Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029234.1 Olea europaea HOM05D011412 ORTHO05D009969 2.8e-157 558.5 274 100.0
Oeu029249.1 Olea europaea HOM05D011412 ORTHO05D009969 4.7e-104 381.7 257 77.0
Oeu029235.1 Olea europaea HOM05D011412 ORTHO05D009969 1.6e-67 260.4 134 96.3
Oeu034504.1 Olea europaea HOM05D011412 ORTHO05D009969 2.6e-46 189.9 104 88.5
Oeu032521.1 Olea europaea HOM05D011412 ORTHO05D009969 2.1e-43 180.3 272 43.0
Oeu032519.1 Olea europaea HOM05D011412 ORTHO05D009969 4.8e-40 169.1 270 41.9
Oeu045757.1 Olea europaea HOM05D011412 ORTHO05D009969 6.0e-35 152.1 164 53.0
Oeu014492.1 Olea europaea HOM05D011412 ORTHO05D009969 1.8e-23 114.0 113 52.2
Oeu031750.4 Olea europaea HOM05D041624 ORTHO05D009969 3.1e-23 113.2 125 48.0
Oeu048608.1 Olea europaea HOM05D041624 ORTHO05D009969 1.0e-21 108.2 126 49.2
Oeu048605.1 Olea europaea HOM05D041624 ORTHO05D009969 2.9e-21 106.7 126 48.4
Oeu051266.1 Olea europaea HOM05D011412 ORTHO05D009969 1.1e-20 104.8 108 47.2
Oeu033656.3 Olea europaea HOM05D005915 ORTHO05D007239 3.3e-17 93.2 98 55.1
Peaxi162Scf00011g00077 Petunia axillaris HOM05D009853 ORTHO05D009969 6.3e-16 89.0 125 40.0
Nitab4.5_0003774g0010 Nicotiana tabacum HOM05D038292 ORTHO05D009969 1.8e-15 87.4 115 40.0
PGSC0003DMG400026582 Solanum tuberosum HOM05D009853 ORTHO05D009969 1.8e-15 87.4 125 40.8
Dinv40186 Davidia involucrata HOM05D009853 ORTHO05D009969 2.4e-15 87.0 129 36.4
PGSC0003DMG400033092 Solanum tuberosum HOM05D009853 ORTHO05D009969 5.3e-15 85.9 125 40.8
PGSC0003DMG400024902 Solanum tuberosum HOM05D009853 ORTHO05D009969 1.2e-14 84.7 137 38.7
Nitab4.5_0000948g0200 Nicotiana tabacum HOM05D009853 ORTHO05D009969 3.4e-14 83.2 110 39.1
Nitab4.5_0029272g0020 Nicotiana tabacum HOM05D009853 ORTHO05D009969 3.4e-14 83.2 111 39.6
PGSC0003DMG400018623 Solanum tuberosum HOM05D013339 ORTHO05D009969 4.5e-14 82.8 127 38.6
PGSC0003DMG400026881 Solanum tuberosum HOM05D009853 ORTHO05D009969 4.5e-14 82.8 131 39.7
Actinidia20182 Actinidia chinensis HOM05D011412 ORTHO05D009969 7.7e-14 82.0 139 33.1
Rhsim08G0027100 Rhododendron simsii HOM05D011412 ORTHO05D009969 1.0e-13 81.6 124 39.5
PGSC0003DMG400016838 Solanum tuberosum HOM05D009853 ORTHO05D009969 1.3e-13 81.3 110 38.2
Sopen01g046240 Solanum pennellii HOM05D000600 ORTHO05D000432 1.7e-13 80.9 113 38.9
CAN.G798.34 Capsicum annuum HOM05D009853 ORTHO05D009969 3.8e-13 79.7 124 37.1
PGSC0003DMG400016835 Solanum tuberosum HOM05D009853 ORTHO05D009969 5.0e-13 79.3 124 35.5
Actinidia01760 Actinidia chinensis HOM05D006819 ORTHO05D008763 6.5e-13 79.0 116 36.2
Dinv30482 Davidia involucrata HOM05D009853 ORTHO05D009969 6.5e-13 79.0 121 34.7
Solyc05g013370.1 Solanum lycopersicum HOM05D013339 ORTHO05D009969 6.5e-13 79.0 120 39.2
Sopen01g046270 Solanum pennellii HOM05D000600 ORTHO05D000432 6.5e-13 79.0 111 38.7
Solyc06g071300.1 Solanum lycopersicum HOM05D009853 ORTHO05D009969 1.1e-12 78.2 125 36.8
PGSC0003DMG400007682 Solanum tuberosum HOM05D013339 ORTHO05D009969 1.1e-12 78.2 120 38.3
PGSC0003DMG400036234 Solanum tuberosum HOM05D009853 ORTHO05D009969 1.9e-12 77.4 124 37.1
CSS0020150 Camellia sinensis var. sinensis HOM05D013339 ORTHO05D009969 2.5e-12 77.0 129 36.4
