Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030849.1 Olea europaea HOM05D000974 ORTHO05D006000 7.2e-184 647.1 329 100.0
Peaxi162Scf00011g01426 Petunia axillaris HOM05D000974 ORTHO05D006000 9.7e-165 583.6 324 88.9
PGSC0003DMG400024886 Solanum tuberosum HOM05D000974 ORTHO05D006000 4.1e-163 578.2 324 87.7
Nitab4.5_0003816g0050 Nicotiana tabacum HOM05D000974 ORTHO05D006000 2.0e-162 575.9 324 87.7
Sopen01g045790 Solanum pennellii HOM05D000974 ORTHO05D006000 7.7e-162 573.9 324 87.0
Ciclev10000877m.g Citrus clementina HOM05D000974 ORTHO05D006000 1.3e-161 573.2 324 87.3
COL.COLO4_17713 Corchorus olitorius HOM05D000974 ORTHO05D006000 2.2e-161 572.4 324 86.4
Lj5C267T12 Lonicera japonica HOM05D000974 ORTHO05D006000 2.2e-161 572.4 326 86.5
CAN.G855.13 Capsicum annuum HOM05D000974 ORTHO05D006000 2.9e-161 572.0 324 87.3
Manes.07G025100 Manihot esculenta HOM05D000974 ORTHO05D006000 2.9e-161 572.0 324 87.7
Nitab4.5_0002347g0020 Nicotiana tabacum HOM05D000974 ORTHO05D006000 5.0e-161 571.2 324 86.7
TPR.G5252 Trifolium pratense HOM05D000974 ORTHO05D006000 6.5e-161 570.9 329 85.4
MSTRG.5204 Avicennia marina HOM05D000974 ORTHO05D006000 1.1e-160 570.1 326 86.8
Solyc01g103440.3 Solanum lycopersicum HOM05D000974 ORTHO05D006000 1.1e-160 570.1 324 86.7
Thecc.02G017200 Theobroma cacao HOM05D000974 ORTHO05D006000 1.1e-160 570.1 324 87.3
Duzib052G0127 Durio zibethinus HOM05D000974 ORTHO05D006000 3.2e-160 568.5 324 86.1
Duzib132G0946 Durio zibethinus HOM05D000974 ORTHO05D006000 3.2e-160 568.5 324 86.1
Dinv29601 Davidia involucrata HOM05D000974 ORTHO05D006000 7.2e-160 567.4 324 85.8
CANSAT54G1032 Cannabis sativa HOM05D000974 ORTHO05D006000 1.6e-159 566.2 324 87.3
Potri.004G225500 Populus trichocarpa HOM05D000974 ORTHO05D006000 2.1e-159 565.8 324 87.0
Dinv19422 Davidia involucrata HOM05D000974 ORTHO05D006000 2.7e-159 565.5 324 86.1
vmacro01708 Vaccinium macrocarpon HOM05D000974 ORTHO05D006000 2.7e-159 565.5 342 82.7
DCAR_006665 Daucus carota HOM05D000974 ORTHO05D006000 3.6e-159 565.1 324 87.3
Rhsim07G0227600 Rhododendron simsii HOM05D000974 ORTHO05D006000 3.6e-159 565.1 326 86.8
CSS0025059 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D006000 4.7e-159 564.7 324 85.8
Ca_04891_v3 Cicer arietinum L. HOM05D000974 ORTHO05D006000 6.1e-159 564.3 330 85.5
Cc02_g23270 Coffea canephora HOM05D000974 ORTHO05D006000 8.0e-159 563.9 324 86.4
Rhsim07G0227800 Rhododendron simsii HOM05D000974 ORTHO05D006000 8.0e-159 563.9 326 86.5
ClCG10G007320 Citrullus lanatus HOM05D000974 ORTHO05D006000 2.3e-158 562.4 327 83.5
Cfa004480 Carpinus fangiana HOM05D000974 ORTHO05D006000 4.0e-158 561.6 328 85.7
