Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030714.1 Olea europaea HOM05D003674 ORTHO05D004226 2.8e-58 228.4 116 100.0
CSS0005418 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 2.0e-40 169.1 116 75.0
Eucgr.K01029 Eucalyptus grandis HOM05D003674 ORTHO05D004226 4.5e-40 167.9 115 74.8
SGA_v2.0_scaffold322G48614 Striga asiatica HOM05D003674 ORTHO05D004226 4.5e-40 167.9 115 77.4
Cc05_g07170 Coffea canephora HOM05D003674 ORTHO05D004226 2.2e-39 165.6 114 74.6
CSS0020583 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 2.9e-39 165.2 116 74.1
CSS0035927 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 3.8e-39 164.9 116 74.1
MSTRG.14342 Avicennia marina HOM05D003674 ORTHO05D004226 8.5e-39 163.7 116 75.0
Potri.013G131100 Populus trichocarpa HOM05D003674 ORTHO05D004226 1.9e-38 162.5 114 74.6
Oeu017491.1 Olea europaea HOM05D003674 ORTHO05D004226 4.2e-38 161.4 120 74.2
TWI75G1008 Tripterygium wilfordii HOM05D003674 ORTHO05D004226 4.2e-38 161.4 116 73.3
Ciclev10014388m.g Citrus clementina HOM05D003674 ORTHO05D004226 5.5e-38 161.0 114 75.4
Lalb_Chr22g0356561 Lupinus albus HOM05D003674 ORTHO05D004226 7.2e-38 160.6 115 73.0
TAR624G0345 Trochodendron aralioides HOM05D003674 ORTHO05D004226 7.2e-38 160.6 116 70.7
Actinidia11076 Actinidia chinensis HOM05D003674 ORTHO05D004226 9.4e-38 160.2 120 69.2
Eucgr.K01031 Eucalyptus grandis HOM05D003674 ORTHO05D004226 1.2e-37 159.8 115 71.3
Migut.H01178 Erythranthe guttata HOM05D003674 ORTHO05D004226 1.6e-37 159.5 116 75.9
Prupe.3G138600 Prunus persica HOM05D003674 ORTHO05D004226 2.7e-37 158.7 116 74.1
Duzib132G0159 Durio zibethinus HOM05D003674 ORTHO05D004226 1.0e-36 156.8 114 71.9
Thecc.02G180000 Theobroma cacao HOM05D003674 ORTHO05D004226 1.4e-36 156.4 114 71.9
AL6G49310 Arabidopsis lyrata HOM05D003674 ORTHO05D004226 1.8e-36 156.0 114 71.1
CARHR251990 Cardamine hirsuta HOM05D003674 ORTHO05D004226 1.8e-36 156.0 114 71.1
Manes.13G146400 Manihot esculenta HOM05D003674 ORTHO05D004226 1.8e-36 156.0 107 77.6
CiPaw.04G126200 Carya illinoinensis HOM05D003674 ORTHO05D004226 2.3e-36 155.6 116 71.6
BcaC01g06668 Brassica carinata HOM05D003674 ORTHO05D004226 3.0e-36 155.2 115 68.7
A03p30360 Brassica napus HOM05D003674 ORTHO05D004226 3.0e-36 155.2 115 68.7
C03p36660 Brassica napus HOM05D003674 ORTHO05D004226 3.0e-36 155.2 115 68.7
BolC3t15980H Brassica oleracea HOM05D003674 ORTHO05D004226 3.0e-36 155.2 115 68.7
BraA03t12218Z Brassica rapa HOM05D003674 ORTHO05D004226 3.0e-36 155.2 115 68.7
Carub.0006s3351 Capsella rubella HOM05D003674 ORTHO05D004226 3.0e-36 155.2 114 70.2
CiPaw.03G177300 Carya illinoinensis HOM05D003674 ORTHO05D004226 3.0e-36 155.2 116 69.8
AT4G03560 Arabidopsis thaliana HOM05D003674 ORTHO05D004226 3.9e-36 154.8 114 70.2
Solyc07g053970.3 Solanum lycopersicum HOM05D003674 ORTHO05D004226 3.9e-36 154.8 113 71.7
