Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031158.1 Olea europaea HOM05D003706 ORTHO05D004487 2.1e-109 399.1 202 100.0
Oeu040685.1 Olea europaea HOM05D003706 ORTHO05D004487 1.2e-69 266.9 159 85.5
Dinv28848 Davidia involucrata HOM05D003706 ORTHO05D004487 2.9e-66 255.8 159 81.1
Dinv39188 Davidia involucrata HOM05D003706 ORTHO05D004487 2.9e-66 255.8 159 81.1
Dinv21679 Davidia involucrata HOM05D003706 ORTHO05D004487 1.1e-65 253.8 176 73.9
Actinidia25892 Actinidia chinensis HOM05D003706 ORTHO05D004487 1.9e-65 253.1 159 79.2
Migut.A01026 Erythranthe guttata HOM05D003706 ORTHO05D004487 2.4e-65 252.7 176 73.9
MSTRG.12138 Avicennia marina HOM05D003706 ORTHO05D004487 5.4e-65 251.5 159 79.9
SGA_v2.0_scaffold104G30203 Striga asiatica HOM05D003706 ORTHO05D004487 7.0e-65 251.1 159 78.0
Manes.01G085700 Manihot esculenta HOM05D003706 ORTHO05D004487 7.8e-64 247.7 197 67.0
Hma1.2p1_0821F.1_g224200 Hydrangea macrophylla HOM05D003706 ORTHO05D004487 1.0e-63 247.3 159 77.4
CSS0020819 Camellia sinensis var. sinensis HOM05D003706 ORTHO05D004487 1.7e-63 246.5 199 66.8
Manes.02G042700 Manihot esculenta HOM05D003706 ORTHO05D004487 3.0e-63 245.7 194 66.5
Peaxi162Scf00190g01214 Petunia axillaris HOM05D003706 ORTHO05D004487 3.0e-63 245.7 178 70.8
Potri.003G081000 Populus trichocarpa HOM05D003706 ORTHO05D004487 1.5e-62 243.4 157 77.1
CAN.G1856.6 Capsicum annuum HOM05D003706 ORTHO05D004487 4.3e-62 241.9 201 64.2
Nitab4.5_0000618g0150 Nicotiana tabacum HOM05D003706 ORTHO05D004487 4.3e-62 241.9 180 71.1
TWI15G0458 Tripterygium wilfordii HOM05D003706 ORTHO05D004487 5.6e-62 241.5 198 65.2
PGSC0003DMG400024158 Solanum tuberosum HOM05D003706 ORTHO05D004487 7.3e-62 241.1 162 74.7
Nitab4.5_0006805g0040 Nicotiana tabacum HOM05D003706 ORTHO05D004487 9.5e-62 240.7 161 74.5
PGR042G3774 Punica granatum HOM05D003706 ORTHO05D004487 9.5e-62 240.7 157 74.5
CiPaw.11G084300 Carya illinoinensis HOM05D003706 ORTHO05D004487 1.2e-61 240.4 159 76.7
Solyc06g060850.3 Solanum lycopersicum HOM05D003706 ORTHO05D004487 1.2e-61 240.4 162 74.7
Sopen06g021000 Solanum pennellii HOM05D003706 ORTHO05D004487 1.2e-61 240.4 162 74.7
CANSAT21G1120 Cannabis sativa HOM05D003706 ORTHO05D004487 1.6e-61 240.0 157 75.2
Prupe.5G061500 Prunus persica HOM05D003706 ORTHO05D004487 2.1e-61 239.6 157 77.1
Cc08_g11880 Coffea canephora HOM05D003706 ORTHO05D004487 3.6e-61 238.8 160 75.0
GSVIVG01004795001 Vitis vinifera HOM05D003706 ORTHO05D004487 3.6e-61 238.8 198 64.6
Lalb_Chr05g0214291 Lupinus albus HOM05D003706 ORTHO05D004487 6.2e-61 238.0 162 70.4
