Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030664.1 Olea europaea HOM05D001065 ORTHO05D003103 3.1e-48 194.9 104 100.0
Oeu061132.1 Olea europaea HOM05D001065 ORTHO05D003103 3.9e-35 151.4 104 80.8
SalBow5G3382 Salvia bowleyana HOM05D001065 ORTHO05D003103 3.8e-22 108.2 102 59.8
GSVIVG01008584001 Vitis vinifera HOM05D001065 ORTHO05D003103 6.5e-22 107.5 104 55.8
CSS0022286 Camellia sinensis var. sinensis HOM05D001065 ORTHO05D003103 1.1e-21 106.7 103 58.3
Rhsim08G0192700 Rhododendron simsii HOM05D001065 ORTHO05D003103 1.4e-21 106.3 98 58.2
Dinv11194 Davidia involucrata HOM05D001065 ORTHO05D003103 7.2e-21 104.0 96 58.3
TAR622G1388 Trochodendron aralioides HOM05D001065 ORTHO05D003103 3.5e-20 101.7 100 55.0
Actinidia18334 Actinidia chinensis HOM05D005415 ORTHO05D006242 4.6e-20 101.3 98 56.1
Peaxi162Scf00516g00329 Petunia axillaris HOM05D001065 ORTHO05D003103 6.1e-20 100.9 102 51.0
Migut.I00558 Erythranthe guttata HOM05D001065 ORTHO05D003103 7.9e-20 100.5 102 56.9
PGSC0003DMG400032483 Solanum tuberosum HOM05D001065 ORTHO05D003103 2.3e-19 99.0 101 49.5
MSTRG.11263 Avicennia marina HOM05D001065 ORTHO05D003103 3.0e-19 98.6 100 55.0
MELO3C026190.2 Cucumis melo HOM05D001065 ORTHO05D003103 3.9e-19 98.2 95 58.9
Sed0024397 Sechium edule HOM05D001065 ORTHO05D003103 5.1e-19 97.8 93 60.2
Nn3g16379 Nelumbo nucifera HOM05D001065 ORTHO05D003103 6.7e-19 97.4 97 53.6
Sc10g0010540 Simmondsia chinensis HOM05D001065 ORTHO05D003103 6.7e-19 97.4 103 51.5
Aqoxy5G03263 Aquilegia oxysepala HOM05D001065 ORTHO05D003103 8.7e-19 97.1 99 51.5
CsaV3_1G000390 Cucumis sativus L. HOM05D001065 ORTHO05D003103 1.1e-18 96.7 95 57.9
ClCG06G018080 Citrullus lanatus HOM05D001065 ORTHO05D003103 4.3e-18 94.7 95 57.9
PGR083G2801 Punica granatum HOM05D001065 ORTHO05D003103 7.4e-18 94.0 96 56.2
Cc07_g20270 Coffea canephora HOM05D001065 ORTHO05D003103 9.7e-18 93.6 102 52.0
Prupe.5G147600 Prunus persica HOM05D001065 ORTHO05D003103 1.3e-17 93.2 95 52.6
QL10p002118 Quercus lobata HOM05D001065 ORTHO05D003103 1.3e-17 93.2 95 53.7
QL10p002155 Quercus lobata HOM05D001065 ORTHO05D003103 1.3e-17 93.2 95 53.7
DCAR_007508 Daucus carota HOM05D001065 ORTHO05D003103 1.6e-17 92.8 102 54.9
Medtr3g099000 Medicago truncatula HOM05D001065 ORTHO05D003103 1.6e-17 92.8 95 51.6
Psat5g052400 Pisum sativum HOM05D001065 ORTHO05D003103 1.6e-17 92.8 95 51.6
CDE06G0841 Ceratophyllum demersum HOM05D001065 ORTHO05D003103 2.2e-17 92.4 99 53.5
