Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030810.1 Olea europaea HOM05D005540 ORTHO05D006932 6.7e-93 344.0 169 100.0
vmacro18057 Vaccinium macrocarpon HOM05D005540 ORTHO05D006932 3.9e-69 265.0 157 82.2
ClCG05G010900 Citrullus lanatus HOM05D005540 ORTHO05D006932 1.1e-68 263.5 157 82.2
RcHm_v2.0_Chr2g0122561 Rosa chinensis HOM05D005540 ORTHO05D006932 2.0e-68 262.7 157 82.8
Nitab4.5_0004399g0070 Nicotiana tabacum HOM05D005540 ORTHO05D006932 2.6e-68 262.3 171 76.6
Nitab4.5_0002248g0040 Nicotiana tabacum HOM05D005540 ORTHO05D006932 7.4e-68 260.8 171 76.6
Migut.H00866 Erythranthe guttata HOM05D005540 ORTHO05D006932 1.3e-67 260.0 157 83.4
MSTRG.23613 Avicennia marina HOM05D005540 ORTHO05D006932 1.7e-67 259.6 157 82.8
COL.COLO4_15705 Corchorus olitorius HOM05D005540 ORTHO05D006932 1.1e-66 256.9 157 81.5
Medtr5g079730 Medicago truncatula HOM05D005540 ORTHO05D006932 7.0e-66 254.2 157 82.8
TPR.G3482 Trifolium pratense HOM05D005540 ORTHO05D006932 7.0e-66 254.2 157 82.8
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 7.0e-66 254.2 157 80.9
Eucgr.F02818 Eucalyptus grandis HOM05D005540 ORTHO05D006932 1.5e-65 253.1 156 80.1
Sed0009967 Sechium edule HOM05D005540 ORTHO05D006932 2.0e-65 252.7 157 81.5
Dinv14871 Davidia involucrata HOM05D005540 ORTHO05D006932 4.5e-65 251.5 157 80.9
CSS0010845 Camellia sinensis var. sinensis HOM05D005540 ORTHO05D006932 7.7e-65 250.8 157 80.3
Ca_05867_v3 Cicer arietinum L. HOM05D005540 ORTHO05D006932 1.0e-64 250.4 157 80.3
Sabra17G0107500 Salix brachista HOM05D005540 ORTHO05D006932 1.0e-64 250.4 169 77.5
Actinidia39198 Actinidia chinensis HOM05D005540 ORTHO05D006932 1.3e-64 250.0 155 80.6
Lj4A178T43 Lonicera japonica HOM05D005540 ORTHO05D006932 1.7e-64 249.6 173 76.3
FvH4_1g24900 Fragaria vesca HOM05D005540 ORTHO05D006932 2.2e-64 249.2 157 78.3
Atru.chr4.1672 Acer truncatum HOM05D005540 ORTHO05D006932 2.9e-64 248.8 157 80.3
Lalb_Chr18g0053271 Lupinus albus HOM05D005540 ORTHO05D006932 3.8e-64 248.4 157 79.0
TAR629G0151 Trochodendron aralioides HOM05D005540 ORTHO05D006932 3.8e-64 248.4 157 80.3
Duzib138G0816 Durio zibethinus HOM05D005540 ORTHO05D006932 5.0e-64 248.1 157 78.3
Thhalv10027854m.g Eutrema salsugineum HOM05D005540 ORTHO05D006932 5.0e-64 248.1 157 76.4
Psat2g040920 Pisum sativum HOM05D005540 ORTHO05D006932 5.0e-64 248.1 157 80.3
Rhsim08G0085100 Rhododendron simsii HOM05D005540 ORTHO05D006932 5.0e-64 248.1 195 67.2
THA.LOC104822414 Tarenaya hassleriana HOM05D005540 ORTHO05D006932 5.0e-64 248.1 157 79.0
Atru.BG.179.p Acer truncatum HOM05D005540 ORTHO05D006932 6.5e-64 247.7 154 80.5
BcaC02g09619 Brassica carinata HOM05D005540 ORTHO05D006932 6.5e-64 247.7 157 76.4
A04p11070 Brassica napus HOM05D005540 ORTHO05D006932 6.5e-64 247.7 157 76.4