Nitab4.5_0002206g0070 Nicotiana tabacum HOM05D003706 ORTHO05D004487 6.2e-61 238.0 180 70.0
Sabra03G0052000 Salix brachista HOM05D003706 ORTHO05D004487 6.2e-61 238.0 157 76.4
SalBow7G0213 Salvia bowleyana HOM05D003706 ORTHO05D004487 6.2e-61 238.0 159 74.8
Glyma.05G063800 Glycine max HOM05D003706 ORTHO05D004487 1.1e-60 237.3 195 64.6
Glyma.17G145500 Glycine max HOM05D003706 ORTHO05D004487 1.4e-60 236.9 195 64.6
Phvul.003G223748 Phaseolus vulgaris HOM05D003706 ORTHO05D004487 1.8e-60 236.5 194 62.9
QL12p009718 Quercus lobata HOM05D003706 ORTHO05D004487 1.8e-60 236.5 157 73.9
TAR629G3078 Trochodendron aralioides HOM05D003706 ORTHO05D004487 1.8e-60 236.5 199 62.8
Lalb_Chr16g0386511 Lupinus albus HOM05D003706 ORTHO05D004487 2.3e-60 236.1 190 64.7
Nitab4.5_0009301g0040 Nicotiana tabacum HOM05D003706 ORTHO05D004487 3.1e-60 235.7 167 73.1
TAR636G2892 Trochodendron aralioides HOM05D003706 ORTHO05D004487 5.2e-60 235.0 157 73.9
Atru.chr9.1245 Acer truncatum HOM05D003706 ORTHO05D004487 8.9e-60 234.2 157 72.6
Eucgr.E00375 Eucalyptus grandis HOM05D003706 ORTHO05D004487 8.9e-60 234.2 195 62.6
Gohir.D08G185500 Gossypium hirsutum HOM05D003706 ORTHO05D004487 8.9e-60 234.2 197 63.5
Lj4g0012322 Lotus japonicus HOM05D003706 ORTHO05D004487 8.9e-60 234.2 200 62.5
PSO782G4370 Papaver somniferum HOM05D003706 ORTHO05D004487 8.9e-60 234.2 155 72.3
COL.COLO4_10024 Corchorus olitorius HOM05D003706 ORTHO05D004487 1.2e-59 233.8 157 72.6
Glyma.01G206200 Glycine max HOM05D003706 ORTHO05D004487 1.2e-59 233.8 154 75.3
Lalb_Chr05g0221021 Lupinus albus HOM05D003706 ORTHO05D004487 1.2e-59 233.8 190 63.2
QL12p009287 Quercus lobata HOM05D003706 ORTHO05D004487 1.2e-59 233.8 157 73.2
CAN.G62.15 Capsicum annuum HOM05D003706 ORTHO05D004487 1.5e-59 233.4 158 73.4
THA.LOC104813337 Tarenaya hassleriana HOM05D003706 ORTHO05D004487 1.5e-59 233.4 159 74.8
Gohir.D12G216800 Gossypium hirsutum HOM05D003706 ORTHO05D004487 2.0e-59 233.0 198 62.1
Gorai.008G232400 Gossypium raimondii HOM05D003706 ORTHO05D004487 2.6e-59 232.6 198 62.1
Solyc08g078140.3 Solanum lycopersicum HOM05D003706 ORTHO05D004487 2.6e-59 232.6 156 75.0
Haze_07960 Corylus avellana HOM05D003706 ORTHO05D004487 3.4e-59 232.3 171 71.9
FAN04G0187 Fragaria x ananassa HOM05D003706 ORTHO05D004487 3.4e-59 232.3 154 75.3
arahy.Tifrunner.gnm1.ann1.JF7LYS Arachis hypogaea HOM05D003706 ORTHO05D004487 4.4e-59 231.9 156 73.1
arahy.Tifrunner.gnm1.ann1.MI1D26 Arachis hypogaea HOM05D003706 ORTHO05D004487 4.4e-59 231.9 156 73.1
