Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031050.1 Olea europaea HOM05D005995 ORTHO05D007362 6.5e-91 337.4 175 100.0
Cc01_g14560 Coffea canephora HOM05D005995 ORTHO05D007362 5.9e-68 261.2 179 78.2
MSTRG.10034 Avicennia marina HOM05D005995 ORTHO05D007362 6.5e-67 257.7 172 79.1
Manes.17G003200 Manihot esculenta HOM05D005995 ORTHO05D007362 7.2e-66 254.2 179 76.5
CiPaw.14G056700 Carya illinoinensis HOM05D005995 ORTHO05D007362 1.2e-65 253.4 174 77.6
Haze_24375 Corylus avellana HOM05D005995 ORTHO05D007362 1.4e-64 250.0 179 76.0
Thecc.09G353200 Theobroma cacao HOM05D005995 ORTHO05D007362 1.8e-64 249.6 179 77.7
Dinv09649 Davidia involucrata HOM05D002227 ORTHO05D002337 5.2e-64 248.1 152 83.6
QL01p039263 Quercus lobata HOM05D005995 ORTHO05D007362 5.2e-64 248.1 178 75.8
Actinidia23218 Actinidia chinensis HOM05D005995 ORTHO05D007362 1.5e-63 246.5 152 82.9
GSVIVG01024692001 Vitis vinifera HOM05D005995 ORTHO05D007362 1.3e-62 243.4 179 74.9
Nn2g14523 Nelumbo nucifera HOM05D005995 ORTHO05D007362 1.7e-62 243.0 177 72.9
CSS0037016 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 2.2e-62 242.7 179 75.4
CSS0047754 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 2.2e-62 242.7 179 75.4
Potri.001G279700 Populus trichocarpa HOM05D005995 ORTHO05D007362 3.7e-62 241.9 179 72.6
Cpa.g.sc2.418 Carica papaya HOM05D005995 ORTHO05D007362 6.3e-62 241.1 175 74.9
Duzib170G0863 Durio zibethinus HOM05D005995 ORTHO05D007362 1.4e-61 240.0 180 73.9
Glyma.11G168600 Glycine max HOM05D005995 ORTHO05D007362 1.4e-61 240.0 179 72.6
Aqoxy4G02443 Aquilegia oxysepala HOM05D005995 ORTHO05D007362 2.4e-61 239.2 168 74.4
CiPaw.13G073700 Carya illinoinensis HOM05D005995 ORTHO05D007362 4.1e-61 238.4 171 73.7
VMungo0540G0986 Vigna mungo HOM05D005995 ORTHO05D007362 5.3e-61 238.0 177 71.2
Nitab4.5_0013485g0010 Nicotiana tabacum HOM05D005995 ORTHO05D007362 7.0e-61 237.7 177 75.1
Cfa011735 Carpinus fangiana HOM05D005995 ORTHO05D007362 1.2e-60 236.9 179 73.2
Phvul.006G070800 Phaseolus vulgaris HOM05D005995 ORTHO05D007362 1.2e-60 236.9 177 70.6
arahy.Tifrunner.gnm1.ann1.SCP5PP Arachis hypogaea HOM05D005995 ORTHO05D007362 3.5e-60 235.3 185 71.4
FAN25G2223 Fragaria x ananassa HOM05D005995 ORTHO05D007362 4.5e-60 235.0 178 71.3
Potri.009G074400 Populus trichocarpa HOM05D005995 ORTHO05D007362 4.5e-60 235.0 179 70.9
COL.COLO4_11080 Corchorus olitorius HOM05D005995 ORTHO05D007362 5.9e-60 234.6 177 74.6
EL10Ac3g05994 Beta vulgaris HOM05D005995 ORTHO05D007362 7.7e-60 234.2 174 74.1
AUR62023851 Chenopodium quinoa HOM05D005995 ORTHO05D007362 7.7e-60 234.2 180 71.7
Ciclev10029374m.g Citrus clementina HOM05D005995 ORTHO05D007362 1.0e-59 233.8 178 73.0
Sabra09G0056500 Salix brachista HOM05D005995 ORTHO05D007362 3.8e-59 231.9 179 70.4
CAN.G1095.10 Capsicum annuum HOM05D005995 ORTHO05D007362 5.0e-59 231.5 177 73.4
