Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029514.1 Olea europaea HOM05D000014 ORTHO05D000016 1.1e-77 293.1 140 100.0
Oeu010813.1 Olea europaea HOM05D000014 ORTHO05D000016 3.4e-34 148.7 98 71.4
CANSAT54G2497 Cannabis sativa HOM05D000014 ORTHO05D000016 3.8e-33 145.2 141 52.5
CANSAT21G2011 Cannabis sativa HOM05D000014 ORTHO05D000016 6.0e-31 137.9 141 51.1
CANSAT21G0085 Cannabis sativa HOM05D000014 ORTHO05D000016 1.1e-29 133.7 141 50.4
CANSAT80G0973 Cannabis sativa HOM05D000014 ORTHO05D000016 1.1e-29 133.7 141 50.4
CANSAT78G0058 Cannabis sativa HOM05D000014 ORTHO05D000016 3.3e-29 132.1 95 64.2
Nn8g40257 Nelumbo nucifera HOM05D000014 ORTHO05D000016 2.8e-28 129.0 95 63.2
CANSAT01G3096 Cannabis sativa HOM05D000014 ORTHO05D000016 5.3e-27 124.8 120 52.5
RcHm_v2.0_Chr1g0320811 Rosa chinensis HOM05D000014 ORTHO05D000016 3.8e-25 118.6 87 58.6
CANSAT21G1360 Cannabis sativa HOM05D000014 ORTHO05D000016 6.0e-23 111.3 120 48.3
Atru.chr12.2177 Acer truncatum HOM05D000014 ORTHO05D000016 2.1e-20 102.8 87 50.6
CANSAT11G0489 Cannabis sativa HOM05D000014 ORTHO05D000016 1.4e-19 100.1 69 66.7
PSO713G0020 Papaver somniferum HOM05D000014 ORTHO05D000016 6.9e-19 97.8 87 51.7
PSO699G0005 Papaver somniferum HOM05D000014 ORTHO05D000016 1.2e-18 97.1 87 51.7
PSO161G0113 Papaver somniferum HOM05D000014 ORTHO05D000016 2.6e-18 95.9 87 50.6
PSO017G4520 Papaver somniferum HOM05D000014 ORTHO05D000016 3.4e-18 95.5 87 50.6
CANSAT01G2491 Cannabis sativa HOM05D000014 ORTHO05D000016 7.6e-18 94.4 65 66.2
CANSAT21G1378 Cannabis sativa HOM05D000014 ORTHO05D000016 7.6e-18 94.4 65 66.2
CANSAT21G1648 Cannabis sativa HOM05D000014 ORTHO05D000016 6.5e-17 91.3 64 65.6
Hma1.2p1_0109F.1_g052480 Hydrangea macrophylla HOM05D000014 ORTHO05D000016 6.5e-17 91.3 88 52.3
PSO478G4299 Papaver somniferum HOM05D000014 ORTHO05D000016 4.2e-16 88.6 87 46.0
PSO170G5298 Papaver somniferum HOM05D000014 ORTHO05D000016 9.3e-16 87.4 97 41.2
PSO541G1520 Papaver somniferum HOM05D000014 ORTHO05D000016 6.0e-15 84.7 97 40.2
PSO541G3576 Papaver somniferum HOM05D000014 ORTHO05D000016 2.3e-14 82.8 97 41.2
Actinidia20861 Actinidia chinensis HOM05D000014 ORTHO05D000093 3.0e-14 82.4 87 41.4
Actinidia22454 Actinidia chinensis HOM05D000014 ORTHO05D000016 3.0e-14 82.4 87 41.4
CANSAT21G1939 Cannabis sativa HOM05D000014 ORTHO05D000016 3.9e-14 82.0 55 69.1
PSO063G1908 Papaver somniferum HOM05D000014 ORTHO05D000016 3.9e-14 82.0 87 40.2
PSO541G4034 Papaver somniferum HOM05D000014 ORTHO05D000016 3.9e-14 82.0 87 39.1
PSO541G3434 Papaver somniferum HOM05D000014 ORTHO05D000016 1.1e-13 80.5 87 41.4
PSO832G0712 Papaver somniferum HOM05D000014 ORTHO05D000016 1.1e-13 80.5 87 41.4
FvH4_1g28083 Fragaria vesca HOM05D000014 ORTHO05D000016 2.5e-13 79.3 89 42.7
PSO832G2397 Papaver somniferum HOM05D000014 ORTHO05D000016 2.5e-13 79.3 87 39.1
PSO782G1166 Papaver somniferum HOM05D000014 ORTHO05D000016 3.3e-13 79.0 87 40.2
PSO170G3500 Papaver somniferum HOM05D000014 ORTHO05D000016 4.3e-13 78.6 96 38.5
PSO447G0280 Papaver somniferum HOM05D000014 ORTHO05D000016 4.3e-13 78.6 99 39.4