ClCG10G002430 Citrullus lanatus HOM05D003706 ORTHO05D004487 4.4e-59 231.9 187 64.7
FAN13G2930 Fragaria x ananassa HOM05D003706 ORTHO05D004487 4.4e-59 231.9 154 75.3
Gohir.A08G166700 Gossypium hirsutum HOM05D003706 ORTHO05D004487 4.4e-59 231.9 157 73.9
Gohir.A12G214200 Gossypium hirsutum HOM05D003706 ORTHO05D004487 4.4e-59 231.9 198 62.1
Thecc.03G244800 Theobroma cacao HOM05D003706 ORTHO05D004487 4.4e-59 231.9 157 73.2
PSO063G5263 Papaver somniferum HOM05D003706 ORTHO05D004487 5.8e-59 231.5 155 71.0
Phvul.002G000300 Phaseolus vulgaris HOM05D003706 ORTHO05D004487 5.8e-59 231.5 160 71.9
Sed0008996 Sechium edule HOM05D003706 ORTHO05D004487 5.8e-59 231.5 198 63.6
vmacro00025 Vaccinium macrocarpon HOM05D003706 ORTHO05D004487 7.5e-59 231.1 156 73.7
Ciclev10023537m.g Citrus clementina HOM05D003706 ORTHO05D004487 9.8e-59 230.7 194 61.9
Duzib068G0005 Durio zibethinus HOM05D003706 ORTHO05D004487 9.8e-59 230.7 194 63.9
FAN18G2986 Fragaria x ananassa HOM05D003706 ORTHO05D004487 9.8e-59 230.7 155 74.2
RcHm_v2.0_Chr7g0204661 Rosa chinensis HOM05D003706 ORTHO05D004487 9.8e-59 230.7 154 75.3
EL10Ac5g12313 Beta vulgaris HOM05D003706 ORTHO05D004487 1.3e-58 230.3 170 66.5
Gorai.004G194900 Gossypium raimondii HOM05D003706 ORTHO05D004487 1.3e-58 230.3 157 73.9
FAN08G3606 Fragaria x ananassa HOM05D003706 ORTHO05D004487 2.2e-58 229.6 154 74.7
MBI04_g41760_MAGBIO Magnolia biondii HOM05D003706 ORTHO05D004487 2.9e-58 229.2 168 67.3
Peaxi162Scf00260g00418 Petunia axillaris HOM05D003706 ORTHO05D004487 2.9e-58 229.2 160 73.8
PGSC0003DMG400026229 Solanum tuberosum HOM05D003706 ORTHO05D004487 2.9e-58 229.2 195 62.6
HanXRQChr16g0511641 Helianthus annuus HOM05D003706 ORTHO05D004487 3.7e-58 228.8 154 74.0
Cpa.g.sc89.37 Carica papaya HOM05D003706 ORTHO05D004487 6.4e-58 228.0 161 70.2
FvH4_5g19870 Fragaria vesca HOM05D003706 ORTHO05D004487 6.4e-58 228.0 154 73.4
MD06G1051100 Malus domestica HOM05D003706 ORTHO05D004487 8.3e-58 227.6 157 72.6
BcaNung00085 Brassica carinata HOM05D003706 ORTHO05D004487 1.1e-57 227.3 158 73.4
Thhalv10026137m.g Eutrema salsugineum HOM05D003706 ORTHO05D004487 1.1e-57 227.3 158 73.4
MD04G1057500 Malus domestica HOM05D003706 ORTHO05D004487 1.1e-57 227.3 157 72.0
Lj2C226G3 Lonicera japonica HOM05D003706 ORTHO05D004487 2.4e-57 226.1 195 62.1
Aa31LG6G250 Aethionema arabicum HOM05D003706 ORTHO05D004487 3.2e-57 225.7 158 70.3
BcaC09g51635 Brassica carinata HOM05D003706 ORTHO05D004487 4.1e-57 225.3 158 72.8
BolC1t01081H Brassica oleracea HOM05D003706 ORTHO05D004487 4.1e-57 225.3 158 72.8