Gorai.008G045600 Gossypium raimondii HOM05D000974 ORTHO05D006000 6.8e-158 560.8 324 85.2
Gohir.D12G043400 Gossypium hirsutum HOM05D000974 ORTHO05D006000 8.8e-158 560.5 324 84.9
Atru.chr9.317 Acer truncatum HOM05D000974 ORTHO05D006000 1.2e-157 560.1 324 85.2
GSVIVG01038784001 Vitis vinifera HOM05D000974 ORTHO05D006000 2.0e-157 559.3 330 83.9
MELO3C016483.2 Cucumis melo HOM05D000974 ORTHO05D006000 3.4e-157 558.5 327 82.3
Rhsim11G0122100 Rhododendron simsii HOM05D000974 ORTHO05D006000 4.4e-157 558.1 326 85.6
Psat2g146560 Pisum sativum HOM05D000974 ORTHO05D006000 5.7e-157 557.8 326 83.7
Cpa.g.sc113.32 Carica papaya HOM05D000974 ORTHO05D006000 7.5e-157 557.4 328 84.1
PGR142G3566 Punica granatum HOM05D000974 ORTHO05D006000 7.5e-157 557.4 324 84.9
CSS0010237 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D006000 9.8e-157 557.0 324 85.2
QL02p100861 Quercus lobata HOM05D000974 ORTHO05D006000 9.8e-157 557.0 328 85.1
CsaV3_3G006560 Cucumis sativus L. HOM05D000974 ORTHO05D006000 1.7e-156 556.2 327 82.3
Haze_10037 Corylus avellana HOM05D000974 ORTHO05D006000 2.2e-156 555.8 328 84.8
Eucgr.I02775 Eucalyptus grandis HOM05D000974 ORTHO05D006000 3.7e-156 555.1 327 83.8
Atru.chr1.4075 Acer truncatum HOM05D000974 ORTHO05D006000 4.8e-156 554.7 324 84.9
Nn5g27502 Nelumbo nucifera HOM05D000974 ORTHO05D006000 1.1e-155 553.5 326 82.8
THA.LOC104816783 Tarenaya hassleriana HOM05D000974 ORTHO05D006000 1.4e-155 553.1 324 84.6
BcaC05g24841 Brassica carinata HOM05D000974 ORTHO05D006000 1.8e-155 552.7 328 83.8
Lj5g0022297 Lotus japonicus HOM05D000974 ORTHO05D006000 1.8e-155 552.7 326 83.4
THA.LOC104816816 Tarenaya hassleriana HOM05D000974 ORTHO05D006000 1.8e-155 552.7 324 84.0
C05p07940 Brassica napus HOM05D000974 ORTHO05D006000 3.1e-155 552.0 328 83.8
BolC5t29546H Brassica oleracea HOM05D000974 ORTHO05D006000 3.1e-155 552.0 328 83.8
Medtr5g025310 Medicago truncatula HOM05D000974 ORTHO05D006000 3.1e-155 552.0 330 82.4
Sed0019412 Sechium edule HOM05D000974 ORTHO05D006000 3.1e-155 552.0 327 82.9
AT1G09830 Arabidopsis thaliana HOM05D000974 ORTHO05D006000 4.1e-155 551.6 328 83.8
Ca_12589_v3 Cicer arietinum L. HOM05D000974 ORTHO05D006000 5.4e-155 551.2 329 83.0
Phvul.007G182100 Phaseolus vulgaris HOM05D000974 ORTHO05D006000 5.4e-155 551.2 327 83.2
VMungo0720G1793 Vigna mungo HOM05D000974 ORTHO05D006000 9.1e-155 550.4 327 82.9
CiPaw.06G174600 Carya illinoinensis HOM05D000974 ORTHO05D006000 1.2e-154 550.1 328 83.2
SalBow8G2098 Salvia bowleyana HOM05D000974 ORTHO05D006000 1.2e-154 550.1 324 83.6
Glyma.10G156900 Glycine max HOM05D000974 ORTHO05D006000 1.6e-154 549.7 324 83.3
