Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030666.2 Olea europaea HOM05D005415 ORTHO05D006242 0.0e+00 1673.7 904 100.0
MSTRG.22895 Avicennia marina HOM05D005415 ORTHO05D006242 5.6e-154 549.3 876 41.3
Migut.I00557 Erythranthe guttata HOM05D005415 ORTHO05D006242 4.4e-143 513.1 898 39.4
SalBow5G0795 Salvia bowleyana HOM05D005415 ORTHO05D006242 3.8e-134 483.4 894 36.9
SGA_v2.0_scaffold414G51200 Striga asiatica HOM05D005415 ORTHO05D006242 1.9e-133 481.1 895 37.8
Peaxi162Scf00047g00185 Petunia axillaris HOM05D005415 ORTHO05D006242 2.7e-132 477.2 917 38.5
Dinv11193 Davidia involucrata HOM05D005415 ORTHO05D006242 5.6e-130 469.5 908 36.2
Sopen12g001850 Solanum pennellii HOM05D005415 ORTHO05D006242 6.9e-128 462.6 896 37.3
PGSC0003DMG400013896 Solanum tuberosum HOM05D005415 ORTHO05D006242 1.5e-127 461.5 885 38.2
Solyc12g005900.3 Solanum lycopersicum HOM05D005415 ORTHO05D006242 1.7e-126 458.0 896 37.4
Cc10_g14800 Coffea canephora HOM05D005415 ORTHO05D006242 1.9e-125 454.5 905 37.5
Nitab4.5_0001213g0090 Nicotiana tabacum HOM05D005415 ORTHO05D006242 1.9e-122 444.5 838 38.5
GSVIVG01008582001 Vitis vinifera HOM05D005415 ORTHO05D006242 1.6e-121 441.4 909 36.0
Aqoxy3G01618 Aquilegia oxysepala HOM05D005415 ORTHO05D006242 3.1e-120 437.2 861 37.0
Nitab4.5_0003683g0010 Nicotiana tabacum HOM05D005415 ORTHO05D006242 7.6e-119 432.6 856 37.1
Actinidia18334 Actinidia chinensis HOM05D005415 ORTHO05D006242 6.5e-118 429.5 906 35.3
Lj4g0026231 Lotus japonicus HOM05D005415 ORTHO05D006242 2.5e-117 427.6 858 36.1
TAR629G2415 Trochodendron aralioides HOM05D005415 ORTHO05D006242 5.1e-115 419.9 907 34.2
Eucgr.B00088 Eucalyptus grandis HOM05D005415 ORTHO05D006242 6.7e-115 419.5 853 36.9
Atru.chr6.1849 Acer truncatum HOM05D005415 ORTHO05D006242 1.1e-114 418.7 871 34.6
Phvul.002G284900 Phaseolus vulgaris HOM05D005415 ORTHO05D006242 1.9e-114 417.9 893 35.1
Thecc.03G133700 Theobroma cacao HOM05D005415 ORTHO05D006242 4.3e-114 416.8 903 33.6
Potri.015G100200 Populus trichocarpa HOM05D005415 ORTHO05D006242 8.2e-113 412.5 898 35.0
ECA232G0893 Erigeron canadensis HOM05D005415 ORTHO05D006242 2.6e-111 407.5 871 35.7
vmacro19135 Vaccinium macrocarpon HOM05D005415 ORTHO05D006242 2.6e-111 407.5 942 33.7
Duzib068G0666 Durio zibethinus HOM05D005415 ORTHO05D006242 4.5e-111 406.8 855 34.5
VMungo0251G3541 Vigna mungo HOM05D005415 ORTHO05D006242 5.9e-111 406.4 871 35.4
CiPaw.13G052100 Carya illinoinensis HOM05D005415 ORTHO05D006242 3.8e-110 403.7 852 34.9
Gohir.D07G053600 Gossypium hirsutum HOM05D005415 ORTHO05D006242 3.8e-110 403.7 855 35.4
QL10p002178 Quercus lobata HOM05D005415 ORTHO05D006242 6.5e-110 402.9 848 34.9
HanXRQChr09g0273461 Helianthus annuus HOM05D005415 ORTHO05D006242 8.5e-110 402.5 910 34.1
Ciclev10031056m.g Citrus clementina HOM05D005415 ORTHO05D006242 1.1e-109 402.1 836 34.2