VMungo0251G2656 Vigna mungo HOM05D003706 ORTHO05D004487 5.4e-57 224.9 153 73.2
DCAR_000641 Daucus carota HOM05D003706 ORTHO05D004487 7.1e-57 224.6 154 72.1
AT4G17510 Arabidopsis thaliana HOM05D003706 ORTHO05D004487 9.2e-57 224.2 159 71.1
BraA03t14138Z Brassica rapa HOM05D003706 ORTHO05D004487 9.2e-57 224.2 176 67.0
Carub.0007s2389 Capsella rubella HOM05D003706 ORTHO05D004487 9.2e-57 224.2 158 72.2
AUR62007134 Chenopodium quinoa HOM05D003706 ORTHO05D004487 9.2e-57 224.2 159 69.8
BcaNung03459 Brassica carinata HOM05D003706 ORTHO05D004487 1.2e-56 223.8 176 66.5
A01p09590 Brassica napus HOM05D003706 ORTHO05D004487 1.2e-56 223.8 158 72.2
AUR62018878 Chenopodium quinoa HOM05D003706 ORTHO05D004487 1.2e-56 223.8 159 69.8
Ca_21985_v3 Cicer arietinum L. HOM05D003706 ORTHO05D004487 1.2e-56 223.8 197 61.4
Ca_21998_v3 Cicer arietinum L. HOM05D003706 ORTHO05D004487 1.2e-56 223.8 197 61.4
Ciclev10022039m.g Citrus clementina HOM05D003706 ORTHO05D004487 1.2e-56 223.8 194 60.8
Lsat_1_v5_gn_9_30321 Lactuca sativa HOM05D003706 ORTHO05D004487 1.6e-56 223.4 160 72.5
Hund14510 Selenicereus undatus HOM05D003706 ORTHO05D004487 1.6e-56 223.4 160 72.5
C07p48810 Brassica napus HOM05D003706 ORTHO05D004487 2.7e-56 222.6 176 65.9
BolC7t45389H Brassica oleracea HOM05D003706 ORTHO05D004487 2.7e-56 222.6 176 65.9
CARHR224210 Cardamine hirsuta HOM05D003706 ORTHO05D004487 2.7e-56 222.6 158 71.5
arahy.Tifrunner.gnm1.ann1.PS7EZR Arachis hypogaea HOM05D003706 ORTHO05D004487 3.5e-56 222.2 171 64.9
C01p11160 Brassica napus HOM05D003706 ORTHO05D004487 3.5e-56 222.2 158 72.2
Psat4g074200 Pisum sativum HOM05D003706 ORTHO05D004487 3.5e-56 222.2 195 62.1
A03p50490 Brassica napus HOM05D003706 ORTHO05D004487 4.6e-56 221.9 176 65.9
SGA_v2.0_scaffold199G41234 Striga asiatica HOM05D003706 ORTHO05D004487 4.6e-56 221.9 176 67.0
AL7G37120 Arabidopsis lyrata HOM05D003706 ORTHO05D004487 6.0e-56 221.5 159 70.4
BraA01t00901Z Brassica rapa HOM05D003706 ORTHO05D004487 6.0e-56 221.5 158 71.5
ECA240G2285 Erigeron canadensis HOM05D003706 ORTHO05D004487 6.0e-56 221.5 155 73.5
arahy.Tifrunner.gnm1.ann1.P7CRZW Arachis hypogaea HOM05D003706 ORTHO05D004487 7.8e-56 221.1 171 64.3
Aqoxy3G02726 Aquilegia oxysepala HOM05D003706 ORTHO05D004487 1.0e-55 220.7 157 68.2
Sp7g16650 Schrenkiella parvula HOM05D003706 ORTHO05D004487 1.3e-55 220.3 158 72.2
Duzib084G0672 Durio zibethinus HOM05D003706 ORTHO05D004487 1.7e-55 219.9 157 73.9
TPR.G10445 Trifolium pratense HOM05D003706 ORTHO05D004487 3.9e-55 218.8 192 60.4
DCAR_004606 Daucus carota HOM05D003706 ORTHO05D004487 8.6e-55 217.6 169 65.1