C04p44790 Brassica napus HOM05D005540 ORTHO05D006932 6.5e-64 247.7 157 76.4
BolC4t26053H Brassica oleracea HOM05D005540 ORTHO05D006932 6.5e-64 247.7 157 76.4
BraA04t16769Z Brassica rapa HOM05D005540 ORTHO05D006932 6.5e-64 247.7 157 76.4
FAN28G0493 Fragaria x ananassa HOM05D005540 ORTHO05D006932 6.5e-64 247.7 157 78.3
Cfa007847 Carpinus fangiana HOM05D005540 ORTHO05D006932 8.5e-64 247.3 157 79.0
Potri.017G129000 Populus trichocarpa HOM05D005540 ORTHO05D006932 8.5e-64 247.3 157 79.6
Solyc02g091340.4 Solanum lycopersicum HOM05D005540 ORTHO05D006932 8.5e-64 247.3 157 78.3
Sopen02g035960 Solanum pennellii HOM05D005540 ORTHO05D006932 8.5e-64 247.3 157 78.3
Glyma.11G218700 Glycine max HOM05D005540 ORTHO05D006932 1.4e-63 246.5 157 80.9
Sp7g04170 Schrenkiella parvula HOM05D005540 ORTHO05D006932 1.4e-63 246.5 157 76.4
CsaV3_3G021680 Cucumis sativus L. HOM05D005540 ORTHO05D006932 1.9e-63 246.1 157 79.0
BcaB06g27151 Brassica carinata HOM05D005540 ORTHO05D006932 2.5e-63 245.7 157 75.8
Carub.0007s3304 Capsella rubella HOM05D005540 ORTHO05D006932 2.5e-63 245.7 157 76.4
PSO017G2970 Papaver somniferum HOM05D005540 ORTHO05D006932 2.5e-63 245.7 157 77.7
Aqoxy3G00138 Aquilegia oxysepala HOM05D005540 ORTHO05D006932 3.2e-63 245.4 157 80.3
CiPaw.03G067900 Carya illinoinensis HOM05D005540 ORTHO05D006932 3.2e-63 245.4 157 80.3
Sc14g0004860 Simmondsia chinensis HOM05D005540 ORTHO05D006932 4.2e-63 245.0 157 79.0
VMungo1383G3344 Vigna mungo HOM05D005540 ORTHO05D006932 4.2e-63 245.0 157 79.6
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea HOM05D005540 ORTHO05D006932 5.5e-63 244.6 174 73.0
Glyma.18G038600 Glycine max HOM05D005540 ORTHO05D006932 5.5e-63 244.6 157 80.3
Prupe.3G158100 Prunus persica HOM05D005540 ORTHO05D006932 5.5e-63 244.6 157 78.3
PGR004G0611 Punica granatum HOM05D005540 ORTHO05D006932 5.5e-63 244.6 157 77.7
CANSAT78G2033 Cannabis sativa HOM05D005540 ORTHO05D006932 7.2e-63 244.2 157 78.3
LjContig00141g0003223 Lotus japonicus HOM05D005540 ORTHO05D006932 9.4e-63 243.8 157 78.3
TWI77G0639 Tripterygium wilfordii HOM05D005540 ORTHO05D006932 9.4e-63 243.8 157 79.0
Aa31LG9G17310 Aethionema arabicum HOM05D005540 ORTHO05D006932 1.2e-62 243.4 157 75.8
Cc07_g08210 Coffea canephora HOM05D005540 ORTHO05D006932 1.2e-62 243.4 158 80.4
Phvul.001G232200 Phaseolus vulgaris HOM05D005540 ORTHO05D006932 2.1e-62 242.7 157 78.3
ECA232G3523 Erigeron canadensis HOM05D005540 ORTHO05D006932 3.6e-62 241.9 157 77.7
Manes.07G054300 Manihot esculenta HOM05D005540 ORTHO05D006932 3.6e-62 241.9 157 77.7
Thecc.04G122100 Theobroma cacao HOM05D005540 ORTHO05D006932 3.6e-62 241.9 157 76.4
Gohir.A11G161800 Gossypium hirsutum HOM05D005540 ORTHO05D006932 6.1e-62 241.1 157 77.7
Lsat_1_v5_gn_0_4201 Lactuca sativa HOM05D005540 ORTHO05D006932 6.1e-62 241.1 154 78.6
