Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030951.1 Olea europaea HOM05D004841 ORTHO05D005874 1.5e-68 262.7 128 100.0
Oeu030952.1 Olea europaea HOM05D004841 ORTHO05D005874 1.1e-28 130.2 83 79.5
Oeu013128.1 Olea europaea HOM05D004841 ORTHO05D005874 5.2e-21 104.8 88 61.4
unitig_749.g13802 Utricularia gibba HOM05D004841 ORTHO05D005874 1.5e-20 103.2 127 50.4
SGA_v2.0_scaffold146G36131 Striga asiatica HOM05D004841 ORTHO05D005874 2.8e-19 99.0 123 48.0
MSTRG.7507 Avicennia marina HOM05D004841 ORTHO05D005874 6.3e-19 97.8 122 47.5
Migut.M00886 Erythranthe guttata HOM05D004841 ORTHO05D005874 2.0e-17 92.8 123 45.5
PGSC0003DMG400022420 Solanum tuberosum HOM05D004841 ORTHO05D005874 7.7e-17 90.9 124 45.2
CSS0019612 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 1.3e-16 90.1 125 46.4
CSS0027900 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 1.3e-16 90.1 125 46.4
Nitab4.5_0004020g0010 Nicotiana tabacum HOM05D004841 ORTHO05D005874 1.3e-16 90.1 124 46.0
Solyc02g078830.4 Solanum lycopersicum HOM05D004841 ORTHO05D005874 1.3e-16 90.1 124 45.2
Cc02_g29720 Coffea canephora HOM05D004841 ORTHO05D005874 1.7e-16 89.7 124 44.4
Sopen02g023650 Solanum pennellii HOM05D004841 ORTHO05D005874 2.9e-16 89.0 124 44.4
Hma1.2p1_0594F.1_g185890 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 3.8e-16 88.6 124 45.2
Nitab4.5_0000501g0020 Nicotiana tabacum HOM05D004841 ORTHO05D005874 5.0e-16 88.2 124 45.2
Peaxi162Scf00465g00119 Petunia axillaris HOM05D004841 ORTHO05D005874 1.1e-15 87.0 126 48.4
Actinidia01573 Actinidia chinensis HOM05D004841 ORTHO05D005874 1.5e-15 86.7 124 45.2
HanXRQChr17g0564621 Helianthus annuus HOM05D004841 ORTHO05D005874 4.2e-15 85.1 124 44.4
Lsat_1_v5_gn_4_29561 Lactuca sativa HOM05D004841 ORTHO05D005874 5.5e-15 84.7 124 41.1
Rhsim13G0116700 Rhododendron simsii HOM05D004841 ORTHO05D005874 5.5e-15 84.7 130 45.4
Phvul.009G215400 Phaseolus vulgaris HOM05D004841 ORTHO05D005874 1.2e-14 83.6 127 44.9
Prupe.4G084200 Prunus persica HOM05D004841 ORTHO05D005874 1.2e-14 83.6 128 46.1
vmacro03353 Vaccinium macrocarpon HOM05D004841 ORTHO05D005874 1.2e-14 83.6 125 44.0
Dinv32222 Davidia involucrata HOM05D004841 ORTHO05D005874 2.1e-14 82.8 120 45.0
Lj2A321T65 Lonicera japonica HOM05D004841 ORTHO05D005874 2.1e-14 82.8 126 43.7
SalBow8G2637 Salvia bowleyana HOM05D004841 ORTHO05D005874 2.1e-14 82.8 81 50.6
QL05p055481 Quercus lobata HOM05D004841 ORTHO05D005874 4.7e-14 81.6 128 43.0
GSVIVG01034157001 Vitis vinifera HOM05D004841 ORTHO05D005874 4.7e-14 81.6 122 43.4
Cfa000914 Carpinus fangiana HOM05D004841 ORTHO05D005874 1.0e-13 80.5 128 46.1
VMungo1309G2918 Vigna mungo HOM05D004841 ORTHO05D005874 1.0e-13 80.5 127 44.9
Haze_05641 Corylus avellana HOM05D004841 ORTHO05D005874 1.4e-13 80.1 128 46.1
Potri.012G107400 Populus trichocarpa HOM05D004841 ORTHO05D005874 1.4e-13 80.1 128 43.8
Sed0021741 Sechium edule HOM05D004841 ORTHO05D005874 1.4e-13 80.1 128 41.4
arahy.Tifrunner.gnm1.ann1.0DR3QG Arachis hypogaea HOM05D004841 ORTHO05D005874 1.8e-13 79.7 125 41.6
arahy.Tifrunner.gnm1.ann1.4L8DWS Arachis hypogaea HOM05D004841 ORTHO05D005874 1.8e-13 79.7 125 41.6
arahy.Tifrunner.gnm1.ann1.9IA9LY Arachis hypogaea HOM05D004841 ORTHO05D005874 1.8e-13 79.7 125 41.6
MD05G1280700 Malus domestica HOM05D004841 ORTHO05D005874 1.8e-13 79.7 128 44.5