Medtr4g100360 Medicago truncatula HOM05D003706 ORTHO05D004487 1.1e-54 217.2 197 59.4
unitig_0.g1053 Utricularia gibba HOM05D003706 ORTHO05D004487 2.5e-54 216.1 176 64.2
Ah.07g198590 Amaranthus hybridus HOM05D003706 ORTHO05D004487 4.3e-54 215.3 159 66.0
AL7G37110 Arabidopsis lyrata HOM05D003706 ORTHO05D004487 9.5e-54 214.2 174 64.9
Carub.0007s2388 Capsella rubella HOM05D003706 ORTHO05D004487 9.5e-54 214.2 155 70.3
Lalb_Chr00c54g0413631 Lupinus albus HOM05D003706 ORTHO05D004487 2.1e-53 213.0 247 49.8
CiPaw.12G048600 Carya illinoinensis HOM05D003706 ORTHO05D004487 4.7e-53 211.8 181 65.2
Sc22g0001060 Simmondsia chinensis HOM05D003706 ORTHO05D004487 4.7e-53 211.8 143 75.5
CDE11G0530 Ceratophyllum demersum HOM05D003706 ORTHO05D004487 1.1e-52 210.7 155 66.5
vmacro00024 Vaccinium macrocarpon HOM05D003706 ORTHO05D004487 6.4e-50 201.4 210 53.8
Cfa012680 Carpinus fangiana HOM05D003706 ORTHO05D004487 1.1e-49 200.7 156 67.9
HPP92_002099 Vanilla planifolia HOM05D003706 ORTHO05D004487 4.1e-49 198.7 163 63.2
MELO3C013914.2 Cucumis melo HOM05D003706 ORTHO05D004487 5.4e-49 198.4 132 75.0
Lalb_Chr00c24g0407441 Lupinus albus HOM05D003706 ORTHO05D004487 9.2e-49 197.6 173 59.5
VMungo1215G2603 Vigna mungo HOM05D003706 ORTHO05D004487 1.2e-48 197.2 186 58.6
Rhsim02G0172600 Rhododendron simsii HOM05D003480 ORTHO05D004487 2.1e-48 196.4 139 70.5
CsaV3_3G002450 Cucumis sativus L. HOM05D003706 ORTHO05D004487 2.7e-48 196.1 149 69.1
Nn1g00853 Nelumbo nucifera HOM05D003706 ORTHO05D004487 6.0e-48 194.9 141 70.9
Zm00001eb427920 Zea mays HOM05D003706 ORTHO05D004487 3.3e-46 189.1 156 62.8
Zm00001eb186330 Zea mays HOM05D003706 ORTHO05D004487 4.3e-46 188.7 159 59.1
TPR.G4685 Trifolium pratense HOM05D003706 ORTHO05D004487 9.6e-46 187.6 178 56.2
VMungo0251G2614 Vigna mungo HOM05D003706 ORTHO05D006202 1.2e-45 187.2 136 66.9
HPP92_014688 Vanilla planifolia HOM05D003706 ORTHO05D004487 4.7e-45 185.3 176 56.2
Os02g0654500 Oryza sativa ssp. japonica HOM05D003706 ORTHO05D004487 6.2e-45 184.9 187 54.0
ATR0057G038 Amborella trichopoda HOM05D003706 ORTHO05D004487 1.1e-44 184.1 146 63.7
AagrBONN_evm.TU.Sc2ySwM_368.2205 Anthoceros agrestis HOM05D003706 ORTHO05D004487 1.8e-44 183.3 162 57.4
Zm00001eb249260 Zea mays HOM05D003706 ORTHO05D004487 1.8e-44 183.3 159 57.2
Mapoly0021s0071 Marchantia polymorpha HOM05D003706 ORTHO05D004487 6.8e-44 181.4 155 63.2
arahy.Tifrunner.gnm1.ann1.FUBR3I Arachis hypogaea HOM05D003706 ORTHO05D004487 5.8e-43 178.3 156 60.3
SMO364G0877 Selaginella moellendorffii HOM05D003706 ORTHO05D004487 9.3e-41 171.0 168 54.8
