Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029609.1 Olea europaea HOM05D005952 ORTHO05D007262 8.4e-31 136.3 67 100.0
Hma1.2p1_0668F.1_g200040 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 5.1e-20 100.5 59 78.0
CSS0022532 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 6.7e-20 100.1 62 74.2
CSS0029993 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 6.7e-20 100.1 62 74.2
Dinv14825 Davidia involucrata HOM05D005952 ORTHO05D007262 6.7e-20 100.1 62 74.2
Rhsim12G0102200 Rhododendron simsii HOM05D005952 ORTHO05D007262 8.7e-20 99.8 62 74.2
HanXRQChr08g0207671 Helianthus annuus HOM05D005952 ORTHO05D007262 1.5e-19 99.0 62 72.6
Sc04g0004640 Simmondsia chinensis HOM05D005952 ORTHO05D007262 1.5e-19 99.0 62 69.4
Actinidia09658 Actinidia chinensis HOM05D005952 ORTHO05D007262 1.9e-19 98.6 58 79.3
Ca_16474_v3 Cicer arietinum L. HOM05D005952 ORTHO05D007262 2.5e-19 98.2 62 71.0
Actinidia20698 Actinidia chinensis HOM05D005952 ORTHO05D007262 3.3e-19 97.8 59 76.3
Glyma.18G008100 Glycine max HOM05D005952 ORTHO05D007262 3.3e-19 97.8 62 71.0
Lsat_1_v5_gn_8_149221 Lactuca sativa HOM05D005952 ORTHO05D007262 3.3e-19 97.8 62 72.6
Cc00_g13550 Coffea canephora HOM05D005952 ORTHO05D007262 4.3e-19 97.4 62 71.0
DCAR_031192 Daucus carota HOM05D005952 ORTHO05D007262 4.3e-19 97.4 62 71.0
Eucgr.B03481 Eucalyptus grandis HOM05D005952 ORTHO05D007262 4.3e-19 97.4 62 69.4
Lalb_Chr12g0206321 Lupinus albus HOM05D005952 ORTHO05D007262 4.3e-19 97.4 62 71.0
ClCG11G013770 Citrullus lanatus HOM05D005952 ORTHO05D007262 5.6e-19 97.1 62 69.4
Lj1g0012703 Lotus japonicus HOM05D005952 ORTHO05D007262 5.6e-19 97.1 62 69.4
arahy.Tifrunner.gnm1.ann1.19W7I6 Arachis hypogaea HOM05D005952 ORTHO05D007262 7.4e-19 96.7 64 68.8
arahy.Tifrunner.gnm1.ann1.2251QZ Arachis hypogaea HOM05D005952 ORTHO05D007262 7.4e-19 96.7 64 68.8
MELO3C011875.2 Cucumis melo HOM05D005952 ORTHO05D007262 7.4e-19 96.7 62 69.4
Lj3A1066G68 Lonicera japonica HOM05D005952 ORTHO05D007262 7.4e-19 96.7 62 71.0
VMungo1383G3287 Vigna mungo HOM05D005952 ORTHO05D007262 7.4e-19 96.7 62 69.4
Nitab4.5_0000492g0130 Nicotiana tabacum HOM05D005952 ORTHO05D007262 9.6e-19 96.3 62 69.4
SalBow2G2019 Salvia bowleyana HOM05D005952 ORTHO05D007262 9.6e-19 96.3 64 71.9
AUR62024128 Chenopodium quinoa HOM05D005952 ORTHO05D007262 1.3e-18 95.9 62 67.7
Ciclev10031923m.g Citrus clementina HOM05D005952 ORTHO05D007262 1.3e-18 95.9 62 69.4
QL03p053757 Quercus lobata HOM05D005952 ORTHO05D007262 1.3e-18 95.9 62 69.4
ECA233G5976 Erigeron canadensis HOM05D005952 ORTHO05D007262 1.6e-18 95.5 62 69.4