Ciclev10012086m.g Citrus clementina HOM05D005540 ORTHO05D006932 8.0e-62 240.7 157 78.3
Gohir.D11G168100 Gossypium hirsutum HOM05D005540 ORTHO05D006932 8.0e-62 240.7 157 77.1
Gorai.007G179400 Gossypium raimondii HOM05D005540 ORTHO05D006932 8.0e-62 240.7 157 77.1
CARHR214890 Cardamine hirsuta HOM05D005540 ORTHO05D006932 1.0e-61 240.4 157 75.8
CDE06G0494 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 1.0e-61 240.4 157 77.1
AT5G37850 Arabidopsis thaliana HOM05D005540 ORTHO05D006932 1.4e-61 240.0 157 75.2
AL7G46750 Arabidopsis lyrata HOM05D005540 ORTHO05D006932 6.7e-61 237.7 157 74.5
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 6.7e-61 237.7 157 75.2
GSVIVG01030869001 Vitis vinifera HOM05D005540 ORTHO05D006932 1.1e-60 236.9 157 75.8
PSO478G5258 Papaver somniferum HOM05D005540 ORTHO05D006932 1.5e-60 236.5 152 77.6
Lsat_1_v5_gn_4_154720 Lactuca sativa HOM05D005540 ORTHO05D006932 2.0e-60 236.1 182 69.2
Os12g0600400 Oryza sativa ssp. japonica HOM05D005540 ORTHO05D006932 2.0e-60 236.1 157 73.9
Zm00001eb135500 Zea mays HOM05D005540 ORTHO05D006932 2.0e-60 236.1 157 74.5
ATR0686G023 Amborella trichopoda HOM05D005540 ORTHO05D006932 3.3e-60 235.3 157 76.4
Sed0014193 Sechium edule HOM05D005540 ORTHO05D006932 4.4e-60 235.0 157 76.4
HPP92_024131 Vanilla planifolia HOM05D005540 ORTHO05D006932 4.8e-59 231.5 157 72.6
Dinv19006 Davidia involucrata HOM05D005540 ORTHO05D006932 6.3e-59 231.1 157 76.4
HPP92_024102 Vanilla planifolia HOM05D005540 ORTHO05D006932 8.2e-59 230.7 157 72.6
SEGI_01535 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 1.6e-57 226.5 151 73.5
Pp3c7_20600 Physcomitrium patens HOM05D005540 ORTHO05D006932 8.5e-56 220.7 157 70.7
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea HOM05D005540 ORTHO05D006932 2.1e-54 216.1 157 71.3
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea HOM05D005540 ORTHO05D006932 2.1e-54 216.1 157 71.3
Sed0021451 Sechium edule HOM05D005540 ORTHO05D006932 1.4e-53 213.4 157 67.5
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis HOM05D005540 ORTHO05D006932 1.8e-53 213.0 157 68.8
Pp3c11_8570 Physcomitrium patens HOM05D005540 ORTHO05D006932 1.2e-52 210.3 157 66.9
Cpa.g.sc116.26 Carica papaya HOM05D005540 ORTHO05D006932 1.5e-52 209.9 130 79.2
Nn4g24119 Nelumbo nucifera HOM05D005540 ORTHO05D006932 2.0e-52 209.5 135 77.8
Sed0017329 Sechium edule HOM05D005540 ORTHO05D006932 2.6e-52 209.1 157 66.9
EL10Ac2g04488 Beta vulgaris HOM05D005540 ORTHO05D006932 7.5e-52 207.6 157 68.8
Mapoly0043s0025 Marchantia polymorpha HOM05D005540 ORTHO05D006932 7.5e-52 207.6 157 66.9
Nn3g18203 Nelumbo nucifera HOM05D005540 ORTHO05D006932 7.5e-52 207.6 131 80.9
CBR_g12736 Chara braunii HOM05D005540 ORTHO05D006932 1.7e-51 206.5 142 71.8