Gorai.001G056700 Gossypium raimondii HOM05D005415 ORTHO05D006242 3.2e-109 400.6 910 34.6
Sabra15G0120800 Salix brachista HOM05D005415 ORTHO05D006242 9.3e-109 399.1 902 34.0
unitig_8.g4692 Utricularia gibba HOM05D005415 ORTHO05D006242 9.3e-109 399.1 874 34.7
COL.COLO4_16633 Corchorus olitorius HOM05D005415 ORTHO05D006242 1.2e-108 398.7 837 34.3
Lj9C481T20 Lonicera japonica HOM05D005415 ORTHO05D006242 2.7e-108 397.5 838 33.7
PGR083G0902 Punica granatum HOM05D005415 ORTHO05D006242 3.6e-108 397.1 896 35.0
arahy.Tifrunner.gnm1.ann1.NCF6IW Arachis hypogaea HOM05D005415 ORTHO05D006242 1.0e-107 395.6 907 33.6
Psat7g037120 Pisum sativum HOM05D005415 ORTHO05D006242 1.8e-107 394.8 855 35.7
EL10Ac5g11383 Beta vulgaris HOM05D005415 ORTHO05D006242 3.9e-107 393.7 856 36.1
Sed0003726 Sechium edule HOM05D005415 ORTHO05D006242 7.4e-106 389.4 853 34.5
Sc10g0010570 Simmondsia chinensis HOM05D005415 ORTHO05D006242 6.3e-105 386.3 921 33.9
Cfa018765 Carpinus fangiana HOM05D005415 ORTHO05D006242 1.1e-104 385.6 855 33.7
MD14G1152700 Malus domestica HOM05D005415 ORTHO05D006242 1.4e-104 385.2 843 34.5
CsaV3_1G000400 Cucumis sativus L. HOM05D005415 ORTHO05D006242 4.5e-103 380.2 852 34.0
RcHm_v2.0_Chr7g0189541 Rosa chinensis HOM05D005415 ORTHO05D006242 4.5e-103 380.2 889 34.4
Lsat_1_v5_gn_4_82521 Lactuca sativa HOM05D005415 ORTHO05D006242 5.9e-103 379.8 902 33.6
CANSAT25G2590 Cannabis sativa HOM05D005415 ORTHO05D006242 1.3e-102 378.6 852 34.2
Glyma.08G010700 Glycine max HOM05D005415 ORTHO05D006242 1.3e-102 378.6 921 36.8
MELO3C026191.2 Cucumis melo HOM05D005415 ORTHO05D006242 1.7e-102 378.3 836 34.0
AUR62038846 Chenopodium quinoa HOM05D005415 ORTHO05D006242 3.8e-102 377.1 859 35.3
FAN19G3201 Fragaria x ananassa HOM05D005415 ORTHO05D006242 3.8e-102 377.1 893 33.7
FAN26G2295 Fragaria x ananassa HOM05D005415 ORTHO05D006242 5.0e-102 376.7 892 33.2
Ca_17566_v3 Cicer arietinum L. HOM05D005415 ORTHO05D006242 8.5e-102 375.9 905 33.6
Ca_29727_v3 Cicer arietinum L. HOM05D005415 ORTHO05D006242 8.5e-102 375.9 905 33.6
FvH4_1g26610 Fragaria vesca HOM05D005415 ORTHO05D006242 1.4e-101 375.2 893 33.5
Lalb_Chr13g0297171 Lupinus albus HOM05D005415 ORTHO05D006242 1.4e-101 375.2 907 33.3
Prupe.5G147700 Prunus persica HOM05D005415 ORTHO05D006242 5.5e-101 373.2 843 33.7
Rhsim08G0192500 Rhododendron simsii HOM05D005415 ORTHO05D006242 9.4e-101 372.5 923 32.2
arahy.Tifrunner.gnm1.ann1.MQVT4E Arachis hypogaea HOM05D005415 ORTHO05D006242 1.0e-99 369.0 910 32.9
Sopen05g009520 Solanum pennellii HOM05D005415 ORTHO05D006242 1.5e-98 365.2 881 33.9
AUR62043951 Chenopodium quinoa HOM05D005415 ORTHO05D006242 2.6e-98 364.4 858 33.1
FAN28G1156 Fragaria x ananassa HOM05D005415 ORTHO05D006242 3.7e-97 360.5 887 32.9
MBI07_g01996_MAGBIO Magnolia biondii HOM05D005415 ORTHO05D006242 3.7e-97 360.5 883 32.5
AUR62029576 Chenopodium quinoa HOM05D005415 ORTHO05D006242 1.4e-96 358.6 858 34.4