PSO063G2332 Papaver somniferum HOM05D000014 ORTHO05D000016 5.7e-13 78.2 97 39.2
PSO170G3349 Papaver somniferum HOM05D000014 ORTHO05D000016 7.4e-13 77.8 87 41.4
PSO017G4171 Papaver somniferum HOM05D000014 ORTHO05D000016 9.6e-13 77.4 99 39.4
PSO478G3785 Papaver somniferum HOM05D000014 ORTHO05D000016 9.6e-13 77.4 85 37.6
CSS0003442 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000093 2.8e-12 75.9 98 39.8
PSO478G0441 Papaver somniferum HOM05D000014 ORTHO05D000016 2.8e-12 75.9 85 36.5
PSO675G9130 Papaver somniferum HOM05D000014 ORTHO05D000016 2.8e-12 75.9 58 58.6
PSO229G0020 Papaver somniferum HOM05D000014 ORTHO05D000016 3.7e-12 75.5 97 38.1
PSO591G0025 Papaver somniferum HOM05D000014 ORTHO05D000016 3.7e-12 75.5 99 39.4
Gorai.007G204300 Gossypium raimondii HOM05D000014 ORTHO05D000016 6.3e-12 74.7 85 42.4
FvH4_4g02082 Fragaria vesca HOM05D000014 ORTHO05D000016 8.2e-12 74.3 89 41.6
Gohir.D06G120166 Gossypium hirsutum HOM05D000014 ORTHO05D000016 8.2e-12 74.3 84 41.7
PSO541G4525 Papaver somniferum HOM05D000014 ORTHO05D000016 1.1e-11 73.9 60 53.3
PSO063G1156 Papaver somniferum HOM05D000014 ORTHO05D000016 1.4e-11 73.6 105 35.2
PSO210G2460 Papaver somniferum HOM05D000014 ORTHO05D000016 1.4e-11 73.6 99 37.4
PSO478G0157 Papaver somniferum HOM05D000014 ORTHO05D000016 1.4e-11 73.6 83 38.6
PSO832G4262 Papaver somniferum HOM05D000014 ORTHO05D000093 1.4e-11 73.6 99 36.4
QL10p061586 Quercus lobata HOM05D000014 ORTHO05D000016 1.4e-11 73.6 89 39.3
CSS0040149 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000093 4.1e-11 72.0 89 40.4
PSO170G1029 Papaver somniferum HOM05D000014 ORTHO05D000016 6.9e-11 71.2 87 40.2
FvH4_4g14130 Fragaria vesca HOM05D000014 ORTHO05D000093 9.0e-11 70.9 87 34.5
PSO675G3137 Papaver somniferum HOM05D000014 ORTHO05D000016 9.0e-11 70.9 99 36.4
CSS0008445 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000093 1.2e-10 70.5 98 37.8
Oeu014137.1 Olea europaea HOM05D000014 ORTHO05D000016 2.0e-10 69.7 55 54.5
FvH4_6g21790 Fragaria vesca HOM05D000014 ORTHO05D015124 4.5e-10 68.6 91 36.3
PSO063G4050 Papaver somniferum HOM05D000014 ORTHO05D000016 4.5e-10 68.6 87 36.8
TWI81G0756 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 4.5e-10 68.6 87 37.9
PSO063G4451 Papaver somniferum HOM05D000014 ORTHO05D000016 5.9e-10 68.2 84 41.7
QL09p053650 Quercus lobata HOM05D000014 ORTHO05D000093 5.9e-10 68.2 89 38.2
CSS0025281 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000093 1.0e-09 67.4 87 39.1
TWI81G1095 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 1.0e-09 67.4 87 37.9
Atru.chr10.776 Acer truncatum HOM05D000014 ORTHO05D000016 1.7e-09 66.6 86 40.7
Gohir.D11G191632 Gossypium hirsutum HOM05D000014 ORTHO05D000016 1.7e-09 66.6 87 40.2
PSO339G3503 Papaver somniferum HOM05D000014 ORTHO05D000016 1.7e-09 66.6 87 36.8
TWI18G1427 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 1.7e-09 66.6 86 40.7
TWI74G0072 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 1.7e-09 66.6 87 37.9
Manes.02G221020 Manihot esculenta HOM05D000014 ORTHO05D000016 2.2e-09 66.2 86 37.2