ClCG01G024810 Citrullus lanatus HOM05D004841 ORTHO05D005874 3.0e-13 79.0 128 40.6
Nn3g20436 Nelumbo nucifera HOM05D004841 ORTHO05D005874 3.0e-13 79.0 125 44.8
EL10Ac7g16662 Beta vulgaris HOM05D004841 ORTHO05D005874 5.2e-13 78.2 127 42.5
Psat1g020080 Pisum sativum HOM05D004841 ORTHO05D005874 5.2e-13 78.2 100 49.0
Sabra13G0019700 Salix brachista HOM05D000092 ORTHO05D005874 5.2e-13 78.2 128 43.0
MD10G1259100 Malus domestica HOM05D004841 ORTHO05D005874 6.8e-13 77.8 128 42.2
Manes.17G073300 Manihot esculenta HOM05D004841 ORTHO05D005874 8.8e-13 77.4 128 43.8
MELO3C007114.2 Cucumis melo HOM05D004841 ORTHO05D005874 1.2e-12 77.0 128 40.6
DCAR_027897 Daucus carota HOM05D004841 ORTHO05D005874 1.2e-12 77.0 128 45.3
PGR031G1170 Punica granatum HOM05D004841 ORTHO05D005874 1.2e-12 77.0 126 38.9
CsaV3_6G051930 Cucumis sativus L. HOM05D004841 ORTHO05D005874 1.5e-12 76.6 128 40.6
Ah.08g211520 Amaranthus hybridus HOM05D004841 ORTHO05D005874 2.0e-12 76.3 123 40.7
FvH4_3g05180 Fragaria vesca HOM05D004841 ORTHO05D005874 2.0e-12 76.3 131 42.7
FAN11G3214 Fragaria x ananassa HOM05D004841 ORTHO05D005874 2.0e-12 76.3 131 42.7
FAN16G1445 Fragaria x ananassa HOM05D004841 ORTHO05D005874 2.0e-12 76.3 131 42.7
FAN21G1690 Fragaria x ananassa HOM05D004841 ORTHO05D005874 2.0e-12 76.3 131 42.7
FAN25G3271 Fragaria x ananassa HOM05D004841 ORTHO05D005874 2.0e-12 76.3 131 42.7
C06p42780 Brassica napus HOM05D004841 ORTHO05D005874 2.6e-12 75.9 128 41.4
CiPaw.10G089600 Carya illinoinensis HOM05D004841 ORTHO05D005874 2.6e-12 75.9 128 43.0
Sc02g0001540 Simmondsia chinensis HOM05D004841 ORTHO05D005874 2.6e-12 75.9 127 41.7
THA.LOC104821761 Tarenaya hassleriana HOM05D004841 ORTHO05D005874 2.6e-12 75.9 130 43.8
arahy.Tifrunner.gnm1.ann1.V1DCF9 Arachis hypogaea HOM05D004841 ORTHO05D005874 4.4e-12 75.1 125 40.8
FAN16G2733 Fragaria x ananassa HOM05D004841 ORTHO05D005874 4.4e-12 75.1 131 42.0
TPR.G29935 Trifolium pratense HOM05D004841 ORTHO05D005874 5.7e-12 74.7 100 48.0
Lalb_Chr11g0073321 Lupinus albus HOM05D004841 ORTHO05D005874 7.5e-12 74.3 129 42.6
Medtr2g049300 Medicago truncatula HOM05D004841 ORTHO05D005874 7.5e-12 74.3 100 47.0
RcHm_v2.0_Chr5g0014571 Rosa chinensis HOM05D004841 ORTHO05D005874 7.5e-12 74.3 130 40.0
PSO541G1633 Papaver somniferum HOM05D004841 ORTHO05D005874 9.8e-12 73.9 129 40.3
PSO675G7289 Papaver somniferum HOM05D004841 ORTHO05D005874 9.8e-12 73.9 129 40.3
Thecc.06G146500 Theobroma cacao HOM05D004841 ORTHO05D005874 9.8e-12 73.9 131 40.5
Glyma.15G195000 Glycine max HOM05D004841 ORTHO05D005874 1.3e-11 73.6 99 47.5
CiPaw.09G120900 Carya illinoinensis HOM05D004841 ORTHO05D005874 1.7e-11 73.2 131 42.0
ECA234G4271 Erigeron canadensis HOM05D004841 ORTHO05D005874 1.7e-11 73.2 124 38.7
A02p14280 Brassica napus HOM05D004841 ORTHO05D005874 2.2e-11 72.8 130 41.5
BolC2t08451H Brassica oleracea HOM05D004841 ORTHO05D005874 2.2e-11 72.8 128 41.4
BraA02t06489Z Brassica rapa HOM05D004841 ORTHO05D005874 2.2e-11 72.8 130 41.5
CANSAT11G1247 Cannabis sativa HOM05D004841 ORTHO05D005874 2.2e-11 72.8 128 41.4
Duzib235G0160 Durio zibethinus HOM05D004841 ORTHO05D005874 2.2e-11 72.8 127 40.2
Ca_03447_v3 Cicer arietinum L. HOM05D004841 ORTHO05D005874 2.8e-11 72.4 100 47.0
Gohir.A10G042800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 3.7e-11 72.0 130 41.5
