Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029455.1 Olea europaea HOM05D003169 ORTHO05D003700 1.3e-232 809.3 406 100.0
MSTRG.7098 Avicennia marina HOM05D003169 ORTHO05D003700 1.6e-188 662.9 392 82.4
Cc00_g09100 Coffea canephora HOM05D003169 ORTHO05D003700 1.1e-186 656.8 392 82.9
Migut.M01496 Erythranthe guttata HOM05D003169 ORTHO05D003700 1.0e-184 650.2 392 81.9
CSS0011288 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 2.3e-184 649.0 392 80.4
CAN.G492.81 Capsicum annuum HOM05D003169 ORTHO05D003700 2.3e-184 649.0 392 81.6
Sopen10g001470 Solanum pennellii HOM05D003169 ORTHO05D003700 2.3e-184 649.0 392 81.4
Actinidia26204 Actinidia chinensis HOM05D003169 ORTHO05D003700 8.9e-184 647.1 392 79.8
Oeu025995.1 Olea europaea HOM05D003169 ORTHO05D003700 8.9e-184 647.1 392 81.1
GSVIVG01036703001 Vitis vinifera HOM05D003169 ORTHO05D003700 1.2e-183 646.7 392 80.1
Nitab4.5_0003291g0060 Nicotiana tabacum HOM05D003169 ORTHO05D003700 2.0e-183 646.0 425 76.5
CiPaw.15G111900 Carya illinoinensis HOM05D003169 ORTHO05D003700 4.4e-183 644.8 392 80.6
Thecc.07G189500 Theobroma cacao HOM05D003169 ORTHO05D003700 7.5e-183 644.0 392 80.1
Potri.010G174900 Populus trichocarpa HOM05D003169 ORTHO05D003700 1.3e-182 643.3 392 79.8
Dinv42454 Davidia involucrata HOM05D003169 ORTHO05D003700 2.8e-182 642.1 392 79.8
SGA_v2.0_scaffold186G40168 Striga asiatica HOM05D003169 ORTHO05D003700 6.3e-182 641.0 392 80.9
Gohir.A13G126700 Gossypium hirsutum HOM05D003169 ORTHO05D003700 2.4e-181 639.0 392 79.6
Gohir.D13G130400 Gossypium hirsutum HOM05D003169 ORTHO05D003700 2.4e-181 639.0 392 79.3
Gorai.013G146500 Gossypium raimondii HOM05D003169 ORTHO05D003700 2.4e-181 639.0 392 79.3
Hma1.2p1_0754F.1_g213010 Hydrangea macrophylla HOM05D003169 ORTHO05D003700 3.1e-181 638.6 392 78.8
Nitab4.5_0007774g0020 Nicotiana tabacum HOM05D003169 ORTHO05D003700 9.2e-181 637.1 380 82.6
ECA240G3251 Erigeron canadensis HOM05D003169 ORTHO05D003700 1.2e-180 636.7 392 78.8
Nn7g38410 Nelumbo nucifera HOM05D003169 ORTHO05D003700 1.6e-180 636.3 392 78.8
TAR627G0022 Trochodendron aralioides HOM05D003169 ORTHO05D003700 2.7e-180 635.6 392 79.8
Potri.008G081200 Populus trichocarpa HOM05D003169 ORTHO05D003700 5.9e-180 634.4 392 78.8
Sabra10G0134700 Salix brachista HOM05D003169 ORTHO05D003700 5.9e-180 634.4 392 78.3
Manes.16G048930 Manihot esculenta HOM05D003169 ORTHO05D003700 1.0e-179 633.6 392 79.1
Atru.chr1.22 Acer truncatum HOM05D003169 ORTHO05D003700 1.3e-179 633.3 393 78.4
HanXRQChr03g0077801 Helianthus annuus HOM05D003169 ORTHO05D003700 2.3e-179 632.5 392 78.6
QL04p010784 Quercus lobata HOM05D003169 ORTHO05D003700 2.9e-179 632.1 392 78.6
QL04p095761 Quercus lobata HOM05D003169 ORTHO05D003700 2.9e-179 632.1 392 78.6
VMungo1127G0192 Vigna mungo HOM05D003169 ORTHO05D003700 3.8e-179 631.7 392 78.3
