.9e-123 448.7 1174 33.6
Dinv38778 Davidia involucrata HOM05D001674 ORTHO05D008599 9.4e-99 366.7 735 40.4
Lj5A106T69 Lonicera japonica HOM05D001674 ORTHO05D008599 2.4e-86 325.5 487 46.6
Actinidia09199 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.9e-83 315.8 682 38.0
Nitab4.5_0002881g0120 Nicotiana tabacum HOM05D001674 ORTHO05D008599 8.6e-68 263.8 452 40.7
Ah.02g113880 Amaranthus hybridus HOM05D001674 ORTHO05D008599 3.2e-67 261.9 237 59.5
MD14G1208300 Malus domestica HOM05D001674 ORTHO05D008599 4.0e-57 228.4 236 54.2
Rhsim08G0149700 Rhododendron simsii HOM05D001674 ORTHO05D008599 8.6e-52 210.7 207 58.5
unitig_37.g12721 Utricularia gibba HOM05D001674 ORTHO05D008599 5.4e-46 191.4 198 56.1
PRCOL_00000483 Prasinoderma coloniale HOM05D001674 ORTHO05D008599 1.1e-41 177.2 1335 23.4
CDE07G0655 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 3.2e-38 165.6 170 55.3
Cpa.g.sc94.4 Carica papaya HOM05D001674 ORTHO05D008599 1.7e-36 159.8 146 59.6
Actinidia09211 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.6e-34 153.3 244 43.4
CBR_g23198 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-32 147.1 258 36.8
Actinidia09209 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.5e-32 146.7 165 55.2
Actinidia09203 Actinidia chinensis HOM05D001674 ORTHO05D008599 8.4e-31 141.0 133 63.2
MCO15G104 Micromonas commoda HOM05D001674 ORTHO05D008599 1.2e-26 127.1 397 26.7
CBR_g23193 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-22 113.2 106 58.5
Actinidia09202 Actinidia chinensis HOM05D001674 ORTHO05D008599 4.2e-22 112.1 198 41.4
unitig_37.g12720 Utricularia gibba HOM05D001674 ORTHO05D008599 4.3e-19 102.1 275 32.7
Cre16.g679400 Chlamydomonas reinhardtii HOM05D001674 ORTHO05D008599 2.8e-18 99.4 312 25.6
PGSC0003DMG400006818 Solanum tuberosum HOM05D001674 ORTHO05D008599 1.8e-17 96.7 152 46.7
TAR376G0971 Trochodendron aralioides HOM05D001674 ORTHO05D008599 1.5e-16 93.6 104 51.0
Psat3g111480 Pisum sativum HOM05D001026 ORTHO05D008599 6.4e-15 88.2 59 71.2
CBR_g23210 Chara braunii HOM05D000019 ORTHO05D000002 3.5e-13 82.4 61 54.1
CBR_g23187 Chara braunii HOM05D001674 ORTHO05D000353 4.6e-13 82.0 78 56.4
Migut.C00071 Erythranthe guttata HOM05D001674 ORTHO05D008599 3.2e-06 59.3 71 54.9


User provided reference genes

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