Pp3c3_8410 Physcomitrium patens HOM05D003706 ORTHO05D004487 4.6e-40 168.7 155 57.4
BcaC06g33562 Brassica carinata HOM05D003706 ORTHO05D004487 1.7e-39 166.8 114 73.7
CBR_g30854 Chara braunii HOM05D003706 ORTHO05D004487 3.0e-39 166.0 159 54.7
Cc11_g04870 Coffea canephora HOM05D003706 ORTHO05D004487 1.2e-35 154.1 113 68.1
Ciclev10024619m.g Citrus clementina HOM05D003706 ORTHO05D004487 6.4e-34 148.3 151 55.6
Actinidia02181 Actinidia chinensis HOM05D003706 ORTHO05D004487 8.4e-34 147.9 93 77.4
BcaC06g33564 Brassica carinata HOM05D003706 ORTHO05D004487 1.1e-33 147.5 149 59.1
Zm00001eb433120 Zea mays HOM05D003706 ORTHO05D004487 4.6e-32 142.1 178 45.5
SHI07667 Sapria himalayana HOM05D003706 ORTHO05D004487 3.0e-31 139.4 154 51.9
Sopen08g026630 Solanum pennellii HOM05D003706 ORTHO05D004487 1.2e-27 127.5 79 78.5
Cre03.g194250 Chlamydomonas reinhardtii HOM05D003706 ORTHO05D004487 7.6e-27 124.8 159 41.5
MCO01G147 Micromonas commoda HOM05D003706 ORTHO05D004487 5.4e-25 118.6 156 42.3
TWI15G0745 Tripterygium wilfordii HOM05D003706 ORTHO05D004487 1.8e-23 113.6 74 71.6
arahy.Tifrunner.gnm1.ann1.77EYCF Arachis hypogaea HOM05D003706 ORTHO05D004487 1.2e-19 100.9 61 73.8
Cc01_g05720 Coffea canephora HOM05D003706 ORTHO05D004487 3.4e-19 99.4 74 66.2
Cc00_g03590 Coffea canephora HOM05D003706 ORTHO05D004487 4.5e-19 99.0 82 62.2
MBI04_g33725_MAGBIO Magnolia biondii HOM05D003706 ORTHO05D004487 1.5e-14 84.0 55 67.3
RcHm_v2.0_Chr7g0214021 Rosa chinensis HOM05D003706 ORTHO05D004487 9.6e-14 81.3 59 69.5
Os04g0667500 Oryza sativa ssp. japonica HOM05D003706 ORTHO05D004487 1.8e-12 77.0 59 59.3
Zm00001eb146790 Zea mays HOM05D005629 ORTHO05D003607 1.8e-12 77.0 120 41.7
Zm00001eb389020 Zea mays HOM05D003706 ORTHO05D004487 3.1e-12 76.3 87 51.7
PRCOL_00002923 Prasinoderma coloniale HOM05D003706 ORTHO05D004487 1.5e-11 73.9 166 32.5
Zm00001eb389030 Zea mays HOM05D003706 ORTHO05D004487 2.6e-11 73.2 81 53.1
Zm00001eb296140 Zea mays HOM05D003706 ORTHO05D004487 1.0e-10 71.2 83 51.8
C07p48160 Brassica napus HOM05D003706 ORTHO05D004487 5.0e-10 68.9 73 52.1
TAR375G0973 Trochodendron aralioides HOM05D003706 ORTHO05D004487 6.5e-10 68.6 44 72.7
arahy.Tifrunner.gnm1.ann1.CH87W6 Arachis hypogaea HOM05D003706 ORTHO05D004487 4.2e-09 65.9 109 38.5
Oeu034301.1 Olea europaea HOM05D051433 ORTHO05D291066 1.9e-06 57.0 34 76.5
Os04g0546400 Oryza sativa ssp. japonica HOM05D003706 ORTHO05D004487 3.3e-06 56.2 67 49.3


User provided reference genes

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