FAN21G0787 Fragaria x ananassa HOM05D005995 ORTHO05D007362 5.0e-59 231.5 178 69.7
Rhsim13G0066700 Rhododendron simsii HOM05D005995 ORTHO05D007362 5.0e-59 231.5 164 75.0
Sopen06g033540 Solanum pennellii HOM05D005995 ORTHO05D007362 5.0e-59 231.5 175 73.1
PGSC0003DMG400030447 Solanum tuberosum HOM05D005995 ORTHO05D007362 5.0e-59 231.5 175 73.1
SGA_v2.0_scaffold371G50155 Striga asiatica HOM05D005995 ORTHO05D007362 5.0e-59 231.5 166 73.5
Hund06617 Selenicereus undatus HOM05D005995 ORTHO05D007362 6.5e-59 231.1 169 75.7
Eucgr.B02232 Eucalyptus grandis HOM05D005995 ORTHO05D007362 1.1e-58 230.3 145 80.0
Duzib168G2258 Durio zibethinus HOM05D005995 ORTHO05D007362 1.9e-58 229.6 177 71.8
Gohir.A13G233500 Gossypium hirsutum HOM05D005995 ORTHO05D007362 4.2e-58 228.4 152 78.3
Solyc06g082160.4 Solanum lycopersicum HOM05D005995 ORTHO05D007362 7.2e-58 227.6 175 72.0
Ca_14969_v3 Cicer arietinum L. HOM05D005995 ORTHO05D007362 9.4e-58 227.3 174 70.7
vmacro02942 Vaccinium macrocarpon HOM05D005995 ORTHO05D007362 9.4e-58 227.3 167 71.9
Actinidia02782 Actinidia chinensis HOM05D005995 ORTHO05D007362 2.1e-57 226.1 135 84.4
FvH4_3g39150 Fragaria vesca HOM05D005995 ORTHO05D007362 2.7e-57 225.7 178 68.5
TAR131G0002 Trochodendron aralioides HOM05D005995 ORTHO05D007362 2.7e-57 225.7 173 72.3
TAR623G0738 Trochodendron aralioides HOM05D005995 ORTHO05D007362 2.7e-57 225.7 173 72.3
DCAR_015647 Daucus carota HOM05D005995 ORTHO05D007362 4.7e-57 224.9 168 73.8
RcHm_v2.0_Chr5g0070551 Rosa chinensis HOM05D005995 ORTHO05D007362 4.7e-57 224.9 178 68.5
FAN11G1452 Fragaria x ananassa HOM05D005995 ORTHO05D007362 6.1e-57 224.6 178 68.5
TAR633G2447 Trochodendron aralioides HOM05D005995 ORTHO05D007362 1.0e-56 223.8 179 70.9
FAN16G3099 Fragaria x ananassa HOM05D005995 ORTHO05D007362 1.4e-56 223.4 173 69.9
MD03G1063100 Malus domestica HOM05D005995 ORTHO05D007362 4.0e-56 221.9 182 68.1
PGR031G2980 Punica granatum HOM05D005995 ORTHO05D007362 5.2e-56 221.5 169 71.6
Lj6g0019722 Lotus japonicus HOM05D005995 ORTHO05D007362 8.8e-56 220.7 168 73.2
Medtr3g465040 Medicago truncatula HOM05D005995 ORTHO05D007362 8.8e-56 220.7 177 67.8
Glyma.18G060000 Glycine max HOM05D005995 ORTHO05D007362 2.0e-55 219.5 173 70.5
Lalb_Chr18g0051191 Lupinus albus HOM05D005995 ORTHO05D007362 4.4e-55 218.4 176 68.2
Lalb_Chr20g0114841 Lupinus albus HOM05D005995 ORTHO05D007362 4.4e-55 218.4 183 68.3
Sp6g20270 Schrenkiella parvula HOM05D005995 ORTHO05D007362 4.4e-55 218.4 176 65.9
MELO3C020526.2 Cucumis melo HOM05D005995 ORTHO05D007362 7.5e-55 217.6 179 65.9
CsaV3_1G036430 Cucumis sativus L. HOM05D005995 ORTHO05D007362 9.8e-55 217.2 179 65.4
CANSAT54G2854 Cannabis sativa HOM05D005995 ORTHO05D007362 1.3e-54 216.9 169 71.0
Gohir.D13G239100 Gossypium hirsutum HOM05D005995 ORTHO05D007362 1.3e-54 216.9 152 76.3
Gorai.013G270000 Gossypium raimondii HOM05D005995 ORTHO05D007362 1.3e-54 216.9 152 76.3