Duzib213G0284 Durio zibethinus HOM05D003169 ORTHO05D003700 1.5e-178 629.8 392 78.6
Lalb_Chr19g0133151 Lupinus albus HOM05D003169 ORTHO05D003700 4.3e-178 628.2 392 77.6
PGR031G0700 Punica granatum HOM05D003169 ORTHO05D003700 2.8e-177 625.5 392 77.6
Medtr8g447090 Medicago truncatula HOM05D003169 ORTHO05D003700 4.7e-177 624.8 392 77.0
Psat4g185200 Pisum sativum HOM05D003169 ORTHO05D003700 4.7e-177 624.8 392 77.0
Phvul.011G180100 Phaseolus vulgaris HOM05D003169 ORTHO05D003700 6.8e-176 620.9 392 76.8
TPR.G30141 Trifolium pratense HOM05D003169 ORTHO05D003700 1.5e-175 619.8 393 77.1
Sed0006985 Sechium edule HOM05D003169 ORTHO05D003700 2.6e-175 619.0 392 76.8
MELO3C019615.2 Cucumis melo HOM05D003169 ORTHO05D003700 5.8e-175 617.8 392 78.1
Peaxi162Scf00670g00216 Petunia axillaris HOM05D003169 ORTHO05D003700 1.3e-174 616.7 371 82.2
Rhsim06G0244800 Rhododendron simsii HOM05D003169 ORTHO05D003700 1.7e-174 616.3 424 73.1
Lj3g0024633 Lotus japonicus HOM05D003169 ORTHO05D003700 6.4e-174 614.4 393 76.1
TWI38G0104 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 6.4e-174 614.4 392 76.5
TWI38G0597 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 6.4e-174 614.4 392 76.5
CsaV3_6G013370 Cucumis sativus L. HOM05D003169 ORTHO05D003700 8.3e-174 614.0 392 77.6
Glyma.08G233702 Glycine max HOM05D003169 ORTHO05D003700 1.1e-173 613.6 392 77.3
Lj2A8G61 Lonicera japonica HOM05D003169 ORTHO05D003700 1.4e-173 613.2 466 68.0
Prupe.4G126100 Prunus persica HOM05D003169 ORTHO05D003700 1.4e-173 613.2 392 77.0
Sc06g0001640 Simmondsia chinensis HOM05D003169 ORTHO05D003700 2.4e-173 612.5 392 76.5
Glyma.15G219200 Glycine max HOM05D003169 ORTHO05D003700 7.0e-173 610.9 392 77.0
MD05G1239900 Malus domestica HOM05D003169 ORTHO05D003700 2.0e-172 609.4 392 76.3
Haze_18485 Corylus avellana HOM05D003169 ORTHO05D003700 3.5e-172 608.6 401 75.6
Aqoxy1G01380 Aquilegia oxysepala HOM05D003169 ORTHO05D003700 7.8e-172 607.4 392 76.0
Eucgr.F04478 Eucalyptus grandis HOM05D003169 ORTHO05D003700 2.3e-171 605.9 389 75.3
TAR629G1197 Trochodendron aralioides HOM05D003169 ORTHO05D003700 6.6e-171 604.4 383 77.0
FvH4_3g13920 Fragaria vesca HOM05D003169 ORTHO05D003700 1.5e-170 603.2 392 75.8
THA.LOC104812392 Tarenaya hassleriana HOM05D003169 ORTHO05D003700 1.5e-170 603.2 392 74.0
arahy.Tifrunner.gnm1.ann1.0T77JN Arachis hypogaea HOM05D003169 ORTHO05D003700 4.3e-170 601.7 392 75.0
CSS0003080 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 7.3e-170 600.9 392 75.3
FAN21G1262 Fragaria x ananassa HOM05D003169 ORTHO05D003700 1.2e-169 600.1 399 74.7
EL10Ac2g03244 Beta vulgaris HOM05D003169 ORTHO05D003700 3.6e-169 598.6 392 75.3
RcHm_v2.0_Chr5g0023151 Rosa chinensis HOM05D003169 ORTHO05D003700 8.0e-169 597.4 392 74.7
AUR62043014 Chenopodium quinoa HOM05D003169 ORTHO05D003700 1.4e-168 596.7 378 78.3
Thhalv10018021m.g Eutrema salsugineum HOM05D003169 ORTHO05D003700 2.3e-168 595.9 395 73.2