MBI06_g06706_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D006000 2.0e-154 549.3 328 82.6
TWI15G1214 Tripterygium wilfordii HOM05D000974 ORTHO05D006000 2.0e-154 549.3 323 84.5
MD08G1243400 Malus domestica HOM05D000974 ORTHO05D006000 3.5e-154 548.5 324 83.3
Prupe.1G580800 Prunus persica HOM05D000974 ORTHO05D006000 3.5e-154 548.5 324 83.3
CARHR009850 Cardamine hirsuta HOM05D000974 ORTHO05D006000 4.5e-154 548.1 328 82.9
A06p06550 Brassica napus HOM05D000974 ORTHO05D006000 5.9e-154 547.7 328 82.9
Sp1g08460 Schrenkiella parvula HOM05D000974 ORTHO05D006000 5.9e-154 547.7 328 82.6
TAR381G1040 Trochodendron aralioides HOM05D000974 ORTHO05D006000 5.9e-154 547.7 327 81.7
AUR62020045 Chenopodium quinoa HOM05D000974 ORTHO05D006000 1.0e-153 547.0 324 82.4
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 1.3e-153 546.6 321 84.7
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 1.7e-153 546.2 320 85.6
Gohir.A01G185000 Gossypium hirsutum HOM05D000974 ORTHO05D006000 2.9e-153 545.4 327 82.9
AL1G20430 Arabidopsis lyrata HOM05D000974 ORTHO05D006000 3.8e-153 545.0 328 83.2
Carub.0001s0921 Capsella rubella HOM05D000974 ORTHO05D006000 6.5e-153 544.3 324 83.0
AUR62001730 Chenopodium quinoa HOM05D000974 ORTHO05D006000 6.5e-153 544.3 324 82.1
BraA06t23866Z Brassica rapa HOM05D000974 ORTHO05D006000 8.6e-153 543.9 328 82.3
Hund18885 Selenicereus undatus HOM05D000974 ORTHO05D006000 1.1e-152 543.5 324 82.4
SalBow4G1817 Salvia bowleyana HOM05D000974 ORTHO05D006000 1.5e-152 543.1 324 82.1
arahy.Tifrunner.gnm1.ann1.0Q8MRK Arachis hypogaea HOM05D000974 ORTHO05D006000 2.5e-152 542.3 328 81.7
arahy.Tifrunner.gnm1.ann1.DWF5LU Arachis hypogaea HOM05D000974 ORTHO05D006000 2.5e-152 542.3 328 81.7
Lalb_Chr21g0311651 Lupinus albus HOM05D000974 ORTHO05D006000 3.2e-152 542.0 326 82.2
Thhalv10007333m.g Eutrema salsugineum HOM05D000974 ORTHO05D006000 5.5e-152 541.2 324 81.8
Sabra01G0171200 Salix brachista HOM05D000974 ORTHO05D006000 9.5e-152 540.4 347 78.7
Ah.08g220180 Amaranthus hybridus HOM05D000974 ORTHO05D006000 1.2e-151 540.0 326 81.6
ECA236G4964 Erigeron canadensis HOM05D000974 ORTHO05D006000 1.2e-151 540.0 324 81.8
BcaB03g13541 Brassica carinata HOM05D000974 ORTHO05D006000 2.1e-151 539.3 324 81.8
Sc17g0003920 Simmondsia chinensis HOM05D000974 ORTHO05D006000 3.6e-151 538.5 324 81.2
HPP92_001871 Vanilla planifolia HOM05D000974 ORTHO05D006000 1.0e-150 537.0 322 81.1
BcaC07g38528 Brassica carinata HOM05D000974 ORTHO05D006000 1.8e-150 536.2 324 80.2
A08p34320 Brassica napus HOM05D000974 ORTHO05D006000 1.8e-150 536.2 324 80.6
BraA08t35343Z Brassica rapa HOM05D000974 ORTHO05D006000 1.8e-150 536.2 324 80.6