ClCG03G000500 Citrullus lanatus HOM05D005995 ORTHO05D007362 2.2e-54 216.1 179 66.5
ATR0681G053 Amborella trichopoda HOM05D005995 ORTHO05D007362 2.8e-54 215.7 169 69.2
Psat0s2070g0120 Pisum sativum HOM05D005995 ORTHO05D007362 2.8e-54 215.7 177 67.8
TPR.G32896 Trifolium pratense HOM05D005995 ORTHO05D007362 2.8e-54 215.7 178 68.0
Sed0015986 Sechium edule HOM05D005995 ORTHO05D007362 3.7e-54 215.3 178 65.2
Migut.N00147 Erythranthe guttata HOM05D005995 ORTHO05D007362 4.8e-54 214.9 174 69.0
PSO017G3188 Papaver somniferum HOM05D005995 ORTHO05D007362 4.8e-54 214.9 137 78.1
PSO170G4292 Papaver somniferum HOM05D005995 ORTHO05D007362 1.1e-53 213.8 138 78.3
AT5G58575 Arabidopsis thaliana HOM05D005995 ORTHO05D007362 1.4e-53 213.4 176 65.9
AL8G34810 Arabidopsis lyrata HOM05D005995 ORTHO05D007362 2.4e-53 212.6 176 64.2
arahy.Tifrunner.gnm1.ann1.6174C5 Arachis hypogaea HOM05D005995 ORTHO05D007362 1.6e-52 209.9 172 68.6
Thhalv10014805m.g Eutrema salsugineum HOM05D005995 ORTHO05D007362 1.6e-52 209.9 172 65.1
unitig_62.g23487 Utricularia gibba HOM05D005995 ORTHO05D007362 2.0e-52 209.5 175 68.6
Nitab4.5_0002043g0030 Nicotiana tabacum HOM05D005995 ORTHO05D007362 2.7e-52 209.1 177 66.7
Prupe.6G053100 Prunus persica HOM05D005995 ORTHO05D007362 2.7e-52 209.1 181 65.7
CARHR272410 Cardamine hirsuta HOM05D005995 ORTHO05D007362 3.5e-52 208.8 177 63.8
Carub.0008s1918 Capsella rubella HOM05D005995 ORTHO05D007362 5.9e-52 208.0 176 63.1
Peaxi162Scf00540g00015 Petunia axillaris HOM05D005995 ORTHO05D007362 7.7e-52 207.6 177 67.8
THA.LOC104799390 Tarenaya hassleriana HOM05D005995 ORTHO05D007362 1.7e-51 206.5 163 68.7
ECA248G1932 Erigeron canadensis HOM05D005995 ORTHO05D007362 6.5e-51 204.5 138 75.4
Sc06g0010410 Simmondsia chinensis HOM05D005995 ORTHO05D007362 2.5e-50 202.6 137 75.2
CDE10G1344 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 3.2e-50 202.2 174 64.9
HanXRQChr11g0334701 Helianthus annuus HOM05D005995 ORTHO05D007362 7.2e-50 201.1 133 76.7
BcaC01g06637 Brassica carinata HOM05D005995 ORTHO05D007362 2.7e-49 199.1 145 69.0
BcaB01g04505 Brassica carinata HOM05D005995 ORTHO05D007362 3.6e-49 198.7 138 71.0
A03p12120 Brassica napus HOM05D005995 ORTHO05D007362 6.1e-49 198.0 145 68.3
BraA03t10524Z Brassica rapa HOM05D005995 ORTHO05D007362 6.1e-49 198.0 145 68.3
Sabra16G0173300 Salix brachista HOM05D005995 ORTHO05D007362 6.1e-49 198.0 208 58.7
Aa31LG11G350 Aethionema arabicum HOM05D005995 ORTHO05D007362 8.0e-49 197.6 148 68.9
MBI03_g03955_MAGBIO Magnolia biondii HOM05D005995 ORTHO05D007362 1.4e-48 196.8 122 77.9
BolC3t13867H Brassica oleracea HOM05D005995 ORTHO05D007362 2.3e-48 196.1 145 67.6
MD11G1066600 Malus domestica HOM05D005995 ORTHO05D007362 5.2e-48 194.9 182 63.2
Atru.chr3.4142 Acer truncatum HOM05D005995 ORTHO05D007362 2.6e-47 192.6 233 52.8