Solyc01g103870.1 Solanum lycopersicum HOM05D009853 ORTHO05D009969 3.2e-12 76.6 111 37.8
Sopen05g008160 Solanum pennellii HOM05D013339 ORTHO05D009969 3.2e-12 76.6 118 39.0
CSS0039249 Camellia sinensis var. sinensis HOM05D013339 ORTHO05D009969 4.2e-12 76.3 134 34.3
CSS0026794 Camellia sinensis var. sinensis HOM05D013339 ORTHO05D009969 5.5e-12 75.9 135 35.6
vmacro23014 Vaccinium macrocarpon HOM05D011412 ORTHO05D009969 7.2e-12 75.5 148 33.8
Dinv38023 Davidia involucrata HOM05D011412 ORTHO05D009969 1.2e-11 74.7 129 32.6
CSS0003429 Camellia sinensis var. sinensis HOM05D013339 ORTHO05D009969 2.1e-11 73.9 134 33.6
Sopen06g027600 Solanum pennellii HOM05D009853 ORTHO05D009969 2.1e-11 73.9 133 33.8
CSS0019303 Camellia sinensis var. sinensis HOM05D009853 ORTHO05D009969 3.6e-11 73.2 61 50.8
Rhsim08G0215000 Rhododendron simsii HOM05D011412 ORTHO05D009969 7.9e-11 72.0 71 47.9
DCAR_007526 Daucus carota HOM05D009853 ORTHO05D009969 1.8e-10 70.9 90 38.9
CAN.G1238.8 Capsicum annuum HOM05D006716 ORTHO05D008396 2.3e-10 70.5 126 34.1
Manes.10G129900 Manihot esculenta HOM05D006887 ORTHO05D004325 2.3e-10 70.5 198 27.3
TAR365G0201 Trochodendron aralioides HOM05D000307 ORTHO05D000166 2.3e-10 70.5 68 44.1
Cpa.g.sc192.10 Carica papaya HOM05D006887 ORTHO05D004325 3.0e-10 70.1 83 41.0
Rhsim07G0189200 Rhododendron simsii HOM05D009853 ORTHO05D009969 3.0e-10 70.1 63 46.0
Haze_14940 Corylus avellana HOM05D006887 ORTHO05D009969 3.9e-10 69.7 128 32.8
CSS0013985 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 1.5e-09 67.8 128 32.8
Cfa007171 Carpinus fangiana HOM05D006887 ORTHO05D009969 1.5e-09 67.8 136 32.4
BcaB06g27670 Brassica carinata HOM05D006887 ORTHO05D004325 2.6e-09 67.0 56 48.2
Cfa015195 Carpinus fangiana HOM05D006887 ORTHO05D009969 2.6e-09 67.0 129 27.1
Nitab4.5_0002698g0090 Nicotiana tabacum HOM05D009853 ORTHO05D009969 2.6e-09 67.0 97 36.1
Atru.chr6.1689 Acer truncatum HOM05D006887 ORTHO05D009969 3.3e-09 66.6 106 38.7
Oeu027342.1 Olea europaea HOM05D001495 ORTHO05D001391 4.4e-09 66.2 69 56.5
CSS0048320 Camellia sinensis var. sinensis HOM05D013339 ORTHO05D009969 5.7e-09 65.9 136 30.1
THA.LOC104801949 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 9.7e-09 65.1 71 42.3
THA.LOC104801951 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 9.7e-09 65.1 71 42.3
THA.LOC104825360 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 9.7e-09 65.1 71 42.3
CSS0047056 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 1.3e-08 64.7 155 30.3
Haze_01459 Corylus avellana HOM05D006887 ORTHO05D009969 1.7e-08 64.3 145 25.5
TWI56G0608 Tripterygium wilfordii HOM05D062112 ORTHO05D009969 1.7e-08 64.3 131 32.1
AT5G39810 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 2.2e-08 63.9 117 33.3
Cpa.g.sc365.3 Carica papaya HOM05D006887 ORTHO05D009969 2.8e-08 63.5 114 33.3
PGSC0003DMG400035438 Solanum tuberosum HOM05D009853 ORTHO05D009969 2.8e-08 63.5 101 33.7
AL7G49930 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 4.8e-08 62.8 155 32.3
CSS0025868 Camellia sinensis var. sinensis HOM05D013339 ORTHO05D009969 4.8e-08 62.8 127 28.3
Rhsim08G0003700 Rhododendron simsii HOM05D000307 ORTHO05D000166 4.8e-08 62.8 156 25.6