CDE04G1010 Ceratophyllum demersum HOM05D000974 ORTHO05D006000 2.3e-150 535.8 324 80.6
HanXRQChr11g0329691 Helianthus annuus HOM05D000974 ORTHO05D006000 2.3e-150 535.8 324 81.2
HanXRQChr06g0176431 Helianthus annuus HOM05D000974 ORTHO05D006000 5.2e-150 534.6 326 80.7
Aa31LG1G5090 Aethionema arabicum HOM05D000974 ORTHO05D006000 2.0e-149 532.7 350 76.9
Os08g0191200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D006000 2.8e-148 528.9 324 78.4
Gorai.002G218200 Gossypium raimondii HOM05D000974 ORTHO05D006000 4.9e-148 528.1 327 80.4
Lsat_1_v5_gn_7_76800 Lactuca sativa HOM05D000974 ORTHO05D006000 4.9e-148 528.1 324 80.2
ATR0598G043 Amborella trichopoda HOM05D000974 ORTHO05D006000 6.3e-148 527.7 324 79.3
EL10Ac7g16076 Beta vulgaris HOM05D000974 ORTHO05D006000 1.1e-147 526.9 344 77.0
BolC8t48951H Brassica oleracea HOM05D000974 ORTHO05D006000 1.1e-147 526.9 324 79.6
Aqoxy1G01816 Aquilegia oxysepala HOM05D000974 ORTHO05D006000 3.1e-147 525.4 331 79.5
Zm00001eb294330 Zea mays HOM05D000974 ORTHO05D006000 8.6e-145 517.3 327 77.1
MD15G1437700 Malus domestica HOM05D000974 ORTHO05D006000 1.1e-144 516.9 369 72.4
HPP92_026669 Vanilla planifolia HOM05D000974 ORTHO05D006000 1.5e-144 516.5 321 79.4
Migut.N00845 Erythranthe guttata HOM05D000974 ORTHO05D006000 7.3e-144 514.2 338 78.1
PSO782G2965 Papaver somniferum HOM05D000974 ORTHO05D006000 7.3e-144 514.2 336 75.6
Os12g0197100 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D006000 9.5e-144 513.8 319 78.1
PSO170G5315 Papaver somniferum HOM05D000974 ORTHO05D006000 3.6e-143 511.9 336 75.0
SEGI_14806 Sequoiadendron giganteum HOM05D000974 ORTHO05D006000 1.4e-142 510.0 327 74.3
Eucgr.I02773 Eucalyptus grandis HOM05D000974 ORTHO05D006000 3.7e-140 501.9 327 75.8
FAN10G2816 Fragaria x ananassa HOM05D000974 ORTHO05D006000 9.2e-139 497.3 303 83.2
SGA_v2.0_scaffold42G15899 Striga asiatica HOM05D000974 ORTHO05D006000 1.7e-137 493.0 369 68.6
Pp3c19_9430 Physcomitrium patens HOM05D000974 ORTHO05D006000 3.9e-137 491.9 328 73.5
Pp3c22_7830 Physcomitrium patens HOM05D000974 ORTHO05D006000 2.8e-135 485.7 324 71.9
SMO358G0426 Selaginella moellendorffii HOM05D000974 ORTHO05D006000 3.1e-134 482.3 323 71.8
Mapoly0041s0149 Marchantia polymorpha HOM05D000974 ORTHO05D006000 2.2e-132 476.1 322 71.4
Gohir.D01G176200 Gossypium hirsutum HOM05D000974 ORTHO05D006000 4.9e-132 474.9 327 74.3
CDE02G0137 Ceratophyllum demersum HOM05D000974 ORTHO05D006000 2.4e-131 472.6 282 83.3
AagrBONN_evm.TU.Sc2ySwM_368.1734 Anthoceros agrestis HOM05D000974 ORTHO05D006000 2.8e-127 459.1 322 68.3