Manes.13G018200 Manihot esculenta HOM05D005952 ORTHO05D007262 1.6e-18 95.5 62 69.4
TWI75G1563 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 1.6e-18 95.5 62 67.7
GSVIVG01010442001 Vitis vinifera HOM05D005952 ORTHO05D007262 1.6e-18 95.5 62 69.4
Cfa009332 Carpinus fangiana HOM05D005952 ORTHO05D007262 2.1e-18 95.1 62 67.7
Haze_12392 Corylus avellana HOM05D005952 ORTHO05D007262 2.1e-18 95.1 62 67.7
CsaV3_5G030360 Cucumis sativus L. HOM05D005952 ORTHO05D007262 2.1e-18 95.1 62 67.7
MBI11_g07451_MAGBIO Magnolia biondii HOM05D005952 ORTHO05D007262 2.1e-18 95.1 62 69.4
Os07g0295400 Oryza sativa ssp. japonica HOM05D005952 ORTHO05D007262 2.1e-18 95.1 62 69.4
Phvul.001G260500 Phaseolus vulgaris HOM05D005952 ORTHO05D007262 2.1e-18 95.1 62 67.7
Sed0028059 Sechium edule HOM05D005952 ORTHO05D007262 2.1e-18 95.1 62 69.4
MSTRG.7992 Avicennia marina HOM05D005952 ORTHO05D007262 2.8e-18 94.7 62 69.4
CARHR026780 Cardamine hirsuta HOM05D005952 ORTHO05D007262 2.8e-18 94.7 62 69.4
AUR62005599 Chenopodium quinoa HOM05D005952 ORTHO05D007262 2.8e-18 94.7 62 66.1
HanXRQChr03g0071651 Helianthus annuus HOM05D005952 ORTHO05D007262 2.8e-18 94.7 63 69.8
Prupe.1G228700 Prunus persica HOM05D005952 ORTHO05D007262 2.8e-18 94.7 62 67.7
AL1G40610 Arabidopsis lyrata HOM05D005952 ORTHO05D007262 3.6e-18 94.4 62 67.7
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 3.6e-18 94.4 62 67.7
AT1G24310 Arabidopsis thaliana HOM05D005952 ORTHO05D007262 3.6e-18 94.4 62 67.7
FAN23G0106 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.6e-18 94.4 62 67.7
Glyma.11G249200 Glycine max HOM05D005952 ORTHO05D007262 3.6e-18 94.4 62 67.7
Gorai.005G168700 Gossypium raimondii HOM05D005952 ORTHO05D007262 3.6e-18 94.4 62 69.4
PGR102G2583 Punica granatum HOM05D005952 ORTHO05D007262 4.8e-18 94.0 62 64.5
Gohir.A03G127000 Gossypium hirsutum HOM05D005952 ORTHO05D007262 6.2e-18 93.6 62 69.4
Gohir.D02G150400 Gossypium hirsutum HOM05D005952 ORTHO05D007262 6.2e-18 93.6 62 69.4
Medtr3g085590 Medicago truncatula HOM05D005952 ORTHO05D007262 6.2e-18 93.6 62 67.7
Psat5g094800 Pisum sativum HOM05D005952 ORTHO05D007262 6.2e-18 93.6 62 67.7
Ah.02g130720 Amaranthus hybridus HOM05D005952 ORTHO05D007262 8.1e-18 93.2 62 66.1
Carub.0001s2576 Capsella rubella HOM05D005952 ORTHO05D007262 8.1e-18 93.2 62 67.7
FAN07G2604 Fragaria x ananassa HOM05D005952 ORTHO05D007262 8.1e-18 93.2 62 66.1
Peaxi162Scf00518g00512 Petunia axillaris HOM05D005952 ORTHO05D007262 8.1e-18 93.2 62 69.4
Sed0012291 Sechium edule HOM05D005952 ORTHO05D007262 8.1e-18 93.2 62 66.1