Lalb_Chr11g0069411 Lupinus albus HOM05D001065 ORTHO05D003103 2.2e-17 92.4 95 53.7
TPR.G21957 Trifolium pratense HOM05D001065 ORTHO05D003103 2.8e-17 92.0 95 51.6
Sabra15G0121000 Salix brachista HOM05D001065 ORTHO05D003103 3.7e-17 91.7 94 54.3
CANSAT80G1097 Cannabis sativa HOM05D001065 ORTHO05D003103 4.8e-17 91.3 94 54.3
Ca_16061_v3 Cicer arietinum L. HOM05D001065 ORTHO05D003103 4.8e-17 91.3 95 52.6
Potri.015G100400 Populus trichocarpa HOM05D001065 ORTHO05D003103 4.8e-17 91.3 100 51.0
CiPaw.11G004600 Carya illinoinensis HOM05D001065 ORTHO05D003103 6.3e-17 90.9 95 55.8
Lj1g0013977 Lotus japonicus HOM05D001065 ORTHO05D003103 8.2e-17 90.5 95 52.6
MBI07_g40341_MAGBIO Magnolia biondii HOM05D001065 ORTHO05D003103 8.2e-17 90.5 100 50.0
Hund14302 Selenicereus undatus HOM05D001065 ORTHO05D003103 1.1e-16 90.1 96 51.0
MD06G1137800 Malus domestica HOM05D001065 ORTHO05D003103 1.4e-16 89.7 95 50.5
arahy.Tifrunner.gnm1.ann1.N0U0UU Arachis hypogaea HOM05D001065 ORTHO05D003103 2.4e-16 89.0 95 53.7
arahy.Tifrunner.gnm1.ann1.Z6G03S Arachis hypogaea HOM05D001065 ORTHO05D003103 2.4e-16 89.0 95 53.7
Cfa018763 Carpinus fangiana HOM05D001065 ORTHO05D003103 2.4e-16 89.0 95 52.6
Haze_07190 Corylus avellana HOM05D001065 ORTHO05D003103 2.4e-16 89.0 95 52.6
Lj5C93G3 Lonicera japonica HOM05D001065 ORTHO05D003103 5.3e-16 87.8 81 55.6
MD14G1152600 Malus domestica HOM05D001065 ORTHO05D003103 5.3e-16 87.8 95 49.5
Manes.06G122300 Manihot esculenta HOM05D001065 ORTHO05D003103 5.3e-16 87.8 94 52.1
CAN.G732.17 Capsicum annuum HOM05D001065 ORTHO05D003103 1.2e-15 86.7 88 47.7
SGA_v2.0_scaffold188G40322 Striga asiatica HOM05D001065 ORTHO05D003103 1.5e-15 86.3 88 55.7
TWI23G0477 Tripterygium wilfordii HOM05D001065 ORTHO05D003103 2.0e-15 85.9 88 51.1
PSO017G1827 Papaver somniferum HOM05D001065 ORTHO05D003103 2.6e-15 85.5 100 48.0
COL.COLO4_16638 Corchorus olitorius HOM05D001065 ORTHO05D003103 3.4e-15 85.1 99 51.5
TWI14G1104 Tripterygium wilfordii HOM05D001065 ORTHO05D003103 3.4e-15 85.1 88 53.4
Solyc03g097450.4 Solanum lycopersicum HOM05D001065 ORTHO05D003103 4.5e-15 84.7 88 45.5
Eucgr.K03476 Eucalyptus grandis HOM05D001065 ORTHO05D003103 5.9e-15 84.3 99 47.5
unitig_61.g26206 Utricularia gibba HOM05D001065 ORTHO05D003103 7.7e-15 84.0 84 59.5
Dinv23175 Davidia involucrata HOM05D001065 ORTHO05D003103 1.0e-14 83.6 69 59.4
Nitab4.5_0002530g0070 Nicotiana tabacum HOM05D001065 ORTHO05D003103 1.0e-14 83.6 88 44.3
PSO478G1861 Papaver somniferum HOM05D001065 ORTHO05D003103 1.0e-14 83.6 100 47.0