THA.LOC104798938 Tarenaya hassleriana HOM05D005415 ORTHO05D006242 1.8e-96 358.2 857 32.6
Thhalv10003815m.g Eutrema salsugineum HOM05D005415 ORTHO05D006242 2.5e-93 347.8 856 32.4
DCAR_021639 Daucus carota HOM05D005415 ORTHO05D006242 3.2e-93 347.4 938 35.1
Hund02456 Selenicereus undatus HOM05D005415 ORTHO05D006242 3.2e-93 347.4 861 32.6
Medtr8g096570 Medicago truncatula HOM05D005415 ORTHO05D006242 1.6e-92 345.1 900 32.4
ClCG06G018070 Citrullus lanatus HOM05D005415 ORTHO05D006242 4.7e-92 343.6 914 31.7
AL8G40620 Arabidopsis lyrata HOM05D005415 ORTHO05D006242 7.9e-92 342.8 856 32.9
Aa31LG1G18400 Aethionema arabicum HOM05D005415 ORTHO05D006242 3.0e-91 340.9 892 31.6
CARHR277400 Cardamine hirsuta HOM05D005415 ORTHO05D006242 1.5e-90 338.6 858 31.8
HPP92_021709 Vanilla planifolia HOM05D005415 ORTHO05D006242 2.0e-90 338.2 909 31.1
AT5G63540 Arabidopsis thaliana HOM05D005415 ORTHO05D006242 7.4e-90 336.3 869 32.8
Actinidia25556 Actinidia chinensis HOM05D005415 ORTHO05D006242 1.7e-89 335.1 310 58.7
Haze_07175 Corylus avellana HOM05D005415 ORTHO05D006242 6.3e-89 333.2 484 42.6
FAN23G0140 Fragaria x ananassa HOM05D005415 ORTHO05D006242 1.4e-88 332.0 864 32.6
PSO017G0412 Papaver somniferum HOM05D005415 ORTHO05D006242 1.8e-88 331.6 910 32.2
PSO478G2612 Papaver somniferum HOM05D005415 ORTHO05D006242 1.8e-88 331.6 911 32.5
HPP92_021694 Vanilla planifolia HOM05D005415 ORTHO05D006242 7.7e-87 326.2 893 30.9
ATR0582G259 Amborella trichopoda HOM05D005415 ORTHO05D006242 1.5e-85 322.0 864 30.2
Carub.0008s2427 Capsella rubella HOM05D005415 ORTHO05D006242 3.2e-85 320.9 901 31.2
Sp2g26630 Schrenkiella parvula HOM05D005415 ORTHO05D006242 3.2e-85 320.9 855 31.8
BcaC04g23337 Brassica carinata HOM05D005415 ORTHO05D006242 3.0e-83 314.3 905 30.4
BcaB04g19924 Brassica carinata HOM05D005415 ORTHO05D006242 8.8e-83 312.8 905 30.9
C09p09400 Brassica napus HOM05D005415 ORTHO05D006242 7.5e-82 309.7 906 30.4
BolC9t53852H Brassica oleracea HOM05D005415 ORTHO05D006242 1.1e-80 305.8 919 30.6
Solyc05g014400.4 Solanum lycopersicum HOM05D005415 ORTHO05D006242 4.1e-80 303.9 746 33.4
BraA09t36482Z Brassica rapa HOM05D005415 ORTHO05D006242 5.3e-80 303.5 918 30.4
CAN.G2034.2 Capsicum annuum HOM05D005415 ORTHO05D006242 3.5e-79 300.8 743 33.8
Cpa.g.sc4.162 Carica papaya HOM05D005415 ORTHO05D006242 5.9e-79 300.1 297 54.9
A09p08330 Brassica napus HOM05D005415 ORTHO05D006242 2.9e-78 297.7 916 30.5
CDE05G0217 Ceratophyllum demersum HOM05D005415 ORTHO05D006242 1.6e-76 292.0 863 29.9
Gohir.A07G049320 Gossypium hirsutum HOM05D005415 ORTHO05D006242 2.1e-76 291.6 221 66.5
Manes.06G122000 Manihot esculenta HOM05D005415 ORTHO05D006242 2.1e-76 291.6 743 32.3
CSS0000208 Camellia sinensis var. sinensis HOM05D005415 ORTHO05D006242 6.1e-76 290.0 238 64.7
Zm00001eb085270 Zea mays HOM05D005415 ORTHO05D006242 7.5e-74 283.1 838 30.0