FAN25G3213 Fragaria x ananassa HOM05D003169 ORTHO05D003700 5.2e-168 594.7 399 74.4
AT1G79350 Arabidopsis thaliana HOM05D003169 ORTHO05D003700 8.9e-168 594.0 395 72.4
MD10G1218000 Malus domestica HOM05D003169 ORTHO05D003700 8.9e-168 594.0 392 75.0
PSO675G7315 Papaver somniferum HOM05D003169 ORTHO05D003700 1.5e-167 593.2 392 75.3
Sp5g34410 Schrenkiella parvula HOM05D003169 ORTHO05D003700 5.8e-167 591.3 409 70.9
PSO541G6458 Papaver somniferum HOM05D003169 ORTHO05D003700 7.5e-167 590.9 392 75.3
BcaC08g47495 Brassica carinata HOM05D003169 ORTHO05D003700 9.8e-167 590.5 400 71.5
arahy.Tifrunner.gnm1.ann1.4D9FZH Arachis hypogaea HOM05D003169 ORTHO05D003700 2.2e-166 589.3 393 74.0
BolC6t40342H Brassica oleracea HOM05D003169 ORTHO05D003700 3.7e-166 588.6 405 70.6
Os04g0609700 Oryza sativa ssp. japonica HOM05D003169 ORTHO05D003700 3.7e-166 588.6 392 72.7
CANSAT56G1976 Cannabis sativa HOM05D003169 ORTHO05D003700 8.3e-166 587.4 392 75.5
Aa31LG4G1680 Aethionema arabicum HOM05D003169 ORTHO05D003700 1.9e-165 586.3 406 70.7
HPP92_005947 Vanilla planifolia HOM05D003169 ORTHO05D003700 1.2e-164 583.6 383 74.7
vmacro22494 Vaccinium macrocarpon HOM05D003169 ORTHO05D003700 1.6e-164 583.2 461 65.5
BcaB02g08679 Brassica carinata HOM05D003169 ORTHO05D003700 7.8e-164 580.9 430 66.7
Carub.0002s2621 Capsella rubella HOM05D003169 ORTHO05D003700 8.6e-163 577.4 432 66.0
BraA07t31952Z Brassica rapa HOM05D003169 ORTHO05D003700 1.1e-162 577.0 429 66.9
FAN16G1231 Fragaria x ananassa HOM05D003169 ORTHO05D003700 1.1e-162 577.0 440 67.3
Lsat_1_v5_gn_7_69060 Lactuca sativa HOM05D003169 ORTHO05D003700 5.6e-162 574.7 419 69.7
A07p44430 Brassica napus HOM05D003169 ORTHO05D003700 1.6e-161 573.2 398 70.4
Zm00001eb413950 Zea mays HOM05D003169 ORTHO05D003700 3.6e-161 572.0 392 70.9
C06p53240 Brassica napus HOM05D003169 ORTHO05D003700 6.2e-161 571.2 398 70.1
Zm00001eb430630 Zea mays HOM05D003169 ORTHO05D003700 3.4e-159 565.5 388 71.6
Hund20128 Selenicereus undatus HOM05D003169 ORTHO05D003700 2.9e-158 562.4 392 71.9
ATR0794G028 Amborella trichopoda HOM05D003169 ORTHO05D003700 8.3e-158 560.8 396 69.9
Lj3g0007581 Lotus japonicus HOM05D003169 ORTHO05D003700 2.4e-157 559.3 392 68.4
HanXRQChr13g0408911 Helianthus annuus HOM05D003169 ORTHO05D003700 3.2e-157 558.9 386 70.7
HanXRQChr13g0408941 Helianthus annuus HOM05D003169 ORTHO05D003700 3.2e-157 558.9 386 70.7
Peaxi162Scf00420g00518 Petunia axillaris HOM05D003169 ORTHO05D003700 1.2e-156 557.0 390 72.3
Lalb_Chr20g0108381 Lupinus albus HOM05D003169 ORTHO05D003700 2.1e-156 556.2 385 71.7
Rhsim02G0183500 Rhododendron simsii HOM05D003169 ORTHO05D003700 3.6e-153 545.4 417 66.9
arahy.Tifrunner.gnm1.ann1.THX68V Arachis hypogaea HOM05D003169 ORTHO05D003700 2.9e-150 535.8 388 68.3
Ca_03194_v3 Cicer arietinum L. HOM05D003845 ORTHO05D003700 3.9e-147 525.4 378 67.2