Sopen03g028220 Solanum pennellii HOM05D001065 ORTHO05D003103 1.0e-14 83.6 87 44.8
EL10Ac5g11385 Beta vulgaris HOM05D001065 ORTHO05D003103 3.8e-14 81.6 92 50.0
FAN04G3103 Fragaria x ananassa HOM05D001065 ORTHO05D003103 3.8e-14 81.6 95 50.5
BraA03t11817Z Brassica rapa HOM05D000286 ORTHO05D003103 5.0e-14 81.3 99 46.5
RcHm_v2.0_Chr7g0189531 Rosa chinensis HOM05D001065 ORTHO05D003103 5.0e-14 81.3 95 49.5
BcaC01g05026 Brassica carinata HOM05D000286 ORTHO05D003103 1.1e-13 80.1 99 45.5
Cpa.g.sc4.161 Carica papaya HOM05D001065 ORTHO05D003103 1.4e-13 79.7 88 54.5
ECA232G3427 Erigeron canadensis HOM05D001065 ORTHO05D003103 2.5e-13 79.0 102 43.1
FAN13G0558 Fragaria x ananassa HOM05D001065 ORTHO05D003103 2.5e-13 79.0 95 49.5
Lsat_1_v5_gn_4_82541 Lactuca sativa HOM05D001065 ORTHO05D003103 2.5e-13 79.0 92 46.7
Atru.chr6.1852 Acer truncatum HOM05D001065 ORTHO05D003103 3.2e-13 78.6 94 48.9
FAN08G3680 Fragaria x ananassa HOM05D001065 ORTHO05D003103 3.2e-13 78.6 95 48.4
FAN18G0786 Fragaria x ananassa HOM05D001065 ORTHO05D003103 3.2e-13 78.6 95 48.4
BcaB01g03164 Brassica carinata HOM05D000286 ORTHO05D003103 4.2e-13 78.2 99 45.5
AUR62029578 Chenopodium quinoa HOM05D001065 ORTHO05D003103 5.5e-13 77.8 92 50.0
FvH4_5g08750 Fragaria vesca HOM05D001065 ORTHO05D003103 5.5e-13 77.8 95 47.4
Glyma.04G243100 Glycine max HOM05D001065 ORTHO05D003103 9.4e-13 77.0 95 45.3
Thecc.03G133900 Theobroma cacao HOM05D001065 ORTHO05D003103 2.7e-12 75.5 91 45.1
Phvul.009G132800 Phaseolus vulgaris HOM05D001065 ORTHO05D003103 3.6e-12 75.1 82 48.8
VMungo1309G1952 Vigna mungo HOM05D001065 ORTHO05D003103 4.6e-12 74.7 82 48.8
A05p00310 Brassica napus HOM05D001065 ORTHO05D003103 7.9e-12 73.9 96 43.8
BraA05t19028Z Brassica rapa HOM05D001065 ORTHO05D003103 7.9e-12 73.9 96 43.8
AUR62038849 Chenopodium quinoa HOM05D001065 ORTHO05D003103 7.9e-12 73.9 92 47.8
Duzib205G1530 Durio zibethinus HOM05D001065 ORTHO05D003103 1.0e-11 73.6 89 47.2
Ah.11g045520 Amaranthus hybridus HOM05D002797 ORTHO05D003496 2.3e-11 72.4 92 46.7
Thhalv10001411m.g Eutrema salsugineum HOM05D001065 ORTHO05D003103 5.1e-11 71.2 94 44.7
BcaC02g12553 Brassica carinata HOM05D001065 ORTHO05D003103 6.7e-11 70.9 96 41.7
C04p00220 Brassica napus HOM05D001065 ORTHO05D003103 6.7e-11 70.9 96 41.7
Carub.0004s3035 Capsella rubella HOM05D001065 ORTHO05D003103 8.8e-11 70.5 94 43.6
Os04g0480300 Oryza sativa ssp. japonica HOM05D001065 ORTHO05D003103 8.8e-11 70.5 94 44.7