CBR_g36226 Chara braunii HOM05D000974 ORTHO05D006000 3.2e-123 445.7 326 66.9
Zm00001eb342350 Zea mays HOM05D000974 ORTHO05D006000 2.5e-120 436.0 273 78.0
Cre18.g749497 Chlamydomonas reinhardtii HOM05D000974 ORTHO05D006000 1.1e-104 384.0 327 59.3
MCO16G439 Micromonas commoda HOM05D000974 ORTHO05D006000 2.4e-102 376.3 324 60.5
arahy.Tifrunner.gnm1.ann1.FF9LB7 Arachis hypogaea HOM05D000974 ORTHO05D006000 1.5e-96 357.1 242 76.4
Nitab4.5_0003281g0060 Nicotiana tabacum HOM05D000974 ORTHO05D006000 3.7e-95 352.4 197 88.3
unitig_8.g3587 Utricularia gibba HOM05D000974 ORTHO05D006000 2.4e-94 349.7 192 89.1
Gohir.A12G043800 Gossypium hirsutum HOM05D000974 ORTHO05D006000 1.3e-92 344.0 191 88.5
PRCOL_00005058 Prasinoderma coloniale HOM05D000974 ORTHO05D006000 1.9e-91 340.1 339 54.6
C08p13210 Brassica napus HOM05D000974 ORTHO05D006000 2.4e-91 339.7 199 83.4
CSS0038090 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D006000 8.4e-84 314.7 191 82.2
Pp3s32_121 Physcomitrium patens HOM05D000974 ORTHO05D006000 3.2e-83 312.8 326 49.7
Nitab4.5_0003893g0060 Nicotiana tabacum HOM05D000974 ORTHO05D006000 3.3e-80 302.8 173 84.4
CSS0048615 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D006000 1.4e-75 287.3 191 76.4
Cfa023437 Carpinus fangiana HOM05D000974 ORTHO05D006000 2.2e-71 273.5 322 45.3
Nitab4.5_0003893g0040 Nicotiana tabacum HOM05D000974 ORTHO05D006000 1.2e-66 257.7 149 85.9
CSS0011192 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D006000 7.0e-54 215.3 131 80.2
Cfa022594 Carpinus fangiana HOM05D000974 ORTHO05D006000 5.5e-51 205.7 246 46.3
Cre18.g749647 Chlamydomonas reinhardtii HOM05D000974 ORTHO05D006000 2.0e-45 187.2 187 50.8
unitig_8.g3588 Utricularia gibba HOM05D000974 ORTHO05D006000 6.5e-44 182.2 120 72.5
CSS0022082 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D006000 4.7e-42 176.0 137 66.4
Actinidia38994 Actinidia chinensis HOM05D000974 ORTHO05D006000 2.0e-37 160.6 90 81.1
Nitab4.5_0001773g0060 Nicotiana tabacum HOM05D000974 ORTHO05D006000 6.8e-33 145.6 97 75.3
arahy.Tifrunner.gnm1.ann1.3IC4JN Arachis hypogaea HOM05D000974 ORTHO05D006000 4.4e-32 142.9 90 77.8
Sabra03G0003100 Salix brachista HOM05D000974 ORTHO05D006000 8.0e-26 122.1 78 75.6
Haze_26160 Corylus avellana HOM05D003155 ORTHO05D004342 4.3e-19 99.8 258 30.6
arahy.Tifrunner.gnm1.ann1.G9FX3A Arachis hypogaea HOM05D000974 ORTHO05D083560 1.5e-16 91.3 53 81.1
Nitab4.5_0000787g0090 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.6e-10 70.1 41 85.4
BcaB03g13286 Brassica carinata HOM05D000974 ORTHO05D091645 5.4e-06 56.2 28 96.4


User provided reference genes

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