PGR031G2305 Punica granatum HOM05D000014 ORTHO05D000093 2.9e-09 65.9 86 37.2
PGR042G0019 Punica granatum HOM05D000014 ORTHO05D000093 2.9e-09 65.9 86 37.2
PGR042G2040 Punica granatum HOM05D000014 ORTHO05D000093 2.9e-09 65.9 86 37.2
PGR119G1452 Punica granatum HOM05D000014 ORTHO05D000093 2.9e-09 65.9 86 37.2
PGR119G1528 Punica granatum HOM05D000014 ORTHO05D000093 2.9e-09 65.9 86 37.2
PGR119G1189 Punica granatum HOM05D000014 ORTHO05D000093 3.8e-09 65.5 86 37.2
TWI39G0697 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 3.8e-09 65.5 87 36.8
Manes.06G029160 Manihot esculenta HOM05D000014 ORTHO05D000016 5.0e-09 65.1 133 30.8
Manes.08G086511 Manihot esculenta HOM05D000014 ORTHO05D000016 6.5e-09 64.7 133 30.8
Manes.07G008991 Manihot esculenta HOM05D000014 ORTHO05D000016 8.5e-09 64.3 86 38.4
Ca_09584_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.4e-08 63.5 86 39.5
Manes.08G076205 Manihot esculenta HOM05D000014 ORTHO05D000016 1.4e-08 63.5 135 31.9
TWI23G1233 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 1.9e-08 63.2 86 38.4
Manes.12G095501 Manihot esculenta HOM05D000014 ORTHO05D000016 2.5e-08 62.8 133 30.1
EL10Ac5g11602 Beta vulgaris HOM05D000014 ORTHO05D000016 3.2e-08 62.4 86 40.7
EL10Ac6g14687 Beta vulgaris HOM05D000014 ORTHO05D000016 3.2e-08 62.4 86 40.7
EL10Ac6g14688 Beta vulgaris HOM05D000014 ORTHO05D000016 4.2e-08 62.0 86 40.7
Manes.02G026950 Manihot esculenta HOM05D000014 ORTHO05D000016 4.2e-08 62.0 86 36.0
Manes.05G137052 Manihot esculenta HOM05D000014 ORTHO05D000016 4.2e-08 62.0 130 29.2
Ca_26650_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 5.5e-08 61.6 86 38.4
Rhsim08G0061100 Rhododendron simsii HOM05D008700 ORTHO05D010645 7.2e-08 61.2 92 33.7
Ca_23138_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 9.3e-08 60.8 70 42.9
SGA_v2.0_scaffold162G37885 Striga asiatica HOM05D000014 ORTHO05D000016 9.3e-08 60.8 81 40.7
FvH4_1g29771 Fragaria vesca HOM05D000014 ORTHO05D000016 1.2e-07 60.5 79 39.2
FvH4_1g29493 Fragaria vesca HOM05D000014 ORTHO05D000016 1.6e-07 60.1 89 37.1
FvH4_4g08973 Fragaria vesca HOM05D000014 ORTHO05D000016 1.6e-07 60.1 74 39.2
PSO782G3418 Papaver somniferum HOM05D000014 ORTHO05D000016 1.6e-07 60.1 97 33.0
PGR102G1458 Punica granatum HOM05D000761 ORTHO05D000016 1.6e-07 60.1 111 34.2
Ca_27944_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.1e-07 59.7 86 37.2
Manes.17G023144 Manihot esculenta HOM05D000014 ORTHO05D000016 2.1e-07 59.7 78 38.5
Ca_06635_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.7e-07 59.3 86 38.4
RcHm_v2.0_Chr2g0133871 Rosa chinensis HOM05D015768 ORTHO05D015124 2.7e-07 59.3 106 34.0
CANSAT80G1312 Cannabis sativa HOM05D000014 ORTHO05D000016 3.6e-07 58.9 91 38.5
Manes.04G064966 Manihot esculenta HOM05D000014 ORTHO05D000016 3.6e-07 58.9 130 27.7
FvH4_3g19212 Fragaria vesca HOM05D000014 ORTHO05D000016 4.6e-07 58.5 89 36.0
FvH4_4g05352 Fragaria vesca HOM05D000014 ORTHO05D000016 4.6e-07 58.5 77 35.1
Ca_19963_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 6.1e-07 58.2 86 36.0