PSO017G5522 Papaver somniferum HOM05D004841 ORTHO05D005874 3.7e-11 72.0 129 39.5
Hund20587 Selenicereus undatus HOM05D004841 ORTHO05D005874 3.7e-11 72.0 129 38.8
MBI02_g29870_MAGBIO Magnolia biondii HOM05D004841 ORTHO05D005874 4.8e-11 71.6 128 45.3
HPP92_012189 Vanilla planifolia HOM05D004841 ORTHO05D005874 4.8e-11 71.6 81 48.1
Eucgr.E02427 Eucalyptus grandis HOM05D004841 ORTHO05D005874 1.1e-10 70.5 126 39.7
TWI34G1122 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 1.1e-10 70.5 125 40.8
BcaB05g24290 Brassica carinata HOM05D004841 ORTHO05D005874 1.4e-10 70.1 130 41.5
COL.COLO4_31030 Corchorus olitorius HOM05D004841 ORTHO05D005874 1.4e-10 70.1 127 37.8
Gohir.D10G043800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 1.4e-10 70.1 77 53.2
Gorai.011G046600 Gossypium raimondii HOM05D004841 ORTHO05D005874 1.4e-10 70.1 77 53.2
Lj6g0003285 Lotus japonicus HOM05D004841 ORTHO05D005874 1.4e-10 70.1 100 45.0
BcaB03g15189 Brassica carinata HOM05D004841 ORTHO05D005874 1.8e-10 69.7 130 41.5
BcaNung05075 Brassica carinata HOM05D004841 ORTHO05D005874 1.8e-10 69.7 130 41.5
C02p23090 Brassica napus HOM05D004841 ORTHO05D005874 1.8e-10 69.7 131 42.0
Glyma.09G086200 Glycine max HOM05D004841 ORTHO05D005874 1.8e-10 69.7 78 48.7
A07p34060 Brassica napus HOM05D004841 ORTHO05D005874 2.4e-10 69.3 128 39.8
C06p42730 Brassica napus HOM05D004841 ORTHO05D005874 2.4e-10 69.3 128 39.8
BolC6t39162H Brassica oleracea HOM05D004841 ORTHO05D005874 2.4e-10 69.3 128 39.8
BraA07t31032Z Brassica rapa HOM05D004841 ORTHO05D005874 2.4e-10 69.3 128 39.8
Carub.0002s1024 Capsella rubella HOM05D004841 ORTHO05D005874 2.4e-10 69.3 132 40.2
TWI63G0939 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 2.4e-10 69.3 125 41.6
Aqoxy5G03944 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 3.1e-10 68.9 126 38.1
Sp5g22530 Schrenkiella parvula HOM05D004841 ORTHO05D005874 4.1e-10 68.6 131 41.2
TAR628G1076 Trochodendron aralioides HOM05D004841 ORTHO05D005874 4.1e-10 68.6 127 40.9
Aqoxy7G03441 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 7.0e-10 67.8 126 38.1
AL2G19660 Arabidopsis lyrata HOM05D004841 ORTHO05D005874 7.0e-10 67.8 131 41.2
Atru.chr10.1099 Acer truncatum HOM05D004841 ORTHO05D005874 9.1e-10 67.4 79 53.2
Thhalv10018816m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 1.2e-09 67.0 131 42.0
AT1G65030 Arabidopsis thaliana HOM05D004841 ORTHO05D005874 1.6e-09 66.6 130 40.0
Aa31LG2G2230 Aethionema arabicum HOM05D004841 ORTHO05D005874 3.5e-09 65.5 130 39.2
CARHR056500 Cardamine hirsuta HOM05D004841 ORTHO05D005874 5.9e-09 64.7 130 38.5
Ciclev10015824m.g Citrus clementina HOM05D004841 ORTHO05D005874 5.9e-09 64.7 128 39.1
AUR62026924 Chenopodium quinoa HOM05D004841 ORTHO05D005874 2.9e-08 62.4 62 51.6
VMungo1382G0002 Vigna mungo HOM05D004841 ORTHO05D005874 3.8e-08 62.0 77 48.1
VMungo0251G1518 Vigna mungo HOM05D005230 ORTHO05D051605 6.5e-08 61.2 99 42.4
Dinv21532 Davidia involucrata HOM05D004841 ORTHO05D005874 1.1e-07 60.5 105 40.0
VMungo0720G0475 Vigna mungo HOM05D005230 ORTHO05D051605 1.5e-07 60.1 99 42.4
SEGI_08519 Sequoiadendron giganteum HOM05D004841 ORTHO05D005874 2.5e-07 59.3 89 37.1
CDE07G1158 Ceratophyllum demersum HOM05D004841 ORTHO05D005874 3.2e-07 58.9 103 41.7


User provided reference genes

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