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 3.9e-36 154.8 113 71.7
BcaB01g01906 Brassica carinata HOM05D003674 ORTHO05D004226 5.1e-36 154.5 114 68.4
BcaC04g23961 Brassica carinata HOM05D003674 ORTHO05D004226 5.1e-36 154.5 114 68.4
A09p02830 Brassica napus HOM05D000230 ORTHO05D000176 5.1e-36 154.5 114 68.4
BolC9t53217H Brassica oleracea HOM05D003674 ORTHO05D004226 5.1e-36 154.5 114 68.4
BraA09t35927Z Brassica rapa HOM05D003674 ORTHO05D004226 5.1e-36 154.5 114 68.4
Thhalv10029480m.g Eutrema salsugineum HOM05D003674 ORTHO05D004226 8.8e-36 153.7 114 69.3
MD17G1240200 Malus domestica HOM05D003674 ORTHO05D004226 1.1e-35 153.3 114 71.1
PGR142G3148 Punica granatum HOM05D003674 ORTHO05D004226 1.1e-35 153.3 120 68.3
SalBow1G3138 Salvia bowleyana HOM05D003674 ORTHO05D004226 1.1e-35 153.3 117 73.5
THA.LOC104801172 Tarenaya hassleriana HOM05D003674 ORTHO05D004226 1.1e-35 153.3 114 67.5
THA.LOC104826033 Tarenaya hassleriana HOM05D003674 ORTHO05D004226 1.1e-35 153.3 114 68.4
QL08p038841 Quercus lobata HOM05D003674 ORTHO05D004226 1.5e-35 152.9 111 74.8
CAN.G248.4 Capsicum annuum HOM05D003674 ORTHO05D004226 2.0e-35 152.5 114 71.9
Cfa014617 Carpinus fangiana HOM05D003674 ORTHO05D004226 2.6e-35 152.1 116 69.8
BcaB01g02542 Brassica carinata HOM05D003674 ORTHO05D004226 4.4e-35 151.4 114 67.5
QL08p038913 Quercus lobata HOM05D003674 ORTHO05D004226 4.4e-35 151.4 111 72.1
Haze_13165 Corylus avellana HOM05D003674 ORTHO05D004226 5.7e-35 151.0 114 69.3
FvH4_6g26210 Fragaria vesca HOM05D003674 ORTHO05D004226 7.4e-35 150.6 115 70.4
Nn1g06549 Nelumbo nucifera HOM05D003674 ORTHO05D004226 9.7e-35 150.2 114 70.2
Aa31LG5G2940 Aethionema arabicum HOM05D003674 ORTHO05D004226 1.3e-34 149.8 114 67.5
arahy.Tifrunner.gnm1.ann1.1DM7TY Arachis hypogaea HOM05D003674 ORTHO05D004226 1.7e-34 149.4 111 67.6
arahy.Tifrunner.gnm1.ann1.1TZ75T Arachis hypogaea HOM05D003674 ORTHO05D004226 1.7e-34 149.4 111 67.6
Gohir.A03G156500 Gossypium hirsutum HOM05D003674 ORTHO05D004226 1.7e-34 149.4 114 70.2
RcHm_v2.0_Chr2g0126531 Rosa chinensis HOM05D003674 ORTHO05D004226 1.7e-34 149.4 114 71.1
SalBow1G0286 Salvia bowleyana HOM05D003674 ORTHO05D004226 1.7e-34 149.4 110 73.6
Actinidia11032 Actinidia chinensis HOM05D003674 ORTHO05D004226 2.2e-34 149.1 120 64.2
QL08p038784 Quercus lobata HOM05D003674 ORTHO05D004226 2.2e-34 149.1 111 73.0
DCAR_019181 Daucus carota HOM05D003674 ORTHO05D004226 2.8e-34 148.7 109 74.3
ECA234G3736 Erigeron canadensis HOM05D003674 ORTHO05D004226 2.8e-34 148.7 116 68.1
FAN02G2237 Fragaria x ananassa HOM05D003674 ORTHO05D004226 2.8e-34 148.7 115 69.6
RcHm_v2.0_Chr2g0126551 Rosa chinensis HOM05D003674 ORTHO05D004226 2.8e-34 148.7 114 69.3
Gohir.D02G179566 Gossypium hirsutum HOM05D003674 ORTHO05D004226 3.7e-34 148.3 114 69.3