THA.LOC104805962 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 4.8e-08 62.8 130 33.1
BcaNung06274 Brassica carinata HOM05D007946 ORTHO05D004325 6.3e-08 62.4 137 30.7
Rhsim04G0216100 Rhododendron simsii HOM05D011412 ORTHO05D009969 6.3e-08 62.4 112 30.4
A06p04090 Brassica napus HOM05D007946 ORTHO05D004325 8.2e-08 62.0 164 28.0
PGSC0003DMG400039282 Solanum tuberosum HOM05D009853 ORTHO05D009969 8.2e-08 62.0 96 33.3
Thhalv10028184m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 1.1e-07 61.6 70 40.0
Peaxi162Scf01312g00064 Petunia axillaris HOM05D000628 ORTHO05D009969 1.1e-07 61.6 63 49.2
Nitab4.5_0000365g0070 Nicotiana tabacum HOM05D000307 ORTHO05D000166 1.4e-07 61.2 109 33.9
AL7G50550 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 1.8e-07 60.8 155 31.6
Nitab4.5_0007355g0010 Nicotiana tabacum HOM05D000307 ORTHO05D000166 1.8e-07 60.8 109 34.9
BcaB06g27671 Brassica carinata HOM05D006887 ORTHO05D004325 2.4e-07 60.5 106 31.1
CSS0029060 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 2.4e-07 60.5 165 29.1
THA.LOC104810872 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 2.4e-07 60.5 130 32.3
Aqoxy5G00368 Aquilegia oxysepala HOM05D000307 ORTHO05D000166 3.1e-07 60.1 72 47.2
QL10p050899 Quercus lobata HOM05D006887 ORTHO05D009969 3.1e-07 60.1 66 37.9
CSS0000924 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 4.1e-07 59.7 76 35.5
Nitab4.5_0000167g0220 Nicotiana tabacum HOM05D000307 ORTHO05D000166 4.1e-07 59.7 109 33.9
TAR625G0022 Trochodendron aralioides HOM05D000307 ORTHO05D000166 4.1e-07 59.7 157 28.0
BcaB06g27414 Brassica carinata HOM05D006887 ORTHO05D004325 5.3e-07 59.3 104 32.7
BcaC08g43062 Brassica carinata HOM05D007946 ORTHO05D004325 5.3e-07 59.3 138 29.7
C06p03210 Brassica napus HOM05D007946 ORTHO05D004325 5.3e-07 59.3 138 29.7
ClCG05G012100 Citrullus lanatus HOM05D000307 ORTHO05D000166 5.3e-07 59.3 138 29.7
Thhalv10028282m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 5.3e-07 59.3 69 40.6
CSS0020566 Camellia sinensis var. sinensis HOM05D013339 ORTHO05D009969 6.9e-07 58.9 117 31.6
CSS0028822 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 6.9e-07 58.9 76 35.5
CSS0029498 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 6.9e-07 58.9 155 28.4
CSS0034462 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 6.9e-07 58.9 76 35.5
Actinidia23430 Actinidia chinensis HOM05D006887 ORTHO05D009969 9.1e-07 58.5 126 25.4
AL7G50480 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 9.1e-07 58.5 155 31.0
CSS0003566 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 9.1e-07 58.5 76 35.5
CSS0008018 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 9.1e-07 58.5 76 35.5
CSS0019629 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 9.1e-07 58.5 76 35.5
MBI16_g16371_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 9.1e-07 58.5 145 33.1
Nitab4.5_0000075g0290 Nicotiana tabacum HOM05D009853 ORTHO05D009969 9.1e-07 58.5 38 57.9
Lj1C1007T18 Lonicera japonica HOM05D000307 ORTHO05D000166 1.2e-06 58.2 71 40.8
Potri.004G222200 Populus trichocarpa HOM05D006887 ORTHO05D009969 1.2e-06 58.2 60 43.3
Sp3g16720 Schrenkiella parvula HOM05D006887 ORTHO05D004325 1.2e-06 58.2 67 37.3
TWI14G1072 Tripterygium wilfordii HOM05D062112 ORTHO05D009969 1.2e-06 58.2 70 38.6