QL11p004195 Quercus lobata HOM05D005540 ORTHO05D006932 6.3e-51 204.5 148 70.9
SMO117G0213 Selaginella moellendorffii HOM05D005540 ORTHO05D006932 8.5e-48 194.1 147 66.0
Duzib133G1255 Durio zibethinus HOM05D005540 ORTHO05D006932 2.5e-47 192.6 157 65.6
CDE04G3097 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 3.6e-46 188.7 157 65.0
Peaxi162Scf00803g00528 Petunia axillaris HOM05D005540 ORTHO05D006932 7.5e-44 181.0 157 61.8
FAN23G2620 Fragaria x ananassa HOM05D005540 ORTHO05D006932 2.8e-43 179.1 161 60.9
Ah.10g037980 Amaranthus hybridus HOM05D005540 ORTHO05D006932 1.8e-42 176.4 157 61.1
Haze_14219 Corylus avellana HOM05D005540 ORTHO05D006932 2.4e-42 176.0 157 62.4
MD12G1075700 Malus domestica HOM05D005540 ORTHO05D006932 2.4e-42 176.0 157 59.9
MCO05G093 Micromonas commoda HOM05D005540 ORTHO05D006932 1.2e-41 173.7 150 59.3
Hma1.2p1_0283F.1_g113550 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 2.7e-41 172.6 157 61.1
Cre03.g173800 Chlamydomonas reinhardtii HOM05D005540 ORTHO05D006932 1.2e-36 157.1 137 58.4
SGA_v2.0_scaffold49G18144 Striga asiatica HOM05D005540 ORTHO05D006932 2.0e-36 156.4 91 80.2
SalBow3G0445 Salvia bowleyana HOM05D005540 ORTHO05D006932 5.7e-36 154.8 88 83.0
AUR62023244 Chenopodium quinoa HOM05D005540 ORTHO05D006932 1.3e-35 153.7 110 67.3
MBI16_g05922_MAGBIO Magnolia biondii HOM05D005540 ORTHO05D006932 1.5e-31 140.2 81 80.2
SHI09520 Sapria himalayana HOM05D005540 ORTHO05D006932 5.4e-26 121.7 71 81.7
MELO3C031731.2 Cucumis melo HOM05D005540 ORTHO05D006932 4.6e-25 118.6 67 80.6
Atru.chr4.2426 Acer truncatum HOM05D005540 ORTHO05D006932 1.7e-24 116.7 76 75.0
SalBow3G4194 Salvia bowleyana HOM05D005540 ORTHO05D006932 2.3e-24 116.3 62 91.9
MELO3C020384.2 Cucumis melo HOM05D005540 ORTHO05D006932 6.6e-24 114.8 67 79.1
FAN26G3341 Fragaria x ananassa HOM05D005540 ORTHO05D006932 1.1e-23 114.0 62 90.3
AUR62023196 Chenopodium quinoa HOM05D005540 ORTHO05D006932 5.6e-23 111.7 62 87.1
FAN26G0473 Fragaria x ananassa HOM05D005540 ORTHO05D006932 6.2e-22 108.2 62 77.4
Hma1.2p1_0179F.1_g079120 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 6.8e-21 104.8 62 85.5
DCAR_025877 Daucus carota HOM05D005540 ORTHO05D006932 6.0e-17 91.7 56 78.6
Haze_26639 Corylus avellana HOM05D005540 ORTHO05D006932 1.0e-16 90.9 116 42.2
SHI09525 Sapria himalayana HOM05D005540 ORTHO05D006932 8.6e-16 87.8 60 76.7
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 3.1e-13 79.3 118 35.6
Hma1.2p1_0179F.1_g079130 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 2.6e-12 76.3 36 94.4
Cfa022314 Carpinus fangiana HOM05D005540 ORTHO05D006932 1.6e-09 67.0 124 33.1
SHI09501 Sapria himalayana HOM05D005540 ORTHO05D006932 5.6e-07 58.5 81 42.0


User provided reference genes

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