TWI09G0144 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 6.1e-07 58.2 127 30.7
Atru.chr13.2173 Acer truncatum HOM05D000014 ORTHO05D000016 7.9e-07 57.8 100 32.0
Ca_03809_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 7.9e-07 57.8 86 36.0
HanXRQChr05g0135921 Helianthus annuus HOM05D000014 ORTHO05D000016 7.9e-07 57.8 86 36.0
Oeu046423.1 Olea europaea HOM05D000014 ORTHO05D000016 7.9e-07 57.8 88 37.5
Rhsim01G0103800 Rhododendron simsii HOM05D017964 ORTHO05D000016 7.9e-07 57.8 66 43.9
TWI63G1826 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 7.9e-07 57.8 127 30.7
CANSAT80G0554 Cannabis sativa HOM05D000014 ORTHO05D000016 1.0e-06 57.4 91 37.4
CANSAT56G0185 Cannabis sativa HOM05D000014 ORTHO05D000016 1.3e-06 57.0 103 36.9
FvH4_4g14403 Fragaria vesca HOM05D000014 ORTHO05D000016 1.3e-06 57.0 86 32.6
Manes.04G051445 Manihot esculenta HOM05D000014 ORTHO05D000016 1.3e-06 57.0 135 29.6
PSO478G1653 Papaver somniferum HOM05D000014 ORTHO05D000093 1.3e-06 57.0 52 40.4
CANSAT01G0424 Cannabis sativa HOM05D000014 ORTHO05D000016 1.8e-06 56.6 91 37.4
AUR62033010 Chenopodium quinoa HOM05D000014 ORTHO05D000016 1.8e-06 56.6 84 36.9
FvH4_6g22851 Fragaria vesca HOM05D000014 ORTHO05D000016 1.8e-06 56.6 86 32.6
EL10Ac3g05785 Beta vulgaris HOM05D011980 ORTHO05D013507 3.0e-06 55.8 92 35.9
CANSAT01G0105 Cannabis sativa HOM05D000014 ORTHO05D000016 3.0e-06 55.8 103 35.0
Ca_03019_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 3.0e-06 55.8 86 36.0
Ca_03067_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 3.0e-06 55.8 86 34.9
MBI07_g40372_MAGBIO Magnolia biondii HOM05D038278 ORTHO05D036562 3.0e-06 55.8 59 39.0
TWI36G0746 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 3.0e-06 55.8 127 29.9
TWI77G0341 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 3.0e-06 55.8 80 36.2
CANSAT25G3548 Cannabis sativa HOM05D000014 ORTHO05D000016 3.9e-06 55.5 103 35.9
CANSAT78G2394 Cannabis sativa HOM05D000014 ORTHO05D000016 3.9e-06 55.5 91 37.4
Ca_23063_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 3.9e-06 55.5 86 34.9
TWI81G0798 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 3.9e-06 55.5 87 34.5
FvH4_6g18062 Fragaria vesca HOM05D000014 ORTHO05D000093 5.1e-06 55.1 86 31.4
Gorai.010G138200 Gossypium raimondii HOM05D000014 ORTHO05D000016 5.1e-06 55.1 75 37.3
TPR.G29200 Trifolium pratense HOM05D000014 ORTHO05D000016 5.1e-06 55.1 87 37.9
AUR62028459 Chenopodium quinoa HOM05D050513 ORTHO05D000016 6.7e-06 54.7 85 36.5
Ca_19712_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 6.7e-06 54.7 86 36.0
Oeu019854.1 Olea europaea HOM05D000014 ORTHO05D000016 6.7e-06 54.7 87 37.9
Oeu031842.1 Olea europaea HOM05D000014 ORTHO05D000016 6.7e-06 54.7 87 33.3
ClCG04G002730 Citrullus lanatus HOM05D000014 ORTHO05D000016 8.7e-06 54.3 89 33.7
PSO541G3485 Papaver somniferum HOM05D000014 ORTHO05D000016 8.7e-06 54.3 81 34.6
TWI56G0355 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 8.7e-06 54.3 87 34.5


User provided reference genes

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