Gorai.005G201400 Gossypium raimondii HOM05D003674 ORTHO05D004226 3.7e-34 148.3 114 69.3
Hma1.2p1_2586F.1_g324940 Hydrangea macrophylla HOM05D003674 ORTHO05D004226 4.8e-34 147.9 113 69.9
COL.COLO4_30194 Corchorus olitorius HOM05D003674 ORTHO05D004226 1.4e-33 146.4 117 68.4
MD09G1247300 Malus domestica HOM05D003674 ORTHO05D004226 1.8e-33 146.0 111 65.8
MELO3C018734.2 Cucumis melo HOM05D003674 ORTHO05D004226 9.1e-33 143.7 111 68.5
CDE08G1051 Ceratophyllum demersum HOM05D003674 ORTHO05D004226 1.2e-32 143.3 109 71.6
GSVIVG01020549001 Vitis vinifera HOM05D003674 ORTHO05D004226 1.5e-32 142.9 112 67.9
Eucgr.K01030 Eucalyptus grandis HOM05D003674 ORTHO05D004226 2.0e-32 142.5 115 65.2
vmacro12305 Vaccinium macrocarpon HOM05D003674 ORTHO05D004226 2.0e-32 142.5 120 63.3
Aqoxy4G00814 Aquilegia oxysepala HOM05D003674 ORTHO05D004226 1.0e-31 140.2 116 64.7
MSTRG.14332 Avicennia marina HOM05D003674 ORTHO05D004226 1.3e-31 139.8 110 67.3
HPP92_008135 Vanilla planifolia HOM05D003674 ORTHO05D004226 1.3e-31 139.8 117 65.0
CsaV3_7G004450 Cucumis sativus L. HOM05D003674 ORTHO05D004226 1.7e-31 139.4 107 69.2
Sp6g03570 Schrenkiella parvula HOM05D003674 ORTHO05D004226 1.7e-31 139.4 114 65.8
DCAR_013010 Daucus carota HOM05D003674 ORTHO05D004226 2.2e-31 139.0 132 61.4
Glyma.13G296900 Glycine max HOM05D003674 ORTHO05D004226 2.2e-31 139.0 114 64.0
DCAR_021245 Daucus carota HOM05D003674 ORTHO05D004226 2.9e-31 138.7 107 69.2
Glyma.12G204400 Glycine max HOM05D003674 ORTHO05D004226 3.8e-31 138.3 116 63.8
Sed0011332 Sechium edule HOM05D003674 ORTHO05D004226 3.8e-31 138.3 111 64.9
PSO210G7128 Papaver somniferum HOM05D003674 ORTHO05D004226 1.5e-30 136.3 107 69.2
Sc12g0003090 Simmondsia chinensis HOM05D003674 ORTHO05D004226 1.9e-30 136.0 114 61.4
Phvul.004G108300 Phaseolus vulgaris HOM05D003674 ORTHO05D004226 2.5e-30 135.6 114 63.2
unitig_749.g13960 Utricularia gibba HOM05D003674 ORTHO05D004226 2.5e-30 135.6 110 63.6
HanXRQChr06g0179591 Helianthus annuus HOM05D003674 ORTHO05D004226 5.5e-30 134.4 116 64.7
PSO832G0572 Papaver somniferum HOM05D003674 ORTHO05D004226 9.4e-30 133.7 107 68.2
Lj3g0012901 Lotus japonicus HOM05D003674 ORTHO05D004226 1.2e-29 133.3 114 62.3
TPR.G6424 Trifolium pratense HOM05D003674 ORTHO05D004226 4.7e-29 131.3 117 61.5
Medtr2g090380 Medicago truncatula HOM05D003674 ORTHO05D004226 6.1e-29 131.0 118 62.7
ATR0737G184 Amborella trichopoda HOM05D003674 ORTHO05D004226 1.1e-27 126.7 111 61.3
Dinv23635 Davidia involucrata HOM05D003674 ORTHO05D004226 2.6e-27 125.6 70 85.7
Zm00001eb360320 Zea mays HOM05D003674 ORTHO05D004226 7.4e-27 124.0 114 58.8
VMungo0464G1662 Vigna mungo HOM05D003674 ORTHO05D004226 9.7e-27 123.6 122 56.6
FAN05G0320 Fragaria x ananassa HOM05D000230 ORTHO05D000176 3.7e-26 121.7 99 67.7
Os01g0678500 Oryza sativa ssp. japonica HOM05D003674 ORTHO05D004226 4.8e-26 121.3 108 63.0