AL4G47200 Arabidopsis lyrata HOM05D001065 ORTHO05D003103 1.1e-10 70.1 94 43.6
Ciclev10031125m.g Citrus clementina HOM05D001065 ORTHO05D003103 1.1e-10 70.1 77 48.1
HanXRQChr09g0273481 Helianthus annuus HOM05D001065 ORTHO05D003103 2.5e-10 68.9 98 44.9
SEGI_11956 Sequoiadendron giganteum HOM05D001065 ORTHO05D003103 2.5e-10 68.9 88 46.6
Hma1.2p1_0014F.1_g009160 Hydrangea macrophylla HOM05D001065 ORTHO05D003103 3.3e-10 68.6 92 44.6
CARHR143020 Cardamine hirsuta HOM05D001065 ORTHO05D003103 4.3e-10 68.2 94 43.6
Gohir.D12G193000 Gossypium hirsutum HOM05D001065 ORTHO05D003103 4.3e-10 68.2 90 43.3
Gorai.008G207800 Gossypium raimondii HOM05D001065 ORTHO05D003103 5.7e-10 67.8 88 43.2
CBR_g23440 Chara braunii HOM05D001065 ORTHO05D002020 1.7e-09 66.2 75 52.0
vmacro19136 Vaccinium macrocarpon HOM05D001065 ORTHO05D003103 3.7e-09 65.1 99 44.4
A03p26010 Brassica napus HOM05D000286 ORTHO05D000170 4.8e-09 64.7 59 61.0
HPP92_011546 Vanilla planifolia HOM05D001065 ORTHO05D003103 1.1e-08 63.5 88 44.3
Aa31LG1G28960 Aethionema arabicum HOM05D001065 ORTHO05D003103 1.4e-08 63.2 121 36.4
Nitab4.5_0000021g1050 Nicotiana tabacum HOM05D001065 ORTHO05D003103 1.4e-08 63.2 82 43.9
C03p31000 Brassica napus HOM05D000286 ORTHO05D000170 1.8e-08 62.8 59 59.3
Pp3c2_24980 Physcomitrium patens HOM05D001065 ORTHO05D003103 1.8e-08 62.8 70 50.0
Zm00001eb079510 Zea mays HOM05D001065 ORTHO05D003103 1.8e-08 62.8 85 43.5
ATR0582G358 Amborella trichopoda HOM05D001065 ORTHO05D003103 2.4e-08 62.4 81 43.2
AT2G47620 Arabidopsis thaliana HOM05D001065 ORTHO05D003103 3.1e-08 62.0 94 42.6
SMO118G0479 Selaginella moellendorffii HOM05D001065 ORTHO05D002020 4.1e-08 61.6 76 47.4
MBI07_g36514_MAGBIO Magnolia biondii HOM05D001065 ORTHO05D003103 6.9e-08 60.8 71 49.3
SEGI_40040 Sequoiadendron giganteum HOM05D001065 ORTHO05D003103 2.0e-07 59.3 89 38.2
Gohir.A12G190900 Gossypium hirsutum HOM05D001065 ORTHO05D003103 2.6e-07 58.9 90 40.0
SMO144G0098 Selaginella moellendorffii HOM05D001065 ORTHO05D003103 5.9e-07 57.8 78 43.6
MCO05G073 Micromonas commoda HOM05D001065 ORTHO05D002020 3.8e-06 55.1 89 40.4
MCO05G495 Micromonas commoda HOM05D001065 ORTHO05D002020 3.8e-06 55.1 89 40.4
Haze_26487 Corylus avellana HOM05D001065 ORTHO05D002020 6.5e-06 54.3 74 44.6
Mapoly0079s0052 Marchantia polymorpha HOM05D001065 ORTHO05D003103 6.5e-06 54.3 70 45.7
Mapoly0021s0055 Marchantia polymorpha HOM05D001065 ORTHO05D002020 8.5e-06 53.9 76 42.1


User provided reference genes

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