TAR625G0700 Trochodendron aralioides HOM05D000307 ORTHO05D000166 1.2e-06 58.2 73 38.4
CSS0012311 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 1.5e-06 57.8 76 34.2
HanXRQChr15g0479251 Helianthus annuus HOM05D000307 ORTHO05D000166 1.5e-06 57.8 58 43.1
Oeu050185.1 Olea europaea HOM05D011412 ORTHO05D009969 1.5e-06 57.8 56 48.2
BcaB08g34810 Brassica carinata HOM05D006887 ORTHO05D004325 2.0e-06 57.4 53 43.4
AT5G38740 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 2.6e-06 57.0 140 27.9
BcaB06g27442 Brassica carinata HOM05D006887 ORTHO05D004325 2.6e-06 57.0 53 43.4
CSS0020770 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 2.6e-06 57.0 75 38.7
CANSAT25G2697 Cannabis sativa HOM05D000307 ORTHO05D000166 2.6e-06 57.0 69 39.1
CARHR094030 Cardamine hirsuta HOM05D006887 ORTHO05D004325 2.6e-06 57.0 70 34.3
Potri.015G077800 Populus trichocarpa HOM05D006887 ORTHO05D009969 2.6e-06 57.0 62 41.9
Sabra10G0187100 Salix brachista HOM05D015295 ORTHO05D009969 2.6e-06 57.0 75 37.3
TWI60G0236 Tripterygium wilfordii HOM05D000307 ORTHO05D000166 2.6e-06 57.0 73 41.1
BcaB04g20759 Brassica carinata HOM05D006887 ORTHO05D004325 3.4e-06 56.6 69 36.2
BcaB06g27440 Brassica carinata HOM05D006887 ORTHO05D004325 3.4e-06 56.6 55 43.6
HanXRQChr15g0479261 Helianthus annuus HOM05D000307 ORTHO05D000166 3.4e-06 56.6 81 35.8
HanXRQChr15g0479301 Helianthus annuus HOM05D000307 ORTHO05D000166 3.4e-06 56.6 81 35.8
Potri.010G238900 Populus trichocarpa HOM05D015295 ORTHO05D009969 3.4e-06 56.6 67 37.3
Prupe.6G121600 Prunus persica HOM05D020328 ORTHO05D030515 3.4e-06 56.6 63 38.1
TPR.G26403 Trifolium pratense HOM05D008089 ORTHO05D000166 3.4e-06 56.6 77 40.3
Atru.chr8.2490 Acer truncatum HOM05D000307 ORTHO05D000166 4.5e-06 56.2 66 40.9
Actinidia09597 Actinidia chinensis HOM05D002537 ORTHO05D002751 4.5e-06 56.2 73 38.4
A04p12980 Brassica napus HOM05D006887 ORTHO05D004325 4.5e-06 56.2 85 32.9
BraA04t16959Z Brassica rapa HOM05D006887 ORTHO05D004325 4.5e-06 56.2 280 21.1
Prupe.3G148900 Prunus persica HOM05D000307 ORTHO05D000166 4.5e-06 56.2 76 35.5
THA.LOC104806918 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 4.5e-06 56.2 90 33.3
AT5G40220 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 5.9e-06 55.8 141 26.2
AT5G41200 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 5.9e-06 55.8 87 34.5
Sopen11g010690 Solanum pennellii HOM05D000307 ORTHO05D000166 5.9e-06 55.8 59 40.7
BcaB04g18996 Brassica carinata HOM05D006887 ORTHO05D004325 7.7e-06 55.5 70 35.7
BcaB06g27394 Brassica carinata HOM05D006887 ORTHO05D004325 7.7e-06 55.5 93 32.3
A04p13000 Brassica napus HOM05D006887 ORTHO05D004325 7.7e-06 55.5 133 27.1
AUR62002527 Chenopodium quinoa HOM05D000307 ORTHO05D000166 7.7e-06 55.5 85 35.3
Potri.008G020300 Populus trichocarpa HOM05D015295 ORTHO05D009969 7.7e-06 55.5 58 39.7
QL06p031925 Quercus lobata HOM05D000307 ORTHO05D000166 7.7e-06 55.5 73 34.2
Sabra15G0102400 Salix brachista HOM05D006887 ORTHO05D009969 7.7e-06 55.5 62 40.3
SGA_v2.0_scaffold304G47921 Striga asiatica HOM05D000307 ORTHO05D000166 7.7e-06 55.5 67 37.3


User provided reference genes

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