Psat0s11g0040 Pisum sativum HOM05D003169 ORTHO05D003700 8.7e-147 524.2 390 66.7
arahy.Tifrunner.gnm1.ann1.JSN7JY Arachis hypogaea HOM05D003169 ORTHO05D003700 1.2e-143 513.8 412 63.3
Medtr2g063620 Medicago truncatula HOM05D003169 ORTHO05D003700 1.2e-143 513.8 391 65.7
DCAR_016853 Daucus carota HOM05D003169 ORTHO05D003700 3.5e-140 502.3 409 63.1
Ah.16g106160 Amaranthus hybridus HOM05D003169 ORTHO05D003700 5.3e-136 488.4 392 66.1
Medtr6g091960 Medicago truncatula HOM05D003169 ORTHO05D003700 5.3e-136 488.4 401 62.1
FAN11G1789 Fragaria x ananassa HOM05D003169 ORTHO05D003700 2.0e-135 486.5 363 69.1
TPR.G3619 Trifolium pratense HOM05D003169 ORTHO05D003700 3.8e-134 482.3 431 57.3
Peaxi162Scf00166g00077 Petunia axillaris HOM05D003169 ORTHO05D003700 8.4e-134 481.1 330 72.4
Cpa.g.sc32.147 Carica papaya HOM05D003169 ORTHO05D003700 5.1e-131 471.9 304 75.7
Cfa017765 Carpinus fangiana HOM05D003169 ORTHO05D003700 3.3e-130 469.2 308 75.3
Pp3c3_5410 Physcomitrium patens HOM05D003169 ORTHO05D003700 4.8e-129 465.3 396 60.4
TPR.G3624 Trifolium pratense HOM05D003169 ORTHO05D003700 1.7e-126 456.8 394 61.7
AUR62041054 Chenopodium quinoa HOM05D003169 ORTHO05D003700 2.9e-126 456.1 315 72.4
Mapoly0153s0011 Marchantia polymorpha HOM05D003169 ORTHO05D003700 6.0e-124 448.4 393 60.3
ClCG02G018810 Citrullus lanatus HOM05D003169 ORTHO05D003700 7.4e-122 441.4 416 58.9
Medtr2g063813 Medicago truncatula HOM05D003169 ORTHO05D003700 6.9e-120 434.9 392 58.7
AagrBONN_evm.TU.Sc2ySwM_228.2486 Anthoceros agrestis HOM05D003169 ORTHO05D003700 3.4e-119 432.6 392 56.9
DCAR_013705 Daucus carota HOM05D003169 ORTHO05D003700 3.8e-118 429.1 391 57.3
COL.COLO4_25001 Corchorus olitorius HOM05D003169 ORTHO05D003700 1.9e-109 400.2 396 57.1
Nitab4.5_0003291g0040 Nicotiana tabacum HOM05D003169 ORTHO05D003700 3.9e-107 392.5 293 69.3
Os08g0223833 Oryza sativa ssp. japonica HOM05D003169 ORTHO05D003700 4.3e-106 389.0 392 53.8
unitig_32.g11074 Utricularia gibba HOM05D003169 ORTHO05D003700 2.2e-105 386.7 390 55.1
DCAR_013706 Daucus carota HOM05D003169 ORTHO05D003700 2.8e-105 386.3 401 53.6
Rhsim06G0106300 Rhododendron simsii HOM05D003169 ORTHO05D003700 6.3e-105 385.2 262 74.0
Ca_22977_v3 Cicer arietinum L. HOM05D003169 ORTHO05D003700 5.2e-91 339.0 250 66.4
HanXRQChr16g0505691 Helianthus annuus HOM05D003169 ORTHO05D003700 6.1e-84 315.5 212 73.1
MBI18_g37376_MAGBIO Magnolia biondii HOM05D003169 ORTHO05D003700 1.4e-83 314.3 201 74.1
SMO358G0497 Selaginella moellendorffii HOM05D003169 ORTHO05D003700 1.1e-80 304.7 250 60.8
Ciclev10006112m.g Citrus clementina HOM05D003169 ORTHO05D003700 6.6e-62 242.3 149 77.2
CBR_g11926 Chara braunii HOM05D003169 ORTHO05D000002 3.4e-58 229.9 204 52.5
VMungo1127G0538 Vigna mungo HOM05D003169 ORTHO05D003700 4.4e-58 229.6 133 84.2
BcaB02g08681 Brassica carinata HOM05D003169 ORTHO05D003700 7.0e-56 222.2 181 65.2