Solyc12g035650.2 Solanum lycopersicum HOM05D005952 ORTHO05D007262 8.1e-18 93.2 62 67.7
Sopen12g015910 Solanum pennellii HOM05D005952 ORTHO05D007262 8.1e-18 93.2 62 67.7
THA.LOC104825515 Tarenaya hassleriana HOM05D005952 ORTHO05D007262 8.1e-18 93.2 62 67.7
BcaB03g12064 Brassica carinata HOM05D005952 ORTHO05D007262 1.1e-17 92.8 62 67.7
BcaC01g01637 Brassica carinata HOM05D005952 ORTHO05D007262 1.1e-17 92.8 62 67.7
A08p26510 Brassica napus HOM05D005952 ORTHO05D007262 1.1e-17 92.8 62 67.7
C03p73530 Brassica napus HOM05D005952 ORTHO05D007262 1.1e-17 92.8 62 67.7
BolC3t19647H Brassica oleracea HOM05D005952 ORTHO05D007262 1.1e-17 92.8 62 67.7
BraA08t34603Z Brassica rapa HOM05D005952 ORTHO05D007262 1.1e-17 92.8 62 67.7
Cpa.g.sc43.12 Carica papaya HOM05D005952 ORTHO05D007262 1.1e-17 92.8 62 66.1
Sp1g23460 Schrenkiella parvula HOM05D005952 ORTHO05D007262 1.1e-17 92.8 62 67.7
CiPaw.06G101100 Carya illinoinensis HOM05D005952 ORTHO05D007262 1.4e-17 92.4 62 66.1
MD13G1116800 Malus domestica HOM05D005952 ORTHO05D007262 1.4e-17 92.4 62 66.1
Aa31LG7G9800 Aethionema arabicum HOM05D005952 ORTHO05D007262 1.8e-17 92.0 62 64.5
ATR0561G264 Amborella trichopoda HOM05D005952 ORTHO05D007262 1.8e-17 92.0 62 66.1
Duzib251G0036 Durio zibethinus HOM05D005952 ORTHO05D007262 1.8e-17 92.0 62 67.7
CAN.G34.9 Capsicum annuum HOM05D005952 ORTHO05D007262 2.4e-17 91.7 62 67.7
Thhalv10008300m.g Eutrema salsugineum HOM05D005952 ORTHO05D007262 2.4e-17 91.7 62 66.1
Oeu036880.1 Olea europaea HOM05D005952 ORTHO05D007262 2.4e-17 91.7 89 53.9
Hund06080 Selenicereus undatus HOM05D005952 ORTHO05D007262 2.4e-17 91.7 62 66.1
Migut.K00712 Erythranthe guttata HOM05D005952 ORTHO05D007262 3.1e-17 91.3 64 65.6
MD16G1117500 Malus domestica HOM05D005952 ORTHO05D007262 3.1e-17 91.3 62 64.5
Nn3g16502 Nelumbo nucifera HOM05D005952 ORTHO05D007262 3.1e-17 91.3 62 66.1
RcHm_v2.0_Chr4g0430621 Rosa chinensis HOM05D005952 ORTHO05D007262 3.1e-17 91.3 62 64.5
COL.COLO4_20379 Corchorus olitorius HOM05D005952 ORTHO05D007262 4.0e-17 90.9 62 66.1
FvH4_4g23970 Fragaria vesca HOM05D005952 ORTHO05D007262 4.0e-17 90.9 59 67.8
FAN03G3372 Fragaria x ananassa HOM05D005952 ORTHO05D007262 4.0e-17 90.9 59 67.8
FAN04G0683 Fragaria x ananassa HOM05D005952 ORTHO05D007262 4.0e-17 90.9 59 67.8
FAN07G2304 Fragaria x ananassa HOM05D005952 ORTHO05D007262 4.0e-17 90.9 59 67.8
FAN21G1414 Fragaria x ananassa HOM05D005952 ORTHO05D007262 4.0e-17 90.9 59 67.8
FAN24G3446 Fragaria x ananassa HOM05D005952 ORTHO05D007262 4.0e-17 90.9 59 67.8
TWI36G0663 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 4.0e-17 90.9 62 64.5