TPR.G12905 Trifolium pratense HOM05D005415 ORTHO05D006242 2.8e-73 281.2 261 57.9
Nn4g22247 Nelumbo nucifera HOM05D005415 ORTHO05D006242 1.2e-71 275.8 763 30.8
Os04g0391000 Oryza sativa ssp. japonica HOM05D005415 ORTHO05D006242 2.7e-63 248.1 232 57.8
Mapoly0147s0014 Marchantia polymorpha HOM05D005415 ORTHO05D006242 9.5e-61 239.6 860 28.5
Ah.11g045540 Amaranthus hybridus HOM05D005415 ORTHO05D006242 5.8e-58 230.3 838 28.2
Gohir.A07G049360 Gossypium hirsutum HOM05D005415 ORTHO05D006242 5.4e-56 223.8 206 57.3
SHI31561 Sapria himalayana HOM05D005415 ORTHO05D006242 6.0e-55 220.3 223 55.6
TPR.G12965 Trifolium pratense HOM05D005415 ORTHO05D006242 7.3e-53 213.4 213 51.6
AagrBONN_evm.TU.Sc2ySwM_117.2504 Anthoceros agrestis HOM05D005415 ORTHO05D006242 9.5e-53 213.0 183 57.9
SMO146G0204 Selaginella moellendorffii HOM05D005415 ORTHO05D006242 4.7e-44 184.1 184 51.6
TAR629G1046 Trochodendron aralioides HOM05D005415 ORTHO05D006242 8.1e-44 183.3 145 62.1
SMO146G0239 Selaginella moellendorffii HOM05D005415 ORTHO05D006242 6.8e-43 180.3 290 40.3
SMO173G0006 Selaginella moellendorffii HOM05D005415 ORTHO05D006242 4.4e-42 177.6 290 40.7
Pp3c4_19920 Physcomitrium patens HOM05D005415 ORTHO05D006242 2.9e-41 174.9 317 37.2
CBR_g45436 Chara braunii HOM05D005415 ORTHO05D006242 1.1e-40 172.9 176 48.9
SMO173G0041 Selaginella moellendorffii HOM05D005415 ORTHO05D006242 3.5e-39 167.9 262 40.5
SHI10695 Sapria himalayana HOM05D005415 ORTHO05D006242 1.0e-38 166.4 187 54.0
SHI10702 Sapria himalayana HOM05D005415 ORTHO05D006242 2.8e-36 158.3 236 41.5
PSO302G0032 Papaver somniferum HOM05D005415 ORTHO05D006242 1.7e-30 139.0 169 49.1
MCO10G310 Micromonas commoda HOM05D005415 ORTHO05D006242 4.3e-29 134.4 203 38.4
Cre17.g712450 Chlamydomonas reinhardtii HOM05D005415 ORTHO05D006242 7.3e-29 133.7 175 41.7
CSS0026788 Camellia sinensis var. sinensis HOM05D005415 ORTHO05D006242 1.4e-27 129.4 100 64.0
SHI31560 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-27 128.3 171 43.9
Medtr1g057810 Medicago truncatula HOM05D000559 ORTHO05D000596 5.2e-27 127.5 195 41.0
Medtr1g105150 Medicago truncatula HOM05D000559 ORTHO05D000596 5.2e-27 127.5 195 41.0
PSO063G6924 Papaver somniferum HOM05D005415 ORTHO05D006242 1.1e-19 103.2 155 39.4
SEGI_11582 Sequoiadendron giganteum HOM05D005415 ORTHO05D006242 5.3e-19 100.9 80 62.5
Lsat_1_v5_gn_8_99581 Lactuca sativa HOM05D005415 ORTHO05D006242 1.2e-18 99.8 133 45.9
PRCOL_00000625 Prasinoderma coloniale HOM05D005415 ORTHO05D006242 1.3e-17 96.3 139 41.0
TAR381G1645 Trochodendron aralioides HOM05D005415 ORTHO05D006242 3.2e-16 91.7 59 72.9
Medtr1g069480 Medicago truncatula HOM05D005415 ORTHO05D006242 3.9e-14 84.7 104 44.2
Lsat_1_v5_gn_4_20540 Lactuca sativa HOM05D005415 ORTHO05D006242 4.3e-13 81.3 64 65.6
PSO478G1426 Papaver somniferum HOM05D005415 ORTHO05D006242 8.1e-12 77.0 230 27.8