Oeu032680.1 Olea europaea HOM05D003169 ORTHO05D003700 1.1e-51 208.4 128 79.7
TPR.G14822 Trifolium pratense HOM05D003169 ORTHO05D003700 1.7e-49 201.1 254 46.5
MCO16G570 Micromonas commoda HOM05D003169 ORTHO05D003700 3.7e-49 199.9 403 35.2
Thhalv10000653m.g Eutrema salsugineum HOM05D003169 ORTHO05D003700 2.3e-46 190.7 168 62.5
Nitab4.5_0009958g0020 Nicotiana tabacum HOM05D003169 ORTHO05D003700 7.3e-45 185.7 107 79.4
SEGI_09386 Sequoiadendron giganteum HOM05D003169 ORTHO05D003700 4.1e-40 169.9 127 63.0
Aqoxy1G03228 Aquilegia oxysepala HOM05D003169 ORTHO05D003700 6.0e-39 166.0 144 61.8
Cre13.g578501 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 7.8e-39 165.6 452 30.8
MCO01G648 Micromonas commoda HOM05D003169 ORTHO05D003700 3.3e-37 160.2 375 32.5
MBI18_g40795_MAGBIO Magnolia biondii HOM05D003169 ORTHO05D003700 2.1e-36 157.5 117 70.9
SEGI_14617 Sequoiadendron giganteum HOM05D003169 ORTHO05D003700 1.8e-35 154.5 132 58.3
SGA_v2.0_scaffold26G11263 Striga asiatica HOM05D003169 ORTHO05D003700 1.5e-34 151.4 111 70.3
Haze_26591 Corylus avellana HOM05D003169 ORTHO05D003700 2.2e-33 147.5 393 29.3
Cre02.g095045 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 8.4e-33 145.6 377 32.6
Cre01.g053250 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 5.1e-30 136.3 374 31.0
TPR.G40025 Trifolium pratense HOM05D003169 ORTHO05D003700 1.4e-27 128.3 98 61.2
Actinidia33339 Actinidia chinensis HOM05D003169 ORTHO05D003700 2.2e-25 120.9 91 65.9
PRCOL_00005992 Prasinoderma coloniale HOM05D003169 ORTHO05D003700 1.2e-23 115.2 251 33.1
Cre07.g350100 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 1.7e-22 111.3 440 24.5
TPR.G20402 Trifolium pratense HOM05D003169 ORTHO05D003700 1.1e-21 108.6 60 88.3
BolC2t09653H Brassica oleracea HOM05D003169 ORTHO05D015450 1.5e-21 108.2 90 64.4
BcaC03g15885 Brassica carinata HOM05D014255 ORTHO05D015450 4.3e-21 106.7 78 69.2
TPR.G19390 Trifolium pratense HOM05D003169 ORTHO05D003700 3.1e-19 100.5 70 72.9
TPR.G39754 Trifolium pratense HOM05D003169 ORTHO05D003700 5.8e-18 96.3 127 46.5
Dinv19571 Davidia involucrata HOM05D003169 ORTHO05D003700 2.2e-17 94.4 89 58.4
C02p36530 Brassica napus HOM05D003169 ORTHO05D015450 4.9e-17 93.2 82 62.2
TPR.G40298 Trifolium pratense HOM05D003169 ORTHO05D003700 1.8e-14 84.7 71 59.2
SEGI_25392 Sequoiadendron giganteum HOM05D003169 ORTHO05D003700 5.1e-14 83.2 84 47.6
TPR.G7301 Trifolium pratense HOM05D003169 ORTHO05D003700 8.7e-14 82.4 55 69.1
BcaB02g10945 Brassica carinata HOM05D000798 ORTHO05D003700 1.5e-10 71.6 50 68.0
BcaB02g10953 Brassica carinata HOM05D000798 ORTHO05D003700 1.5e-10 71.6 50 68.0
CARHR073010 Cardamine hirsuta HOM05D003169 ORTHO05D003700 4.5e-10 70.1 39 89.7
SEGI_01096 Sequoiadendron giganteum HOM05D003169 ORTHO05D003700 1.3e-06 58.5 52 50.0


User provided reference genes

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