Nitab4.5_0000512g0020 Nicotiana tabacum HOM05D003674 ORTHO05D004226 8.2e-26 120.6 87 71.3
Peaxi162Scf00132g00119 Petunia axillaris HOM05D003674 ORTHO05D004226 1.4e-25 119.8 87 70.1
TAR624G0173 Trochodendron aralioides HOM05D003674 ORTHO05D004226 4.1e-25 118.2 93 69.9
MSTRG.14337 Avicennia marina HOM05D003674 ORTHO05D004226 1.2e-24 116.7 84 70.2
EL10Ac9g20767 Beta vulgaris HOM05D003674 ORTHO05D004226 7.7e-24 114.0 111 53.2
DCAR_013011 Daucus carota HOM05D003674 ORTHO05D004226 6.5e-23 110.9 119 54.6
Lsat_1_v5_gn_4_66721 Lactuca sativa HOM05D003674 ORTHO05D004226 3.2e-22 108.6 85 67.1
HanXRQChr10g0297111 Helianthus annuus HOM05D003674 ORTHO05D004226 1.2e-21 106.7 69 76.8
Mapoly0002s0274 Marchantia polymorpha HOM05D003674 ORTHO05D004226 5.2e-20 101.3 120 49.2
Pp3c1_6270 Physcomitrium patens HOM05D003674 ORTHO05D004226 5.2e-20 101.3 115 50.4
Pp3c1_6272 Physcomitrium patens HOM05D003674 ORTHO05D004226 5.2e-20 101.3 115 50.4
PSO675G3793 Papaver somniferum HOM05D003674 ORTHO05D004226 1.5e-19 99.8 111 50.5
Sabra13G0110700 Salix brachista HOM05D003674 ORTHO05D004226 2.0e-19 99.4 95 58.9
CAN.G1472.4 Capsicum annuum HOM05D003674 ORTHO05D004226 7.5e-19 97.4 104 55.8
Psat5g272320 Pisum sativum HOM05D003674 ORTHO05D004226 9.7e-19 97.1 78 61.5
Pp3c15_12230 Physcomitrium patens HOM05D003674 ORTHO05D004226 3.7e-18 95.1 120 45.0
Oeu017490.2 Olea europaea HOM05D003674 ORTHO05D004226 7.0e-17 90.9 48 89.6
AagrBONN_evm.TU.Sc2ySwM_344.5080 Anthoceros agrestis HOM05D003674 ORTHO05D004226 3.5e-16 88.6 107 48.6
Sabra13G0110800 Salix brachista HOM05D003674 ORTHO05D004226 1.5e-14 83.2 98 52.0
Nitab4.5_0004344g0030 Nicotiana tabacum HOM05D003674 ORTHO05D004226 1.6e-13 79.7 55 72.7
AUR62037356 Chenopodium quinoa HOM05D003674 ORTHO05D004226 5.2e-12 74.7 111 41.4
AUR62042592 Chenopodium quinoa HOM05D003674 ORTHO05D004226 5.2e-12 74.7 111 41.4
Ah.01g004260 Amaranthus hybridus HOM05D003674 ORTHO05D004226 1.2e-11 73.6 53 58.5
FAN09G3196 Fragaria x ananassa HOM05D000230 ORTHO05D004226 4.4e-11 71.6 68 60.3
ClCG07G002890 Citrullus lanatus HOM05D003674 ORTHO05D004226 1.7e-10 69.7 65 61.5
Peaxi162Scf00132g00117 Petunia axillaris HOM05D003674 ORTHO05D004226 3.7e-10 68.6 48 70.8
SEGI_38669 Sequoiadendron giganteum HOM05D003674 ORTHO05D004226 5.4e-09 64.7 75 49.3
Ca_01497_v3 Cicer arietinum L. HOM05D003674 ORTHO05D004226 9.1e-09 63.9 76 51.3
Hund01095 Selenicereus undatus HOM05D003674 ORTHO05D004226 2.7e-08 62.4 38 68.4
Pp3c18_10190 Physcomitrium patens HOM05D003674 ORTHO05D004226 5.0e-07 58.2 76 38.2
Mapoly0062s0036 Marchantia polymorpha HOM05D003674 ORTHO05D004226 2.5e-06 55.8 61 41.0
Pp3c21_11410 Physcomitrium patens HOM05D003674 ORTHO05D004226 4.2e-06 55.1 76 36.8


User provided reference genes

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