SEGI_12458 Sequoiadendron giganteum HOM05D005415 ORTHO05D006242 1.5e-10 72.8 104 32.7
SHI10696 Sapria himalayana HOM05D005415 ORTHO05D006242 2.6e-10 72.0 48 68.8
Cre16.g653000 Chlamydomonas reinhardtii HOM05D006752 ORTHO05D008597 4.5e-10 71.2 124 38.7
PSO063G6394 Papaver somniferum HOM05D005415 ORTHO05D006242 1.3e-09 69.7 56 67.9
Medtr1g071270 Medicago truncatula HOM05D005415 ORTHO05D006242 1.7e-09 69.3 170 32.4
PSO017G3192 Papaver somniferum HOM05D005415 ORTHO05D006242 4.9e-09 67.8 77 46.8
Phvul.009G200000 Phaseolus vulgaris HOM05D006752 ORTHO05D008597 1.9e-08 65.9 167 30.5
Hma1.2p1_0018F.1_g013060 Hydrangea macrophylla HOM05D006752 ORTHO05D008597 7.1e-08 63.9 150 31.3
CARHR192900 Cardamine hirsuta HOM05D006752 ORTHO05D008597 1.6e-07 62.8 133 32.3
Glyma.06G211500 Glycine max HOM05D006752 ORTHO05D008597 1.6e-07 62.8 136 33.1
ATR0815G047 Amborella trichopoda HOM05D006752 ORTHO05D008597 2.1e-07 62.4 158 27.8
Lalb_Chr11g0071961 Lupinus albus HOM05D006752 ORTHO05D008597 2.1e-07 62.4 123 34.1
CBR_g41660 Chara braunii HOM05D001740 ORTHO05D001468 2.7e-07 62.0 117 35.9
Manes.03G066500 Manihot esculenta HOM05D006752 ORTHO05D008597 3.5e-07 61.6 122 34.4
PSO013G0019 Papaver somniferum HOM05D005415 ORTHO05D006242 4.6e-07 61.2 133 33.8
Lj1g0009545 Lotus japonicus HOM05D006752 ORTHO05D008597 6.0e-07 60.8 136 34.6
VMungo1309G1199 Vigna mungo HOM05D006752 ORTHO05D008597 6.0e-07 60.8 138 31.9
FAN26G3101 Fragaria x ananassa HOM05D006752 ORTHO05D008597 7.9e-07 60.5 122 33.6
FAN28G1533 Fragaria x ananassa HOM05D006752 ORTHO05D008597 7.9e-07 60.5 122 32.8
Aqoxy7G01881 Aquilegia oxysepala HOM05D006752 ORTHO05D008597 1.0e-06 60.1 134 32.8
FAN19G2061 Fragaria x ananassa HOM05D006752 ORTHO05D008597 1.0e-06 60.1 122 32.0
PSO782G3782 Papaver somniferum HOM05D006752 ORTHO05D008597 1.0e-06 60.1 123 32.5
FvH4_1g04220 Fragaria vesca HOM05D006752 ORTHO05D008597 1.3e-06 59.7 122 32.0
ECA234G0120 Erigeron canadensis HOM05D006752 ORTHO05D008597 2.3e-06 58.9 117 35.0
Mapoly0040s0028 Marchantia polymorpha HOM05D006752 ORTHO05D008597 3.9e-06 58.2 122 31.1
Actinidia20330 Actinidia chinensis HOM05D006752 ORTHO05D008597 5.1e-06 57.8 97 38.1
Medtr1g069490 Medicago truncatula HOM05D000559 ORTHO05D000596 5.1e-06 57.8 64 46.9
Hund09171 Selenicereus undatus HOM05D006752 ORTHO05D008597 5.1e-06 57.8 146 31.5
TWI34G0637 Tripterygium wilfordii HOM05D006752 ORTHO05D008597 5.1e-06 57.8 173 27.2
Nn8g39294 Nelumbo nucifera HOM05D006752 ORTHO05D008597 6.7e-06 57.4 214 27.6
PGR142G0135 Punica granatum HOM05D006752 ORTHO05D008597 6.7e-06 57.4 123 34.1
GSVIVG01015454001 Vitis vinifera HOM05D006752 ORTHO05D008597 6.7e-06 57.4 134 31.3
Lj7C639G3 Lonicera japonica HOM05D006752 ORTHO05D008597 8.7e-06 57.0 145 29.0


User provided reference genes

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