Lsat_1_v5_gn_5_173181 Lactuca sativa HOM05D005995 ORTHO05D007362 2.6e-47 192.6 124 76.6
BcaNung06849 Brassica carinata HOM05D002227 ORTHO05D007362 1.8e-45 186.4 138 68.1
CDE10G0962 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 9.1e-45 184.1 166 65.7
Lj1P130T21 Lonicera japonica HOM05D005995 ORTHO05D007362 9.1e-45 184.1 107 86.0
MD11G1066800 Malus domestica HOM05D005995 ORTHO05D007362 1.2e-44 183.7 160 65.0
HPP92_012020 Vanilla planifolia HOM05D005995 ORTHO05D007362 2.7e-44 182.6 163 65.0
TWI79G0924 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 1.9e-42 176.4 169 60.4
MD11G1152800 Malus domestica HOM05D005995 ORTHO05D007362 2.8e-41 172.6 127 70.1
Sed0014404 Sechium edule HOM05D005995 ORTHO05D007362 2.6e-39 166.0 171 62.0
Mapoly0008s0254 Marchantia polymorpha HOM05D005995 ORTHO05D007362 1.3e-38 163.7 142 60.6
TWI31G1135 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 2.2e-38 162.9 143 62.2
SEGI_16655 Sequoiadendron giganteum HOM05D005995 ORTHO05D007362 7.0e-37 157.9 178 52.2
AUR62002337 Chenopodium quinoa HOM05D005995 ORTHO05D007362 1.6e-36 156.8 125 68.0
Os05g0351500 Oryza sativa ssp. japonica HOM05D005995 ORTHO05D007362 1.2e-33 147.1 188 48.9
Zm00001eb286290 Zea mays HOM05D005995 ORTHO05D007362 5.2e-32 141.7 166 52.4
C03p14210 Brassica napus HOM05D005995 ORTHO05D007362 1.5e-31 140.2 117 59.0
Gohir.A05G107700 Gossypium hirsutum HOM05D005995 ORTHO05D007362 2.0e-31 139.8 168 53.6
Pp3c7_14690 Physcomitrium patens HOM05D005995 ORTHO05D007362 2.0e-31 139.8 144 55.6
Gohir.D05G107900 Gossypium hirsutum HOM05D005995 ORTHO05D007362 2.4e-29 132.9 168 53.0
SMO358G0374 Selaginella moellendorffii HOM05D005995 ORTHO05D007362 3.9e-27 125.6 99 62.6
BcaC01g06639 Brassica carinata HOM05D005995 ORTHO05D007362 5.6e-26 121.7 122 55.7
AagrBONN_evm.TU.Sc2ySwM_344.2127 Anthoceros agrestis HOM05D005995 ORTHO05D007362 1.4e-24 117.1 104 57.7
Pp3c11_11530 Physcomitrium patens HOM05D001687 ORTHO05D001608 2.3e-24 116.3 129 51.9
Gorai.009G112000 Gossypium raimondii HOM05D005995 ORTHO05D007362 3.4e-23 112.5 112 57.1
MD11G1153100 Malus domestica HOM05D005995 ORTHO05D007362 8.3e-22 107.8 80 66.2
Actinidia32626 Actinidia chinensis HOM05D005995 ORTHO05D007362 3.0e-19 99.4 72 75.0
CBR_g49952 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-18 97.1 138 42.0
HPP92_013780 Vanilla planifolia HOM05D005995 ORTHO05D007362 1.4e-16 90.5 103 47.6
MD11G1071300 Malus domestica HOM05D005995 ORTHO05D007362 7.1e-13 78.2 83 59.0
Cre17.g719550 Chlamydomonas reinhardtii HOM05D005995 ORTHO05D007362 1.0e-11 74.3 173 30.6
Pp3c4_14820 Physcomitrium patens HOM05D005995 ORTHO05D311899 1.2e-07 60.8 125 35.2
MCO04G081 Micromonas commoda HOM05D005995 ORTHO05D007362 2.6e-07 59.7 123 38.2
Medtr6g460490 Medicago truncatula HOM05D005995 ORTHO05D007362 2.9e-06 56.2 35 77.1


User provided reference genes

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