EL10Ac6g13481 Beta vulgaris HOM05D005952 ORTHO05D007262 5.3e-17 90.5 62 64.5
Zm00001eb305390 Zea mays HOM05D005952 ORTHO05D007262 5.3e-17 90.5 62 66.1
FAN04G2616 Fragaria x ananassa HOM05D005952 ORTHO05D007262 6.9e-17 90.1 58 69.0
Potri.010G059100 Populus trichocarpa HOM05D005952 ORTHO05D007262 6.9e-17 90.1 62 62.9
Atru.chr11.2304 Acer truncatum HOM05D005952 ORTHO05D007262 9.0e-17 89.7 61 65.6
SGA_v2.0_scaffold9G04762 Striga asiatica HOM05D005952 ORTHO05D007262 9.0e-17 89.7 64 65.6
Aqoxy5G03416 Aquilegia oxysepala HOM05D005952 ORTHO05D007262 1.2e-16 89.4 62 62.9
FAN27G1928 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.2e-16 89.4 59 66.1
TAR622G0739 Trochodendron aralioides HOM05D005952 ORTHO05D007262 1.2e-16 89.4 62 64.5
CDE06G2258 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 2.0e-16 88.6 62 64.5
Sabra10G0046500 Salix brachista HOM05D005952 ORTHO05D007262 2.0e-16 88.6 62 62.9
Thecc.02G212400 Theobroma cacao HOM05D005952 ORTHO05D007262 2.6e-16 88.2 62 64.5
CDE02G4251 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 3.4e-16 87.8 62 64.5
CANSAT01G2967 Cannabis sativa HOM05D005952 ORTHO05D007262 5.8e-16 87.0 62 64.5
SHI17953 Sapria himalayana HOM05D005952 ORTHO05D007262 7.6e-16 86.7 62 64.5
Potri.008G176100 Populus trichocarpa HOM05D005952 ORTHO05D007262 9.9e-16 86.3 64 60.9
PSO063G3255 Papaver somniferum HOM05D005952 ORTHO05D007262 1.3e-15 85.9 62 62.9
PSO782G2816 Papaver somniferum HOM05D005952 ORTHO05D007262 1.7e-15 85.5 62 62.9
SEGI_29251 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 1.7e-15 85.5 62 62.9
Mapoly0010s0010 Marchantia polymorpha HOM05D005952 ORTHO05D007262 1.1e-14 82.8 62 58.1
HPP92_023193 Vanilla planifolia HOM05D005952 ORTHO05D007262 1.9e-14 82.0 62 58.1
AagrBONN_evm.TU.Sc2ySwM_362.1552 Anthoceros agrestis HOM05D005952 ORTHO05D007262 4.2e-14 80.9 59 59.3
Nitab4.5_0002026g0100 Nicotiana tabacum HOM05D005952 ORTHO05D007262 1.6e-13 79.0 51 66.7
Pp3c10_15930 Physcomitrium patens HOM05D005952 ORTHO05D007262 2.7e-13 78.2 59 57.6
Pp3c10_15937 Physcomitrium patens HOM05D005952 ORTHO05D007262 2.7e-13 78.2 59 57.6
Pp3c14_14130 Physcomitrium patens HOM05D005952 ORTHO05D007262 3.5e-13 77.8 59 55.9
CBR_g39502 Chara braunii HOM05D005952 ORTHO05D007262 1.8e-12 75.5 59 54.2
SEGI_23869 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 2.3e-12 75.1 62 54.8
CBR_g21943 Chara braunii HOM05D005952 ORTHO05D007262 5.1e-12 73.9 59 52.5


User provided reference genes

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